Clavibacter michiganensis subsp. michiganensis: CMM_2522
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Entry
CMM_2522 CDS
T00529
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cmi
Clavibacter michiganensis subsp. michiganensis
Pathway
cmi00260
Glycine, serine and threonine metabolism
cmi00460
Cyanoamino acid metabolism
cmi00630
Glyoxylate and dicarboxylate metabolism
cmi00670
One carbon pool by folate
cmi00680
Methane metabolism
cmi01100
Metabolic pathways
cmi01110
Biosynthesis of secondary metabolites
cmi01120
Microbial metabolism in diverse environments
cmi01200
Carbon metabolism
cmi01230
Biosynthesis of amino acids
cmi01240
Biosynthesis of cofactors
cmi04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
cmi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CMM_2522 (glyA)
09102 Energy metabolism
00680 Methane metabolism
CMM_2522 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CMM_2522 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CMM_2522 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CMM_2522 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CMM_2522 (glyA)
Enzymes [BR:
cmi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CMM_2522 (glyA)
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
CAN02604
UniProt:
A5CU18
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All DBs
Position
complement(2836937..2838214)
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AA seq
425 aa
AA seq
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MPVDQSFNAPLSEVDPEIAAVLEQELGRQRGTLEMIASENFVPRAVLQSQGSVLTNKYAE
GYPGRRYYGGCEFVDVAEQLAIDRAKSLFGAEFANVQPHSGATANAAVLAAIAQPGDMIL
GLELAHGGHLTHGMKLNFSGKLYDAAAYGVDPDTFLIDMDVVREKALAHRPQVIIAGWSA
YPRHLDFAAFRSIADEVGAKLWVDMAHFAGLVAAGVHPSPVPYADVVSSTVHKTLAGPRS
GVILSRDTALAKKLNSAVFPGQQGGPLMHVIAAKATAFKIAATEEFADRQRRTIQGAQIL
AERLVAADSTEAGVSVLTGGTDVHLVLADLRNSPIDGKQAEDALHEVGITVNRNSVPFDP
RPPMVTSGVRIGTSALATRGFGETEFTEVADIIAETLKPDSDLAALRARVLTLTDGFPLY
EGLTQ
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcgaccagtccttcaacgcccccctctccgaggtcgacccggagatcgcggcc
gtcctcgagcaggagctcgggcgtcagcgcggcaccctcgagatgatcgcgagcgagaac
ttcgtgccgcgcgcggtgctgcagtcgcagggatccgtgctcacgaacaagtacgcggag
ggctacccgggccgccgctactacggcggctgcgagttcgtcgacgtggccgagcagctc
gccatcgaccgcgcgaagagcctcttcggcgccgagttcgcgaacgtccagccgcactcg
ggcgccaccgccaacgccgccgtcctcgccgccatcgcgcagcccggcgacatgatcctc
ggcctcgagctcgcgcacggcggccacctcacgcacggcatgaagctcaacttctccggc
aagctctacgacgcggcggcgtacggcgtcgatcccgacaccttcctcatcgacatggac
gtcgtgcgcgagaaggcgctcgcgcaccgcccgcaggtcatcatcgcgggctggtcggcg
tacccccgccacctcgacttcgccgcgttccggtcgatcgccgacgaggtcggcgcgaag
ctctgggtcgacatggcgcacttcgcgggcctcgtggccgcgggcgtgcacccctcgccc
gtcccgtacgcggacgtcgtctcctccaccgtgcacaagaccctcgcgggcccccggtcc
ggcgtgatcctcagccgcgacaccgcgctcgccaagaagctcaactcggccgtgttcccg
ggccagcagggcggcccgctcatgcacgtcatcgcggccaaggccacggcgttcaagatc
gcggccaccgaggagttcgcggaccgccagcgccgcaccatccagggcgcgcagatcctc
gccgagcgcctcgtcgcggccgactccaccgaggccggcgtctcggtcctcacgggcggc
acggacgtgcacctcgtgctcgcggatctgcggaactcgcccatcgacggcaagcaggcg
gaggacgcgctgcacgaggtcggcatcacggtcaaccgcaactcggtgccgttcgacccg
cgcccgccgatggtcacctccggcgtccgcatcggcacgtccgcgctcgcgacccgcggc
ttcggcgagaccgagttcacggaggtggcggacatcatcgccgagaccctgaagcccgac
agcgacctcgccgccctgcgtgcgcgcgtgctcacgctcaccgacggcttcccgctctac
gagggcctcacccagtga
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