Callorhinchus milii (elephant shark): 103185956
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Entry
103185956 CDS
T03088
Symbol
cngb1a
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
cmk
Callorhinchus milii (elephant shark)
Pathway
cmk04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
cmk00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
103185956 (cngb1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cmk04040
]
103185956 (cngb1a)
Ion channels [BR:
cmk04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
103185956 (cngb1a)
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Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
103185956
NCBI-ProteinID:
XP_042196353
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MGSTSSISSAIINERLQDLVKLFKERTERVKERLIDPDSSSDDETPGGSPVKKTGVPPPL
PEEQKAPEEEEDIEEHYYEMLCCQFKSTPWLRRIIKWRFPKSLDPFSNMLYVIWLSCVMF
AWNWNIWLIPVRCTFPYQTPNNVHLWLMMDYFCDLIYLLDMAVFQSRLQFVEGGDIITDQ
KAMRANYMKTEKFKMDLVSLIPVEILYIKLGVYPALRFVRCLKYLTFLEFNDRLESIMSK
AYIYRVIRTTAYLLYSLHINACLYYWASDYEGIGANDWVYDGEGNSYIRCYYWAVKTLIT
IGGLPDPKTVFELLFQLINYFIGVFIFSIMIGQMRDVVGSATAGHTYYRSCMDNTINYMV
LNKIPKSVQNRVKTWYDYTWVSQGMLDETELLVQLPDKMRLAIAVDVNYSIVSKVALFQG
CDRQMIYDMLKRLKSVVYLPGDYVCKKGEIGREMYIIKAGEVQVVGGPDGTTVFVTLRAG
SVFGEISLLSVGGGNRRTANVVAHGFANLFILDKKDLNDILLHYPDSQKLLRRKAKAPGK
GLKFLVMFCPHQHRSGSPTSSFQELWKQERSLDSKYHVLLEETGGVTLLR
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgggttctacgtcaagtataagtagcgcaattatcaacgagcgtctccaggacctggtg
aagctcttcaaagagcgaacagaacgagtcaaggaaagattaatcgaccctgattcaagt
tcagatgatgaaactccaggcggatcgccagtgaagaagacaggggtcccacccccactc
ccagaggaacaaaaggcaccagaggaggaggaagatatcgaggaacattactatgagatg
ttgtgctgccagttcaaatccacaccgtggctcagacgcatcataaagtggaggtttcca
aagagcctcgatcccttcagcaacatgctgtacgtgatatggttgtcctgcgtgatgttt
gcctggaattggaacatctggctgatccccgtgcgctgcacctttccttatcaaacaccc
aacaatgtgcatctgtggctgatgatggattacttctgcgatctgatctacctgctcgat
atggctgtgttccaatcacggctccagttcgtagaaggaggagacattataacagaccaa
aaggctatgagagcaaattatatgaaaacagaaaaattcaagatggatttggtgagcctc
attcctgtggaaatcctctacattaaattgggtgtttatcctgcattgcggtttgtgcga
tgcttgaagtacttgaccttccttgaatttaatgaccgacttgaatcaattatgagcaag
gcttatatctacagggtaataagaaccacagcgtacttactctacagcctccatataaat
gcttgtttgtactattgggcgtctgactatgaggggattggagctaacgattgggtctat
gatggtgagggaaacagctacattcggtgctattactgggctgtgaagaccctgattaca
atcggaggattaccagaccccaaaacagtgtttgaacttctctttcaacttatcaactac
ttcattggagtcttcatcttctcgatcatgattggtcagatgagagatgtggtgggttcg
gcaactgcgggacacacatattaccggtcgtgcatggacaacaccataaattatatggtc
ctgaacaaaattcccaaatcagtacaaaaccgggtgaaaacatggtatgattacacttgg
gtctcacaaggaatgctggatgagaccgaattattggtgcagcttcctgataagatgagg
ctagcgattgctgttgatgtcaactactccattgtcagtaaagtagctctctttcagggc
tgcgacagacagatgatttatgacatgttgaaacgcctcaaatcagtggtttacctgccc
ggagattacgtgtgtaagaagggagagattggaagggaaatgtacatcatcaaagctgga
gaggttcaggtcgtgggtggacctgatgggacgacggtgtttgtgacactccgcgctggc
tctgtgtttggtgagatcagtctgctgtcggtgggaggcggtaatcgacgcacagcaaat
gtggtggctcacggcttcgccaatctcttcattctcgataagaaggatttgaacgatatc
ctactgcactacccggattcccagaaactgctgcgcaggaaagccaaagccccggggaaa
gggctaaaattcctggtgatgttctgtcctcatcagcacaggagtgggagccccacctcg
tcctttcaggagctgtggaagcaggaacgctcattggacagtaagtatcatgtgctgctg
gaagaaactggtggagttacattgctgagataa
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