Callorhinchus milii (elephant shark): 103178379
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Entry
103178379 CDS
T03088
Symbol
ttc37
Name
(RefSeq) LOW QUALITY PROTEIN: tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103178379 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmk03019
]
103178379 (ttc37)
Messenger RNA biogenesis [BR:
cmk03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
103178379 (ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_CcmH_CycH
TPR_14
TPR_16
TPR_11
TPR_8
TPR_17
TPR_12
TPR_9
ANAPC3
ARM_TT21_C
DUF627
Fis1_TPR_C
TPR_20
PPTA
HAT_PRP39_N
TPR_30
TPR_7
Motif
Other DBs
NCBI-GeneID:
103178379
NCBI-ProteinID:
XP_042190230
LinkDB
All DBs
Position
Unknown
AA seq
1566 aa
AA seq
DB search
MSSKEVKIVLKSAREAIRNKEYKEALKHCKAVLKQDKNNYNAWVFIGVAAAELEQLDQAK
TAYKKAAELEPDQLLAWQGLVNLYEKNNLSDCKHDLLAIYQKLLKLYESTEKQKWYEVCQ
KLVDLYHQEEKPLEAAKTWRRLIQMKQDDGVGKEELHQLWKKIIEILSDNIENQDNGSQE
MLRTTFENALSSLDKIPSDEHQKLSIEYIKFLAKLPREEDKLKVTCETLITQYPNSFTPL
EVLSMYFIHTDCISEEAVECFTRLNKMEPNNGPSLIGLGIKAMQEKKYEEAAKSITEGLK
EAHSAIAAWFYLGQAQLRMHRYKEAISACRHGLKLLASNIHDGNIHDRTRLLRLQAEAMV
RSGDPANAQEAFGVLEQILDTSEPALLAIKGQAYLNKGLIKKALEIVEDLVVSHPELAET
WVLQGLINNTLKHYLQAEQSFQKAVKIKGDCGEYYYYLGQTYWSMGEETRKDKTKTVTHL
LKAAKLDSYNGKIFCYLGHYYRDIALDKNRARGCYRKAFELDSSDEDAGAAAVDLSLEVG
DMDTALVILRAVTDKASAGAAKWAWLRRGLYYMRINQCTQAIADLQAALRADPKDPNCWE
CLGEAYLSRGGYTAALKAFTKASELNPNSVYNIYKIAAIKQILGKYAEAIAEYKQIIYNS
QNYVPALKGLGECCLMMARSALNDYLDGRAVDIIEEALQYSARAVLWRPDVSCLWKLIGD
ACTALHVLSPAKVNIQVSVVLTGXRKSDVQTLNKGGILILGGRCYGRALHLMSTSANLWC
DLGINYYRQAQHLSASGKENEVEEILEKSLQCLKKCVMLDSRNHLYWNALGVVASCKDVA
NYALAQHAFIKSVQVEQNNVVGWTNLGVTYLKNESIELAHEAFKVAQSLEPSYVMCWIGQ
ALIAETVGSYETMDLFRHTTELGIHTEGAKGYAHWVCATLQDKTNRNSELYRYNIVQMNA
ISAAQVVMSKFTERIQTDPAAFTMLGYLNEYLNLKKQAQEAYHRAAVLLQNAEDKEALNY
AWRNLGRAFCATGQYQEAIQAYMSTPLVEFDDITGLALSYFKKELLQESVKAYEKALTVA
SSEKEKAYILIALAMIEFKQNRVDSAKTLLFKCSMLKEPSIESLQALCALGLSKKDVTLT
TAALKELLKHQNKTDSAYETCLLASGIYSLQGNNLAVQRQAAKAVHSNPSDPALWTLLSR
LVPQYAPHNANGGALVGNTAQILNFHHPKKALLFSAVNQIAAGKHVAEDENNNALKTAQK
VAHLYPDDPAVWTSLMAACHTENTVSHIKERKPKQTALEELFLTVVMTKVEADKTLPAPY
LQSLESWSLQQAVTGLNELGKRAEAEAICAKVLKKQPDQPMMFLLLRQVQCEQLLVSHER
LPETILEELKKAVMSNFTSITAWHWLAEVYKSHGLVGAAEMCYRQGLQVSSKQGQLNGKL
ASLLQLALLALKLSPVKLQKNRWPSLVKEATGEAQKISFCPLANLFQALLQFIVKLGARE
TRRLLERVVYQPGYPESIASVGRWYLLRHLWVKNDDELITVLLQDAKLKGDCRIEELYKK
LQMESS
NT seq
4701 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtaaagaagtgaagatcgtcttaaaaagtgcaagagaagctatcagaaataaa
