Callorhinchus milii (elephant shark): 103177409
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Entry
103177409 CDS
T03088
Symbol
rb1
Name
(RefSeq) retinoblastoma-associated protein isoform X1
KO
K06618
retinoblastoma-associated protein
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04110
Cell cycle
cmk04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
103177409 (rb1)
04218 Cellular senescence
103177409 (rb1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cmk01009
]
103177409 (rb1)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmk03000
]
103177409 (rb1)
Protein phosphatases and associated proteins [BR:
cmk01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103177409 (rb1)
Transcription factors [BR:
cmk03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
103177409 (rb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rb_C
RB_A
RB_B
DUF3452
DUF1955
Motif
Other DBs
NCBI-GeneID:
103177409
NCBI-ProteinID:
XP_042190112
LinkDB
All DBs
Position
Unknown
AA seq
928 aa
AA seq
DB search
MPPKKASASDPEERVSPAVGGSPGAAAVGRNDHKYTDFILLCQSLMVEENVIERAWRIWE
SVSTFLDEAFAPDVIRKHWGICIFIASVDLDTVSFTLTELQKKLDMSLADFLQSLKRVDV
NVDTVSTKVNSVVEKLETKYFVFSVLYNKFERTCEKIFEEAPQNNRDSSEINSKSMLKIC
WITFLLAAGKALQMEDNLVLSFQLLLCVLEHFIKFSPPSMLKEPYKTAVSSLNSITPSRP
LRRSQSKAIQAIVSPDVDPKVVEILCKENECNVDEVKNIYIRTFLPFMDTIKISASNAIP
ELEEVSRKYEALYLRNKDFDGRLFLEHDKTLEADQEEGSGAERTPKKIDNKDSHLIVPPQ
TPVRTAMSTIQQLKMILNSANDKPSDTLVKYFNNCTVNPTSDILERVKNLGEEFQRQFAQ
AVGKGWADIGFERYRLGVRLYYRVMESMLKSEEERLSVQNFSKLLNNDAFHISLLSCAVE
VVMTTYGTTWKRGIQQETCLSFPWILSVFDIKAYEFYKIIESFIKAEQNLTRDMIKHLER
CEHRIMESLAWQSGSPLFDVLRQQKEQEEQPEQPEPTINLNQPLQHSHTAADLYLSPIRS
PRKRGSNSVHANPVQGAEIEAASSGQLHPLAQAQLQKSQKSTSLSLFYKKVYRLAYLRLN
TLCNKLHLLTEYPQLEPVIWTLFQHALQNEYDLMRDRHLDQIMMCSMYAICKVKNYFQLL
FKTIVTAYKDLPNTNQETFKKVLIREGQSDSIIGFYNVVFMQTLKTNILQYASPRPPTLS
PIPHIPRNQFGFPNSPIRVPVGNIYVSPLKSSYKADGLLSPHKMTPRTRFLVSIGESFGT
PEKFQKINQLVNSSDRQLKRAGDMGSVPKPLKRLRFDMDGQDEADGGKHSPGESKLLQQK
IAEMTSTRNKMQEQKKKNGNDVVKKEEN
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgccacccaagaaggcctcggcttccgacccggaggagagggtatctccagctgtgggt
ggttcccccggtgccgccgctgtgggaagaaatgaccacaaatatacagactttatcttg
ttatgtcaaagtcttatggtggaagagaatgtaatcgagagggcttggcggatctgggag
tcggtgtcgacctttttggatgaggcctttgcaccagatgtgatcaggaagcattggggt
atttgtatctttattgcatccgtagatctggatacagtttccttcactttgacagaatta
cagaagaagttggatatgagtttggctgactttcttcagtcgttgaagagagttgatgtg
aacgtggacactgtaagcactaaagtaaattcagtggtggaaaagctggaaacgaagtac
