Callorhinchus milii (elephant shark): 103178581
Help
Entry
103178581 CDS
T03088
Symbol
cul4b
Name
(RefSeq) LOW QUALITY PROTEIN: cullin-4B
KO
K10609
cullin 4
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03420
Nucleotide excision repair
cmk04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103178581 (cul4b)
09124 Replication and repair
03420 Nucleotide excision repair
103178581 (cul4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmk04121
]
103178581 (cul4b)
03400 DNA repair and recombination proteins [BR:
cmk03400
]
103178581 (cul4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmk04147
]
103178581 (cul4b)
Ubiquitin system [BR:
cmk04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Cullin
103178581 (cul4b)
DNA repair and recombination proteins [BR:
cmk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
103178581 (cul4b)
TCR (transcription coupled repair) factors
Cul4-CSA complex
103178581 (cul4b)
Exosome [BR:
cmk04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103178581 (cul4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
Motif
Other DBs
NCBI-GeneID:
103178581
NCBI-ProteinID:
XP_042201600
LinkDB
All DBs
Position
Unknown
AA seq
847 aa
AA seq
DB search
MFRTGLPSPNSPQEVRQQADVGPRKRKLAEAEAGEFEPQPEAQLQHLPFARPAASSAAAA
AHHHHHLHHHHVPHKKVKFDDDSLDFIGLDAMAEEAAQRKSGCSVLTGVHANGLTKSSTF
ANSKPGTAKKLVIKNFADKPKLPDNYTNETWQKLKEAVEAIQNSTSIKYNLEELYQAVEN
LCSYKVSANLYKQLRQVCEDHIKAQIHQFREDSLDSVLFLKKIDKCWQDHCRQMIMIRSI
FLFLDRTYVLQNSMLPSIWDMGLELFRCHVISDRKVQNKTIDGILLLIERERNGEAIDRS
LLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQRLMQEREVPEYLHHVNKRLEEEAD
RVITYLDQSTQKPLIATVEKQLLGEHLPAILQKGLNSLLDENRIQDLCLLYQLFSRVRGG
VQVLLQHWIEYIKTFGSTIVINPEKDKTMVQELLDFKDKVDHVVDVCFLKNEKFVNAMKE
AFETFINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAF
YKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFRDMELSKDIMIHFKQYT
QNQNIPGNLELTVNILTMGYWPTYVPMEVHLPLEMVKLQEVFKDFYLGKHSGRKLQWQST
LGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKAATGIEDGELRRTLQSLA
CGKARVLAKTPKSKDVEDCDKFTCNDDFKHKLFRIKINQIQMKETVEEQASTTERVFQDR
QYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIESLIDRDYMERDKENT
NQYNYVA
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgaacgggcctcccgtctccaaattcgccgcaggaggtgcgacagcaggccgat
gtcggcccgaggaagcgaaagttagccgaggcagaggcaggcgagttcgagccccagccc
gaagcccagctccagcaccttcccttcgccaggcccgccgcctcgtccgccgccgccgcc
gcccaccaccaccaccacctccaccaccaccacgtcccccacaagaaagtcaagttcgac
gacgactcgctggactttatcggactcgatgcgatggccgaggaggcggcccagaggaaa
agcggctgctccgtcctgacgggcgtgcacgccaacgggctgaccaaatcctccacgttc
gccaacagtaaaccggggacggccaaaaaactagtcataaaaaattttgcagataaacct
aaattgcctgataattacaccaacgagacttggcagaaactgaaagaagcggtggaagca
attcagaacagtacttcaatcaaatataatttggaggagctttatcaggctgttgagaat
ctctgctcctacaaagtatcagcaaatttatacaagcagttgaggcaggtctgtgaggat
cacatcaaagctcaaattcaccaattcagagaggattccttagatagtgtcctgtttcta
aagaagatagataaatgctggcaggatcactgcagacaaatgatcatgattaggagtatc
ttcttgtttctggatagaacttatgttctgcagaattcaatgcttccatccatttgggat
atgggtttggaattattcagatgccacgtaataagtgatcggaaggttcaaaataagact
attgatggtattcttctgttaattgagagggagcgaaatggtgaagctattgatcggagt
ttacttcgaagtctattaagtatgctctcagatttgcagatatatcaagattcatttgaa
