Catenibacterium mitsuokai: NQ499_09255
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Entry
NQ499_09255 CDS
T08440
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
cmit
Catenibacterium mitsuokai
Pathway
cmit03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NQ499_09255 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmit03019
]
NQ499_09255 (rny)
Messenger RNA biogenesis [BR:
cmit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NQ499_09255 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_PNO1_2nd
HDOD
KH_KhpA-B
KH-I_KHDC4-BBP
KH_2
KH_NusA_2nd
Exonuc_VII_L
CTD9
Motif
Other DBs
NCBI-ProteinID:
UWO52438
LinkDB
All DBs
Position
complement(1770643..1772190)
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AA seq
515 aa
AA seq
DB search
MSLIKVLTYVLVFLLGIGCYCLYIRLKISKANTDAKTIVEEANTKADNLIKEATLDAKTK
AYEYKLEAEKEAKQQRLELTKFENKLLQREQNIDRRDISLQGKEDALEARSQQLNKKKAE
LEVKEEKLQHQIDEKVAELEKIAAMSAQEAKAELFKQVEQRMETEVTAYIKEQEDEAKTK
ASLFAKDIIANALNRYSQEEVIERTVSVVALPSEEMKGRIIGREGRNIKAIENATGVDLI
IDDTPEVITLSCFDPIRREVARLSLETLIHDGRIQPGRIEEVVAKTKKDLDDTILKAGQD
AVFELGLSRMNKELVMMIGKLKYRTSYGQNALQHSLEVAHFAGIMAAELGLNQQLAKRAG
LLHDLGKAVDHEMEGSHVELGAKFAKKFGENATVINAIESHHGDVPATSIIAVLISAADT
LSAARPGSRSEKIENYIQRLEKLEELPKQFDGVDKVFAIQAGREIRVIVNPEKIDDLKAH
KLARDVKEKIETELTYPGHIKVTVIREIRANEIAK
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgagcttaattaaagtcttgacctatgttcttgtatttcttttaggtataggatgttat
tgtctatatatccgtttaaaaatttctaaagcaaatacagatgccaaaacaattgttgaa
gaagctaatacaaaagcagacaatctaattaaagaagcaacgcttgatgcaaaaacaaaa
gcttatgaatataagcttgaagctgaaaaagaagcaaagcagcagcgcttagaattgact
aagtttgaaaataagctattacaacgtgaacagaacatcgaccgtagagatatttcttta
caggggaaggaagatgctcttgaagcaagaagccaacaattaaataagaaaaaggcggaa
ctagaggtcaaggaagaaaaactacagcatcagattgatgaaaaagtagccgaacttgaa
aaaattgcagcaatgtctgcacaggaagcaaaagctgaactcttcaagcaggtagaacag
cgtatggagactgaagtcactgcttatatcaaagaacaggaagatgaagcaaaaacaaag
gcttcactattcgcaaaagatattattgcgaatgcccttaatcgttattctcaggaagaa
gtcattgaacgcacagtcagtgtagttgctcttccaagtgaagaaatgaaaggtcgtatt
attggccgtgaaggtcgtaatattaaagcaattgaaaatgcaactggtgtagatttgatt
attgatgatactccagaagtgattacattatcatgttttgatccaattcgtcgtgaagtg
gcacgtttatcacttgaaacattaattcatgatggacgtattcagccaggacgtattgag
gaagttgtcgctaagactaaaaaagatcttgatgatactattttaaaggcagggcaggat
gctgtctttgaattaggattatctagaatgaataaagaacttgttatgatgattggtaag
ttgaaatatcgtacaagttatggacagaatgctttacagcattcattagaagtggctcat
tttgccggtattatggccgctgaacttggattaaatcagcagcttgctaaacgtgctggt
ttattgcatgacttaggaaaagcagttgaccatgaaatggaaggaagtcacgttgaatta
ggtgcaaaattcgctaagaaatttggtgaaaatgcgactgtaatcaatgcgattgaatca
catcatggagatgttccagcaacatcaattattgcagtactgatctctgcagcagatacg
ttatcagctgctagacctggtagtagaagtgaaaaaattgaaaattatatccagagactt
gaaaaacttgaagaattacctaaacagtttgacggtgtggataaggtatttgccatccag
gcaggtcgtgaaatcagagtaatcgttaatccagaaaagattgatgacttaaaagcacat
aaacttgcaagagatgtcaaagaaaagattgaaaccgaactcacttacccaggacatatt
aaagtaactgtgatccgtgagattcgtgctaatgaaatagctaagtag
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