tttgttttttctgtgctctataacaaatttgaaaggacatgtgaaaaaatatttgaggag
gcgccacaaaacaacagagactcatcagaaattaattcaaaatcgatgttgaaaatctgt
tggatcacctttctactggcagcaggaaaggcactgcagatggaagataacctagtcctc
tctttccaattgttactttgcgtcttggagcactttatcaagttttcacctccttcgatg
ctaaaggagccttacaagactgctgtgagttctctaaattccattaccccatcacgacct
ttaagacgaagtcagagcaaggctatccaagcaattgtttcacctgatgtggatcctaag
gttgtggaaatcctttgtaaggaaaatgaatgtaacgttgatgaggtgaaaaacatttat
attaggacttttcttccttttatggatacaattaaaatatctgcttctaatgcgattcct
gagcttgaagaagtgtcaagaaaatatgaagcactttaccttagaaacaaagactttgat
ggaagattgttccttgaacatgacaaaactctggaggcagaccaagaagaaggctctgga
gcggaaagaacgcccaagaaaattgacaataaagacagtcatttgattgtcccaccacag
actcctgttaggactgcaatgagcacaatccagcagttaaaaatgatcttgaattcagcc
aatgacaaaccctcggatacacttgttaaatacttcaataattgtacagtgaaccctacc
agtgacatcttagagagagtgaaaaatcttggtgaggaatttcaacggcaatttgctcaa
gctgtagggaaaggatgggcagatattggctttgagcgatacagacttggggtccggcta
tactacagggttatggaatccatgctgaaatcggaagaggagcgtctctctgttcagaat
tttagcaagttgctaaacaatgatgcctttcatatatctctactttcctgtgctgtggag
gttgtgatgacgacatatggtactacatggaagagaggcattcaacaagaaacttgcctt
tctttcccctggatcctcagtgtttttgatataaaggcatatgaattttacaagattatt
gagagctttatcaaagcagaacaaaatctaacgagagatatgatcaagcacctggaaaga
tgtgaacacaggatcatggaatctcttgcttggcagtcgggttcacctttgtttgatgtt
ctaaggcaacaaaaagaacaggaagagcaaccagaacaacctgaacctaccattaatctc
aatcaaccactccagcacagccacactgctgcagacctctatctttcccctatcagatct
cctcggaaaagagggtccaatagtgtgcatgcaaatcccgtacaaggtgcagaaattgag
gcagcatcttctggtcaacttcatccgctggctcaggcacagcttcaaaaatctcagaaa
tctacctcactctcccttttctacaaaaaagtttatcgactggcatatcttcggctaaac
actctctgcaacaaacttcacctactgactgagtaccctcaactggaaccagtaatatgg
actctttttcaacacgcgttgcagaatgagtatgacctcatgagagacagacatttggac
cagataatgatgtgttccatgtatgccatttgtaaggtgaagaactattttcaactattg
ttcaaaactattgttactgcctacaaggatttgccaaacacaaatcaagagactttcaaa
aaagtgctgatcagagagggacaaagtgactcaattattggcttctacaatgtggtgttc
atgcagacgttgaaaacgaacatcctgcaatatgcttcacccaggccaccaacactatca
ccaattcctcatatccctcgaaatcaatttggttttccaaattctccaatacgtgtgcca
gttggcaacatctatgtatctccactgaagagttcgtacaaagctgatggactgctctcc
ccacacaaaatgacaccaagaacacgattcttggtgtccattggtgaatcatttgggaca
ccagaaaaatttcagaagatcaaccagttggtgaactccagcgatcgccaattgaagcgt
gctggggacatggggagtgttccaaaacctctgaagagacttcgtttcgatatggatgga
caggatgaagcagacggcggcaaacactcacctggagaatccaaactgctgcagcagaag
attgctgaaatgacatccacaaggaataaaatgcaagaacaaaaaaagaaaaacggcaat
gatgttgtgaagaaggaagaaaattga
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