Clavibacter michiganensis subsp. michiganensis: CMM_2109
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Entry
CMM_2109 CDS
T00529
Symbol
lacZ
Name
(GenBank) beta-galactosidase
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
cmi
Clavibacter michiganensis subsp. michiganensis
Pathway
cmi00052
Galactose metabolism
cmi00511
Other glycan degradation
cmi00600
Sphingolipid metabolism
cmi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cmi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
CMM_2109 (lacZ)
09103 Lipid metabolism
00600 Sphingolipid metabolism
CMM_2109 (lacZ)
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
CMM_2109 (lacZ)
Enzymes [BR:
cmi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
CMM_2109 (lacZ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
LacZ_4
Glyco_hydro_2_N2
Glyco_hydro_2
BetaGal_ABD2
BetaGal_gal-bd
Motif
Other DBs
NCBI-ProteinID:
CAN02178
UniProt:
A5CSV4
LinkDB
All DBs
Position
2379114..2382167
Genome browser
AA seq
1017 aa
AA seq
DB search
MTHALPYFEDFAPTTGAARRPRSCLHSDAPRIVLNGDWRFRLSPTPRGLSDEMADPAFDD
SGWDEIPVPSHWVLGQDGRFGLPAYTNVQYPFPVEPPFVPDENPTGDYRVEVDVPTDWQS
LERVVLRFEGVESAFKVWLNGEEVGTAMGSRLSHEFDVTASLRPGSNVLAVRVHQWSIAS
YLEDQDQWWMPGIFRDVTLLGRPEGGIDDAWTRAEYDHETGAGTVHVEVDAEPTAFPVTF
EVDGLGIHVTWDTPADVAPVHVDRVEPWSAESPTQYQGFLRTNVEALSIRLGFRTVRIEG
DRFLVNGRRVVFHGVNRHEAHPERGRVFDEEHARADMLLMKQHNVNAIRTSHYPPHPRVL
DLADELGFWVIDECDLETHGFEFGGWVGNPSDDPRFADHYLDRIERTIERDKNHPSIVMW
SLGNESGTGRNLAAMSAWVHRRDPGRPVHYEGDYTGEYTDVYSRMYSNLQETESIGSDVI
PGDLLGCTPGEGMRQRTKPFILCEYVHAMGNGPGQIGEYEDLVLRYPRLHGGFVWEWRDH
GILTETADGEAFYAYGGDFGEVVHDGNFVMDGMVLPDDTPTPGLAEYKAVVQPIAFGLER
DGGSASLVVENRYHSVSTALTSLVWVLAVDGDDVATGVLDAEAVPAGDTARIPLPADALD
AGELAGDGSEVWLTVQAILRDDEPWAEAGHVVAVQQFDLTPAPRPAVPARWVDADEETYP
ASGATRLTLGDGEFDLATGRLVRLGSLEVDGPRLELWRAPTDNDRSDSSGSYELADPRLT
FGKGVPGPSSEARWRGAGLDRLTHRVRSVKVGSGSLTVVVRTSAAQSFDSVDTTYCWTEG
ADGDLDLRVDIVPSAGWAITWPRVGIRFDLPASVTNAEWFGTGPFESYPDSRRAALVGRF
SSLVDDLGAVYSMPQETGHRSDLRELELGTFDGEDGIVIQARPDTAGRRPGFTASRHTPQ
ELDRAAHPHELPASEAVHLYIDAAQHGLGSRACGLDVLPEHQLWPSARTLELTIRSR
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgacgcacgccctcccctacttcgaggacttcgcccccacgacgggcgccgcccgccgc
ccccgttcctgcctgcactcggatgccccgcgcatcgtgctgaacggcgactggcggttc
cgcctctcccccaccccgcgcggcctctccgacgagatggccgaccccgcgttcgacgac
tccggctgggacgagatccccgtgccgagccactgggtgctcggccaggacggccgcttc
ggcctccccgcctacacgaacgtgcagtacccgttccccgtcgagccgcccttcgtgccg
gacgagaaccccacgggcgactaccgcgtcgaggtcgacgtgcccacggactggcagtcg
ctcgagcgcgtcgtgctccggttcgagggcgtcgagtcggcgttcaaggtgtggctgaac
ggcgaggaggtcggcaccgcgatgggatcccgcctctcgcacgagttcgacgtcaccgcg
tcgctccgccccggatccaacgtgctcgccgtgcgcgtgcaccagtggtcgatcgccagc
