Cucumis melo (muskmelon): 103483121
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Entry
103483121 CDS
T03195
Name
(RefSeq) uncharacterized protein LOC103483121
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103483121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmo03019
]
103483121
Messenger RNA biogenesis [BR:
cmo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103483121
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
103483121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
ARM_Cnot1
DUF3819
CNOT1_HEAT
NOT1_connector
Motif
Other DBs
NCBI-GeneID:
103483121
NCBI-ProteinID:
XP_050941776
UniProt:
A0ABM3KVI5
LinkDB
All DBs
Position
6:complement(497461..520997)
Genome browser
AA seq
2384 aa
AA seq
DB search
MLMFSTATSSQIRFLLHSLTESNAESVLKELSEFIDCGIEGSFILLRTCLDHFTSHGTDL
ENPLLRLIISSVFKHLLDRPNFSTIFCESLKSRDINQVTLENISNLLNLSMCERIGVGLA
VSDSENLDARLCGKNFCISQIEELCANAVSVDSTQQIQDIIMFLQRSEGLSKHLDSFMQM
LSLVQLKDVTEFVLSPLLSDELREEKFLRDVNLSHESLDNDFDSILAEMEKEMSMGDIMK
ELGYGCTVNAAQCKEILSLFLPLTEITISKILGMIARNHTGLEDSRNIYATFSLALGFSG
LSDLPSLSSWDVDVLLDTVKQLAPKVDWIRVMENLDHEGFYIPNEEAFSFFMSVYRRACQ
DAFPLHTICGSVWKNMEGQISFLKHAVLAPPEIFTFAHSGRQLAYIDGLHGDKLQLEHTN
QAWMCLDLLAILCELAERGHARSVQSILEFPLKHWPELLLLGMAHTNTAYNLLQYEVSFS
VFPLMLRNPLGSELIFQLWHLNPNLVLRGFVDAQNSDPDSMLRIVDICQELKILFSVLDM
IPYSCSIRLAAIASRQECLDLEKWLSNNLSTYKDVFFEECLKFLKGIHYGGSQDFSTKTF
YPSNAFSNIYLDTASTFLKVLRSNVGITASAKLSEEMEKLQDAVLESNPKLQNGEASDVP
ATEGYTDDIEAEANSYFQQMFSGQLTIEAMVQMLARFKESSVKREQLIFECMIANLFEEY
RFFPKYPERQLKIAAVLFGSVIKHQLVTHLTLGIALRGVLDALRKPADSKMFVFGTKALE
QFVDRLIEWPQYCNHILQISHLRSTHVELVAFIEQALLRISAGHSDSDVPAGNVELNGSS
NIQPGQQVSSTIQLQQKYESATDDRLVEVKPNVPSMGQTSIQPTGDASANQKNTTNTPAA
LGPSPGFVRPSRGAASTRFGSALNIETLVAAAEKRETPIEAPGSDVQDKISFMINNISLA
NLEAKAKEFTEILKEQFYPWFAQYMVMKRASIEPNFHDLYLKFLDRVNSKALSKEIVQAT
YENCKVLLGSDLIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGL
MIAVIPFTSKILEPCQSSLAYQPPNPWTMGILGLLAEIYSMPNLKMNLKFDIEVLFKNLS
VDMKEITPTSLLKDRKREIDGNPDFSNKDVGASQTQMVAEVKSGLMSSLNQVELPLEVAT
PSNSGNHTHLLSQYAAPLHLSSGTLMEDEKLAALGLSDQLPTAQGLLQATPSPSPFSTNQ
LPAGIPNIGSLVVINQKLNSLGLHIHFQRAVPIAMDRAVKEIVSGIVQRSVSIATQTTKE
LVLKDYAMESDETRIFNAAHLMVASLAGCLAHVTCKEPLRGSISSQLRSSLQNLGVASDL
LEQAVQLVTNDNLDLGCAIIEQAATDKAIQTIDGEIAQQLSLRRKHREGVNATFFDTGMY
AQGPLGVVPEALRPKPGHLSVSQQRVYEDFVRLPLQNQNSQAAQSTGSSVTVSGTGLSNQ
FGLSSGQLNSGYTSGLVTGLEGVSRSVDDTVDPSSVPQLSAPSGHIAADGVGVRGAENDL
VVPSFPSAASAPELHAVDTSDSIKEPGSSTQPLPSPITTDRLATTMSEPSLTTRDALDKF
QVISQKLEALVSSEAREAEFQGVIAEVPEIILRCISRDEAALAVAQKVFKVLYENASNTF
HVGAHLAILIAIRDVCKLVVKELTSWVIYSEEERKYNKDITLGLIRSELLNLAEYNVHMA
KLIDGGRNKAATEFAISLLQTLVVDESSVISELHNLVDALTKVAAKPGSSEPLQHLVEII
KNPASSIAAISGVNVGKEDKARLARDKKAPVPSIANREDSSILESEDPAGFRDQVSILFA
EWYRICELPGANEAAFNHFILQLHQNGLLKGDDMTDRFFRLLTEISVAHCLSSEVINSGA
LQSPQQIQNLSFLAIDIYAKLVFSILKGSGKTALLSRILAVTVRFIQKDAEEKKGSFNPR