caaaggtttttggaggagaccaatcgtctgtatgctgcagaaggtcaacgactaatgcag
gaacgagaggttccagagtatttgcaccatgttaataaacgtttagaggaagaagcagac
cgtgttatcacttacttagatcaaagcacgcagaaacctctaatagctactgtggaaaaa
caactcttaggtgaacatttaccagccattctccaaaaaggtttaaatagccttttggat
gaaaaccggatacaggacctttgtcttctctaccaactttttagtagggttcgaggtggg
gtacaagttcttttgcaacactggattgaatatataaagacctttggaagtacaatagta
attaatccagaaaaagataaaacaatggttcaagaactgttggatttcaaggataaagtg
gatcatgtagtcgatgtctgcttcctgaagaatgaaaaatttgtcaatgcaatgaaggaa
gcttttgaaaccttcataaacaaacgaccgaacaaaccagctgaattgatagccaaatat
gtggactccaaacttcgagccggaaacaaagaggctaccgatgaagaacttgaaaagatg
ctggacaaaattatgataatatttagattcatttatggaaaagacgtgtttgaggccttt
tacaagaaagacttggcaaagagactgctggtaggaaagagtgcgtcggtggatgcagaa
aaatctatgctttccaaactgaaacatgaatgtggagctgcattcaccagcaaactggaa
ggaatgttcagagacatggagctttcaaaagatattatgatccattttaaacagtacaca
cagaatcaaaacatcccaggcaaccttgagctgactgtgaacatacttacaatgggctac
tggcctacttatgtacctatggaggtccatttacccctggagatggtgaaacttcaggaa
gtgttcaaggatttttatctgggtaagcacagtggtagaaagctgcagtggcagtcaacg
ttggggcattgtgtgctgaaagcagaatttaaagagggtaagaaagagctccaggtgtca
cttttccaaactctggtattactcatgtttaacgaaggggaggagttcagcttggaagaa
ataaaagctgcaactggaatagaggacggagagttgagaagaactttgcaatctttggct
tgtggcaaagctcgtgtattagccaagactccaaaaagcaaagatgtcgaagactgtgat
aagttcacctgcaatgatgatttcaagcacaagttgttcaggatcaagattaatcagatc
cagatgaaagaaacggtggaagaacaggccagtaccactgagagagtattccaagacagg
cagtatcagattgatgctgccattgttcgaatcatgaaaatgagaaaaactctgagccac
aaccttcttgtatcagaagtgtacaatcagctgaagtttccagtcaagcccgctgatctg
aagaaaagaatagaatctttaattgacagggactacatggagagagacaaagaaaatacc
aaccagtacaactatgtggcatag
Callorhinchus milii (elephant shark): 103185525
Help
Entry
103185525 CDS
T03088
Name
(RefSeq) cullin-4A isoform X1
KO
K10609
cullin 4
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk03420
Nucleotide excision repair
cmk04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103185525
09124 Replication and repair
03420 Nucleotide excision repair
103185525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmk04121
]
103185525
03400 DNA repair and recombination proteins [BR:
cmk03400
]
103185525
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmk04147
]
103185525
Ubiquitin system [BR:
cmk04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Cullin
103185525
DNA repair and recombination proteins [BR:
cmk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
103185525
TCR (transcription coupled repair) factors
Cul4-CSA complex
103185525
Exosome [BR:
cmk04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103185525
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
ADH_zinc_N
Motif
Other DBs
NCBI-GeneID:
103185525
NCBI-ProteinID:
XP_007902268
LinkDB
All DBs
Position
Unknown
AA seq
845 aa
AA seq
DB search
MLRSGVTSESSPQEERQTAVVVAAHCSHPKKRVRSAESGEPESLSGSYHKAASSSSLSLS
PSPQQTPQHNHNHLKKRQRAEEPLECVVSDMAEEGQHKKANFSALVGHTNGLTKSATLTG
KPGTSKKLVIKNFKDKPKLPDNYTQDTWQKLHEAVGAIQRSTSIKYNLEELYQAVENLCS
YKVSPTLYKQLRQACEDHVKAQIHQFREDSLDSVLFLKKINKCWLDHCRQMIMIRSIFLF
LDRTYVLQSSMLPSIWDMGLELFRTHIINDRIVQSKTIDGILLLIERERTGEAVDRSLIR
SLLSMLCDLQVYQESFEHRFLEETNHLYAAEGQTLMQEREQVPEYLHHVNKRLEEESDRV
ITYLDQSTQKRLVACVEKQLLGEHLTAILQKGLDNLLDENRVADLTLLYQLFSRVKGGLQ