gaatataaagaagccctgaagcattgcaaggccgtgttgaaacaagacaagaataactac
aatgcatgggtttttattggggtcgctgcagcagaactggagcagcttgatcaggcaaag
actgcttataaaaaggctgcagaattggaaccagaccagttactagcatggcagggattg
gtaaacctatacgagaagaacaatctatctgattgcaagcatgatctattagcaatttac
caaaaactcctgaaactgtatgaaagcactgaaaaacagaaatggtatgaagtctgccaa
aagttagttgatttatatcatcaagaagagaagcctctagaggctgctaaaacatggagg
cgcttaatacagatgaaacaagatgatggagttggtaaggaagaactgcatcaactgtgg
aagaagataattgagatactttcagacaatatagagaatcaggataatgggagccaagaa
atgttaagaacaacatttgaaaatgctctttcttccctggacaagataccaagtgatgaa
catcaaaagctttccattgaatacattaaatttttagcgaaactgccacgggaagaagac
aagctgaaagtaacctgtgagacgttgattactcagtatcccaattcatttactccactc
gaagtgctcagcatgtacttcatccatacagactgcattagtgaagaagcggtggaatgt
tttacaagacttaataagatggaaccaaataatgggcctagccttattggacttggaata
aaagcaatgcaagaaaaaaaatatgaagaagcagcaaagagcattactgaagggttaaag
gaggcacattcagctattgcagcttggttttacttaggacaagcccaactacgtatgcac
agatataaagaggcaatcagtgcttgcaggcatggtttgaagttgttggcaagcaatatc
catgatggtaatattcatgacagaaccagattgcttcgtttgcaagcagaagccatggtc
cgttctggtgatccagccaatgctcaagaagcttttggcgtcttggaacagattttggac
accagtgaaccagccttgcttgctattaagggccaagcttatttgaacaagggactgatt
aaaaaagcattagagattgtagaagatcttgttgtttctcatcctgaactagctgagaca
tgggtactccaaggccttataaataatactctaaaacattaccttcaggcagagcaaagt
tttcagaaagctgttaaaataaaaggagactgtggagaatattactattaccttggacaa
acatactggtctatgggagaagagactagaaaagacaagacaaaaactgtcacgcatctg
ctaaaggctgcaaagttagattcgtacaatggaaaaatattctgctacttgggccactac
tatcgagatattgcactggataaaaaccgagcccgaggttgctacaggaaagcctttgaa
ctggacagcagtgatgaagatgctggagcagcagctgttgatctaagtcttgaagttgga
gatatggataccgctcttgtaattctgagagcagtgactgataaggcaagtgctggggca
gccaaatgggcttggcttagacgaggactttactacatgaggatcaaccagtgcacccaa
gctattgcagatttacaagcggctttgagggcggacccgaaggatcccaattgttgggag
tgtttaggggaggcatacctcagcagaggaggatacactgctgctttaaaagccttcaca
aaagccagtgaattgaaccccaattcagtgtacaatatttacaagatagcagcaatcaag
cagattcttggcaaatatgcagaggccatcgcagagtataaacagatcatttacaattca
caaaactatgtccctgctctcaaaggtctaggtgaatgctgtctaatgatggctcgaagt
gctcttaatgattatttagatgggagagctgtggacataatagaagaagcacttcagtac
tctgctagggctgtactgtggcgacctgatgtatcctgtctttggaagttaattggagat
gcatgtactgcattgcatgttctgtcaccagctaaagtaaacattcaagtttctgttgtt
cttactggttagcgaaagagcgatgtgcagactttaaacaaaggtggtatccttattctt
ggaggaaggtgctatggccgagccctccatttgatgtccacctctgccaatctatggtgt
gatcttgggatcaattactatagacaggcacaacatctgtcagcttcagggaaagagaat