PYFRLFINWLPDLGSLEPIVDGANFQILTAFANAFHALHPLKIPAFSYAWLELVSHRSFM
PKMLTGNSQKGWPYIQRLLVDMFQFMEPFLRNAELGPPVHFLYKGTLRVLLVLLHDFPEF
LCDYHFTFCDVIPPSCIQMRNIILSAFPRNMRLPDPSTPNLKIDLLAEINQSPRILSEVD
GALKSKQMKADVDEYLKTRQQGSSFLADLKQKLLLPPSEAASAGTRYNVPLINSLVLYVG
MQAIQQLQARSPHAQSSANTVTLAVFLVGAALDIFQTLIVELDTEGRYLFLNAVANQLRY
PNTHTHYFSFVLLYLFAESTQEIIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPRYN
FWNRSFIRCAPDIERLFESVSRSCGGPKSADENMVQNWVPDTAH
NT seq
7155 nt
NT seq
+upstream
nt +downstream
nt
atgctgatgttttcgactgctacctcctctcagattcgcttcctcctacacagtttgact
gaatctaatgctgaatccgttctcaaagagctttctgagtttattgactgtggaattgaa
ggaagcttcatactgctcagaacttgtttggatcatttcaccagtcatgggacagatttg
gaaaacccgctgttgcgactcatcatttcttcggttttcaagcatctattggacaggcct
aattttagtacaatattttgtgagtcccttaaaagtagagatatcaaccaagttactctc
gagaacatctcaaatctgttaaacttgtcaatgtgtgaacgaattggagttggtcttgct
gtttcagattctgaaaatcttgatgcaaggctgtgtggaaagaacttctgcattagtcag
atcgaggaactttgtgctaatgctgtatctgtggattccacccagcaaattcaggatatt
atcatgttcctccaacggtcagaagggctctcgaagcatttagattccttcatgcaaatg
ctatccttggtgcagttaaaagatgttaccgagtttgttttgtcaccacttctttcagat
gaattgcgagaggagaaatttttaagggatgtaaatctgtcacatgagtccctcgataat
gattttgattccatcttagctgaaatggagaaggaaatgagcatgggagatataatgaag
gaactgggttatggatgtacagtcaatgctgcacaatgcaaggagattttgtccctcttt
ttgccgctgacggagattactatctctaagatacttggcatgatagctcgcaatcacact
ggtcttgaggacagtcgaaatatatatgcaacttttagtctagctttgggtttcagcggg
ttgtctgatttaccatccttgagctcgtgggatgtggatgttctcctagatacagtgaag
caacttgcgcctaaagttgactggataagggtaatggaaaatttggatcacgagggtttt
tacattcctaatgaggaagcattctcatttttcatgtctgtttatagacgtgcatgccag
gatgcgtttcctcttcatactatttgtgggtccgtttggaagaatatggagggtcagatt
tctttccttaaacatgcggtattggcaccacctgaaatatttacatttgctcactctgga
agacagctggcctatattgatggattgcacggggataagcttcaacttgaacatacaaat
caagcatggatgtgccttgatcttttggctatactgtgtgaacttgctgagagaggtcat
gctagatctgtgcaatcaattctggagtttcctcttaaacactggcctgagctattgcta
cttgggatggcacacaccaacactgcatataatctgcttcagtacgaagtttctttttca
gtcttcccattgatgttgagaaatcctcttggtagtgaattgatcttccagctatggcat
cttaaccctaatttggtgttacggggatttgtggatgctcaaaacagtgatccagactcc
atgcttaggatagttgacatctgccaagaattaaagatacttttttcagtactggatatg
attccttattcctgcagcatcagactggcagctattgcttcacgacaggaatgtttagac
cttgagaagtggttgagtaacaatttgagcacatacaaagatgtattttttgaggaatgt
ctcaagttcttaaaagggattcattatgggggatctcaagatttttcaaccaaaactttc
tatccttctaatgcattttcaaatatttatttggacactgcttctacctttttgaaggtt
cttagatctaatgtggggattactgcatccgctaaactatccgaggaaatggagaagttg
caagatgcagttctggagtcaaacccaaagctgcaaaatggcgaggcttcagatgtccct
gcaacagaaggatatacagatgacattgaggcggaagctaattcctacttccaacaaatg
ttttccggtcagttgaccattgaagcgatggttcaaatgcttgctcggttcaaggaatct
tcagtgaaaagggaacaattaatttttgaatgcatgattgcaaatctttttgaggagtac
agatttttccctaaatatcctgaaagacagcttaaaattgctgcagttctctttggctct