VLLQHWSEYIKTFGTTIVVNPEKDKTMVQELLDFKDKVDHVIDVCFIKNEKFINTMKEAF
ETFINKRPNKPAELIAKYVDSKLRAGNKEATDEELERMLDKIMIIFRFIHGKDVFEAFYK
KDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVHFKQYVQN
HNDPSKIDLTVNILTMGYWPTYIPMEVHLPAEMVKLQEIFKIFYLGKHSGRKLQWQPTLG
HSVLKAEFKEGKKELQVSLFQTLVLLMFNEGDEFSVEEIKTATGIEDGELKRTLQSLACG
KARVLNKAPKGKDVEDGDKIIFNDDFKHKLFRIKINQIQMKETVEEQTSTTERVFQDRQY
QIDAAIVRIMKMRKTLSHNLLVSELYNQLKFPVKPGDLKKRIESLIDRDYMERDKDNANQ
YHYVA
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgatcaggtgtcacctctgaaagttcgcctcaggaagagcgacaaactgctgtt
gttgtggccgcgcactgcagccatcccaagaagagagtccgttcggcggagtccggagag
ccggaaagtctcagcggttcttaccataaagccgcctcctcctcctccctctccctctcc
ccctccccccagcaaacccctcagcacaaccacaaccacctcaagaagaggcagcgggcg
gaggagccgctggagtgtgtggtgtcggacatggccgaggagggccaacacaagaaggcc
aacttctcagctctggtcggccacaccaatggcctcaccaagtccgccactctcaccggg
aaaccggggacgtctaagaaattagtcatcaaaaactttaaagataaacctaaattgcct
gacaactacactcaagatacttggcagaaactccatgaagcagttggagccattcaaaga
agcacatctattaaatacaatctggaagagctttatcaggctgttgaaaatctgtgttcc
tataaagtgtcaccaacactgtacaaacaactgagacaagcctgtgaagatcacgtgaag
gcacagattcatcaattcagagaggattccctggatagtgttctctttctgaagaagatt
aacaaatgttggctggatcactgtaggcaaatgattatgattaggagcattttcttattt
ctggaccgaacgtacgttctgcagagttcaatgcttccatctatctgggatatgggttta
gagcttttccgaacccacatcatcaatgaccgaattgtacagagcaaaaccattgatgga
atacttttgctgattgaaagagagcgaactggggaggctgtggaccgaagcttgataaga
agtctgttaagcatgttgtgtgatttgcaggtttatcaggaatcatttgaacataggttt
ttggaggagactaatcacttatatgcagcagaaggccaaacactaatgcaagaaagagag
caggtaccagaatatcttcaccacgtaaacaaacgtttggaagaggaatcagaccgagta
attacttacttggatcaaagtacacagaaaaggttggttgcctgtgtagagaaacagctt
cttggagaacatctgacagctattcttcagaaaggtcttgataatctacttgatgagaat
cgagtggcagacctcactcttctttaccagctgtttagcagggttaaaggtggattgcag
gtacttctgcagcactggagtgaatatattaagacctttggcacaacaatagtggttaat
cctgaaaaggataaaacaatggttcaagagctattggactttaaagacaaagtggatcat
gtaattgatgtatgtttcataaaaaatgagaagttcatcaatacaatgaaggaagctttt
gagacttttattaacaagagaccaaacaagcctgctgaattgatagccaagtatgtagat
tcaaagttgcgagctggtaacaaagaagcaaccgatgaagaactggagagaatgctggat
aaaatcatgataatatttcgatttattcacggtaaagatgtatttgaggccttttataag
aaagatttggctaagcggctgctggttggaaaaagtgcttcagtagatgctgagaaatca
atgttatccaaactgaaacacgaatgtggtgcagccttcaccagtaaactagagggaatg
ttcaaagatatggaactatctaaagacattatggttcattttaaacagtatgtgcaaaat
cataatgaccctagcaagatagacctcacagtcaacattctgacaatgggttattggccg
acgtacatacccatggaggtacatttgccggctgagatggtaaaactccaggagattttt
aagatattttatctgggaaaacacagtggcagaaaactacagtggcaaccaactttagga
cattctgttttgaaagccgaattcaaagagggtaaaaaggaacttcaggtttcattgttc
caaacattggtgctgctcatgtttaatgaaggggatgaattcagcgtggaagaaatcaaa
acagctactggtatagaggatggtgaattgaaaagaacattgcagtcattagcctgtggc
aaagctcgtgttttgaacaaagctccaaagggaaaagatgtagaagatggagacaaaatt
atcttcaatgatgactttaaacataaattgttcagaataaagattaaccaaatccagatg
aaagaaactgttgaggaacaaactagcaccacagagagagtgttccaggatagacagtac
caaatagatgctgctattgttcgaatcatgaaaatgagaaaaacgctcagtcataacctc
cttgtttcagaactttacaaccagttaaaatttccagtgaagcctggagacttgaagaaa
agaatcgagtcacttattgatcgtgactatatggagagggacaaagataatgccaaccaa
taccactatgtggcataa
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integrated database retrieval system