KEGG   Callorhinchus milii (elephant shark): 103178771
Entry
103178771         CDS       T03088                                 
Symbol
ercc4
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair endonuclease XPF
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
cmk  Callorhinchus milii (elephant shark)
Pathway
cmk03420  Nucleotide excision repair
cmk03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    103178771 (ercc4)
   03460 Fanconi anemia pathway
    103178771 (ercc4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cmk03032]
    103178771 (ercc4)
   03400 DNA repair and recombination proteins [BR:cmk03400]
    103178771 (ercc4)
DNA replication proteins [BR:cmk03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    103178771 (ercc4)
DNA repair and recombination proteins [BR:cmk03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     103178771 (ercc4)
SSDB
Motif
Pfam: ERCC4
Other DBs
NCBI-GeneID: 103178771
NCBI-ProteinID: XP_007891886
LinkDB
Position
Unknown
AA seq 901 aa
MTPLLEHERQIFLDLFHEDGLVVTARGLGVDRILLHXLKLHCDPGNLVLVLNTNVAEEEY
FIEQLRSEGVSHLPRIINNEIPSSERYTVYTEGGVLFVTSRILVVDFLTNRIPANLITGI
LVYKAQKIIESCQEAFILRLYRQKNKQGFIKAFTDNAVAFSAGFCKVERVMRNLFVRKLY
LWPRFHIAVSSFLERHKPEVIELHVSLTPAMLAIQTSMMDIMNACLRELKRYNPSLEIED
LSLENAIGKSFDKIIRHYLDPVWHQLGAKTKSLVQDLKILRTLLQYLTQYDCVTFLNLLE
SLRDSEKTFGQNSGWLFLEASDIMFVNARARVYKLPETRLKTFKNPAKVEQKEMKETEGK
RELVLEQNPKWEALSEVLKEIRSENEPGEALESPGQVLICASDDRTCAQLKEYITVGAEA
LLTRLYSKTLGTNEKAEDAWANSVKDRVLGKSKKMSKSDNGPKQKKAKTESVKNCTTRKK
PELTLTQMTGGAKHEGTKKEEGGEESGSQESSTEEAEGLPQNLPTNSCYGILTEPLLLIH
PLQGCSDSYSLTRVLHEVDPRYVILYDAELTFVRQLEIYKASRPGQPLRVYFLIYGGSSE
EQRYLTTLRKEKMAFEHLIREKAVMVVPQEREGRDDSNQDLVRSVVPPTATADTRKAGGQ
GQKKEEHCIIVDMREFRSGLPSLIHKRGIDIEPVTLEVGDYILTPDICVERKSVSDLIGS
LNNGRLYAQCVSMTRYYKRPMLLIEFDPSKSFSLNSKGTIHQEISANDTTSKLALLTLHF
PRLRILWCPSPHVTAELFEELKQGRPQPDAATAMAIAADLDTLSESGKYNPGSHDFLMKM
PGVNSKNCHALMNRVENLTELVSLTKDSLADILGNANNAKLLWEFIHSSCKDNVAQGKRK
K
NT seq 2706 nt   +upstreamnt  +downstreamnt
atgacacctttgctggagcacgagcggcagatctttctcgacttgttccacgaggacggg
ctcgtggtgacggcccggggcctgggggtggacaggatcctgctgcacntcctgaagctg
cactgcgaccccggcaacctggtgctggtgctcaacaccaatgtggccgaggaggagtac
ttcattgagcagttacgctctgaaggggtgtcacaccttcctcgtatcattaacaatgaa
atccccagtagtgagcgctacactgtgtacactgaaggtggagtcttgtttgtgaccagt
cgcattctggtagttgacttcttaacaaatcgaattcctgcaaaccttatcacaggaata
ttggtatacaaagctcagaaaatcatcgagtcctgtcaagaagcatttattctccggcta
tatcggcagaagaacaagcagggttttatcaaggctttcacggataatgcggtggctttc
agcgctggattctgtaaagtggagagggtgatgagaaatttgtttgttcgaaagctatac
ctctggccaagatttcacatagctgtcagctctttcttggagagacataaacctgaagta
atcgaactgcatgtgtctctgacacctgccatgctggctatccaaacttctatgatggac
ataatgaacgcctgcttgagagaacttaaacgctacaacccatcgttggaaatcgaggat
ctgtctcttgagaatgctattgggaagtcatttgacaagataattcggcactatttggat
ccagtctggcaccagcttggcgctaagaccaagtctctggtccaggatttgaagattctc
cgcaccctattacagtatctgactcaatatgattgtgttaccttcctcaatctgctggaa
tctcttcgagacagcgagaaaacatttggacaaaactcaggatggttgttcttggaggcc
agcgacatcatgtttgtgaatgctcgagctagagtttataagcttcctgagaccaggctt
aaaaccttcaaaaatccagccaaggttgaacaaaaagaaatgaaggagacagagggaaag
agagagctggtactggagcagaacccaaagtgggaagcattgagtgaggttctgaaagag
atcaggagcgaaaatgaaccaggtgaagccctggaaagcccaggccaagtgctgatctgt
gccagcgatgaccgaacctgtgctcagctgaaggagtacatcactgttggagccgaggca
ttgttaacgaggctgtacagtaaaaccttggggacgaatgagaaggcggaggatgcgtgg
gcaaactctgtaaaagacagggtgctcggtaagtccaagaaaatgtctaaatccgacaat
gggcccaaacagaagaaagcaaaaacagagagtgttaaaaattgcacaaccaggaagaaa
cctgaactgaccttgacacaaatgacaggaggagcaaagcatgaaggtactaagaaggag
gaaggtggagaagaaagtgggagccaggaaagcagcactgaagaagctgagggtttgcca
cagaatctaccaacaaactcttgctatgggatcctaacagagccgctccttctcatccac
ccgctgcaaggctgcagtgattcgtacagcctaacgcgtgtactgcacgaggttgatccc
cgctatgttattctgtatgatgcagagctgacatttgttcgccagcttgagatttacaaa
gccagcaggcctggccagcccctcagagtttacttcctgatttatggtggctcttcagaa
gaacagcgttacttgacaactctgagaaaagagaagatggcttttgagcatttaataagg
gagaaggctgtaatggttgtccctcaggagagggagggaagagatgactcaaaccaggac
ctcgtacgcagtgtggttccaccgactgcaactgcagacacacgcaaggcaggtggccag
ggacagaagaaagaggaacattgcattatagtggacatgcgggagttccgcagtgggctt
ccttccctgatacacaaacgcggcattgacattgagccggtcactctggaggtgggcgac
tacattctgactcctgatatttgtgtggaacgcaagagtgtgagcgacttgatcggctcc
ttgaacaacggccgcctctacgcacagtgcgtctccatgacccgatactataagcgaccc
atgcttctaatcgagtttgatcctagcaaatccttctccctgaattccaaagggacaatt
caccaggagatttccgccaacgataccacctccaagctcgctctgctgacgctccacttt
cccaggctgcgcatcctctggtgcccgtctccacacgtaacagctgaactgtttgaggag
ctgaagcaaggcaggccccagcccgatgcagccactgccatggctattgcagctgattta
gacactctctccgagtcgggcaaatacaatccaggctcacatgacttcctgatgaaaatg
cctggcgtgaacagcaaaaactgccatgctctgatgaaccgtgtggagaacctcactgag
ctggtcagcctcaccaaagacagtttagcagacatattaggcaatgctaacaatgccaag
ctactgtgggaattcattcactcttcatgtaaagataatgtagcacaaggaaaacgaaaa
aagtaa

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