gaagtagaagagatactagaaaaatctttgcagtgccttaaaaaatgtgtgatgttggac
agcagaaatcatctgtactggaatgcacttggagttgttgccagttgcaaagatgttgca
aactatgcccttgcgcaacatgcgttcatcaaatcagttcaggttgaacaaaataatgtc
gtgggctggaccaatctgggagttacttatctgaagaatgaaagtattgagttggcccat
gaagccttcaaggtagcccaatctttggagccctcatatgtaatgtgttggattgggcag
gcacttattgcagaaactgttggtagttatgagactatggatttgtttagacataccact
gagcttggtattcatacagaaggagctaagggatatgcacactgggtatgtgcaactctg
caagataaaacaaaccggaattcagaattgtatcgatacaacattgtacagatgaatgca
atatctgcagcacaggttgttatgagcaagtttacagagaggatacagactgatccagcg
gcgtttacaatgttggggtatttaaatgagtatcttaacctgaaaaagcaagcacaggag
gcatatcacagggcagcagtgctactacagaatgctgaagacaaagaagcattaaattat
gcttggagaaatttgggtcgagccttttgtgcaacaggtcaatatcaggaagctatccag
gcttacatgtctactccacttgtggagtttgatgacatcactggccttgctctgtcatac
ttcaagaaagagctacttcaggagagtgttaaagcttatgaaaaggctttaactgttgct
tcctcggagaaagagaaggcttacatactgattgcactcgcaatgatcgaatttaaacag
aacagagtggacagtgccaagactctgctttttaagtgttccatgctgaaggaacccagt
atagaaagtctgcaggctctgtgtgcactgggcctttccaagaaagatgttacactcacc
acagcagcacttaaggaactgttgaagcaccagaacaaaaccgattcagcatatgaaacc
tgccttcttgcttcagggatatattctttgcaaggtaacaacttggctgtacaaaggcag
gcagccaaagcagttcatagcaatcctagtgatcctgctctttggacattgttatccaga
cttgttccacaatacgctcctcacaatgcaaacggtggggcattggttggcaacactgca
cagattctcaattttcatcatccaaagaaggctcttctgttcagtgctgtaaaccagatt
gcagcaggtaaacacgtagcagaggatgaaaacaataatgcattaaagactgcccaaaag
gtggcccatctgtatccagatgatccagctgtgtggaccagtttaatggcagcctgtcac
acagaaaatacggtatcgcatataaaagagagaaaacccaaacaaactgccttagaagaa
ttgtttctgacagttgtcatgacaaaagtagaagcagacaagactctcccagctccctat
cttcaatccttggagagctggtctcttcagcaggctgtaacgggactgaatgaattgggc
aaacgtgctgaagctgaagccatctgtgctaaagtcctgaagaagcaaccagatcagcct
atgatgttcttactgctgagacaggttcaatgcgaacaactcttggtttcacatgaacgg
ctcccagaaaccattctggaagagctaaaaaaggcagtcatgtccaacttcacatcaata
acagcttggcattggctagcagaagtctataaatctcacggattagtgggagctgcagag
atgtgctatagacaaggactacaagtttcttcaaagcaaggacagttgaacggcaagttg
gcgagtctactccaattagcattgctagcactcaaactcagtccagttaaacttcagaag
aatcgatggccatcactagtgaaggaggcaactggtgaagctcaaaagatctccttctgt
cctcttgctaaccttttccaagcacttctacaatttatagttaaattaggtgcaagggag
actcgcaggttactggagagagtggtgtatcagcccggatacccagaaagcattgcatct
gtcggacgctggtacctccttcgccatttgtgggtcaaaaatgatgatgagcttatcaca
gttttacttcaagatgccaaattgaagggagattgccgaatagaagagctgtataagaag
cttcagatggaatcatcctag
DBGET
integrated database retrieval system