tacctcgaggaccaggaccagtggtggatgcccggcatcttccgtgacgtcaccctcctc
ggccgtcccgagggcggcatcgacgacgcgtggacccgcgccgagtacgaccacgagacg
ggcgcgggcacggtgcacgtcgaggtcgacgccgagccgaccgcgttccccgtcacgttc
gaggtcgatggcctcgggatccacgtcacatgggacaccccggccgacgtcgcgcccgtg
cacgtcgaccgcgtcgagccgtggagcgccgagagccccacgcagtaccagggcttcctc
cgcaccaacgtcgaggcgctctccatccgcctcggcttccgcaccgtgcgcatcgagggc
gaccggttcctcgtcaacggccgccgcgtcgtcttccacggcgtcaaccggcacgaggcc
caccccgagcgcggccgcgtcttcgacgaggagcacgcgcgcgccgacatgctgctgatg
aagcagcacaacgtcaacgcgatccgcaccagccactacccgccgcacccccgcgtgctc
gacctcgccgacgagctcggcttctgggtcatcgacgagtgcgacctcgagacccacggc
ttcgagttcggcggctgggtcggcaacccgagcgacgacccgcgcttcgccgaccactac
ctcgaccggatcgagcgcacgatcgagcgggacaagaaccacccctcgatcgtcatgtgg
tcgctcggcaacgagtcgggcacggggcgcaacctcgccgcgatgtcggcttgggtccac
cgccgcgacccgggccgccccgtgcactacgagggcgactacacgggcgagtacacggac
gtctactcgcgcatgtactcgaacctgcaggagacggagtccatcggcagcgacgtgatc
ccgggcgacctgctcggctgcacgcccggcgagggcatgcgccagcgcaccaagcccttc
atcctctgcgagtacgtgcacgcgatgggcaacggccccggccagatcggcgagtacgag
gacctcgtgctccgctacccgcgcctccacggcggcttcgtgtgggagtggcgcgaccac
ggcatcctcaccgagacagcggacggcgaggcgttctacgcctacggcggcgacttcggc
gaggtcgtgcacgacggcaacttcgtgatggacggcatggtcctgcccgacgacaccccc
acgcccggcctcgccgagtacaaggccgtcgtgcagcccatcgcgttcgggctcgagcgc
gacggcggatccgcgtccctcgtggtcgagaaccgctaccactccgtctccaccgcgctc
acgagcctcgtctgggtgctcgcggtcgacggcgacgacgtggcgaccggggtcctggac
gccgaggccgtcccggccggcgacaccgcgcggatcccgctgcccgccgacgcgctcgac
gcgggcgagctggccggcgacggctccgaggtgtggctgaccgtgcaggcgatcctccgc
gacgacgagccgtgggccgaggccggccacgtggtcgccgtgcagcagttcgacctcacg
ccggcgccgcggcccgccgtgcccgcgcgctgggtcgacgccgacgaggagacgtacccc
gcgtccggcgccacgcgcctcaccctcggcgacggcgagttcgacctcgccaccggccgc
ctcgtgcgactcggctcgctcgaggtcgacggaccgcggctggagctgtggcgcgcgccc
accgacaacgaccgcagcgacagcagcggctcctacgagctggcggatccgcgtctcacc
ttcggcaagggcgtccccggcccgtcgagcgaggcacgctggcgcggcgcgggcctcgac
cggctgacgcaccgggtccgctcggtgaaggtcggctccggctcgctcacggtcgtcgtg
cgcacgagcgcggcgcagtccttcgactcggtcgacacgacgtactgctggaccgagggc
gccgacggcgacctggacctccgcgtcgacatcgtgccgagcgccggctgggccatcacc
tggccgcgcgtcgggatccgcttcgacctgcccgcgagcgtcaccaacgcggagtggttc
ggcaccgggcccttcgagtcgtaccccgactctcgccgcgcggcgctcgtcggccggttc
tcgtcgctcgtcgacgacctgggcgccgtctactcgatgccccaggagaccggccaccgc
agcgacctgcgcgagctcgagctcggcacgttcgacggcgaggacggcatcgtgatccag
gcccggcccgacaccgcgggccgccgccccggtttcacggcctcgcgccacacgccgcag
gagctcgaccgcgccgcgcacccgcacgagctgcccgccagcgaggcggtgcacctctac
atcgacgccgcgcagcacgggctcggctcgcgcgcgtgcggcctcgacgtgctgcccgag
caccagctgtggccgtcggcgcgcacgctggagctcaccatccgcagccgctga
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