gttattaagcatcagcttgtaactcaccttacactggggattgcacttcgtggtgtcctt
gatgcacttcgcaaacctgcagattcaaaaatgtttgtgttcggtacgaaggctctagag
cagtttgtggatcgcttgattgagtggccgcagtactgcaatcatattctgcaaatatca
catttgcgaagcactcatgtagaacttgttgctttcattgagcaggctctcctgaggata
tctgctggccattctgattcggatgtccctgcaggaaatgtggagttaaatggttctagc
aacattcaacctggccagcaggtttcgtcaacaatacagttacaacaaaaatatgaaagt
gccactgatgatcgacttgttgaggtaaaaccaaatgtaccttctatggggcaaacttca
attcaaccgactggtgatgcttctgctaatcaaaagaatacaaccaatactccagcagcg
ctgggtccttcccctggttttgttcgtccttcacggggggctgcttctaccaggtttggt
tcagctttgaatattgaaacgcttgttgctgctgctgagaaaagagaaactcctattgag
gctcccggatcggatgtacaggataagatttcatttatgattaataatatttcactcgct
aatcttgaagccaaagcaaaagaatttacagaaattttgaaggagcagttttatccctgg
tttgctcagtatatggtcatgaagagggctagcatcgagccgaatttccatgatttgtac
ttgaagttcctggacagagttaactcaaaagctttaagtaaagagatcgttcaggctact
tatgagaactgcaaggttctgttaggatcagaccttataaagtcaagttcagaagaacgt
tcattacttaagaatttgggaagctggcttgggaaactaacaattggcaggaaccaagtg
ctgcgagcccgtgaaatagatccaaaatctttgataattgaggcatatgaaaaggggcta
atgattgcagtaataccatttacttccaagatccttgaaccatgtcaaagtagtttagca
taccaacctccaaacccttggaccatgggcattcttggactactggctgagatttattca
atgcctaacttgaaaatgaacctcaagtttgatattgaggttttattcaagaatctcagt
gtggatatgaaagaaataacaccaacttctcttctcaaagaccggaagagagaaattgat
ggcaatcctgatttttcgaataaggatgttggagcatctcagacacagatggtagctgaa
gtgaaatctggcttaatgtcttctttaaatcaagtggagctcccgctagaggttgcaaca
ccatcaaattctggaaatcatactcacctgttatcccagtatgctgccccacttcatctt
tcttctggcacattaatggaagatgaaaagcttgctgcgctgggcttgtctgatcagctt
cctactgcccagggacttttacaagctacaccatcgccatcaccattctcaacgaatcag
cttcctgcaggtatccctaatataggaagtcttgttgtgatcaaccagaaacttaatagt
ttgggcttgcacattcattttcagagagcagttccaattgcaatggatagagctgtgaaa
gagattgtttctggtattgtgcagcgtagtgtctctatagctacccaaacaacaaaggaa
ctggttttgaaggattatgcaatggaatcagatgagacccgaatatttaatgctgcacat
ttgatggttgctagtctggctggatgtctagcacatgtgacttgcaaggaacccttacga
ggttcaatatcgagtcaactcagaagttctcttcagaacttgggcgttgctagtgatctg
cttgagcaagctgttcagcttgttacaaatgataaccttgatcttggttgtgccataatt
gaacaggctgctacagacaaggcaatacaaaccattgatggagaaatagctcaacagctc
tctttaagaaggaagcatcgggagggtgttaatgcaaccttttttgacactggcatgtat
gcacaaggacctcttggtgttgtgcctgaggctctccgccctaaaccaggacatctgtcc
gtttcacaacaacgagtttacgaggattttgttaggcttccgttgcaaaatcaaaatagc
caagctgcacagtctactggttcttcagttacagttagtggtactggtttgagcaatcaa
tttggtttgtcatcgggacaacttaactcaggatacacgtctggacttgttactgggctt
gaaggagtatctcggtcggtggatgatactgtagaccctagctctgtgccccaactaagt
gcaccttcaggacatattgctgctgatggtgttggtgtacgaggtgcagaaaatgatttg
gttgttccttctttcccctcggctgcttcagcccctgagctacatgcagttgacacatct
gacagtataaaggaacctggatcctctacccagcccttgccctcaccaatcactactgat
cggcttgcaactactatgtctgaaccctcacttactaccagagatgcattggataaattc
caagttatttcacaaaagttggaggctctggttagtagtgaggctcgggaagctgaattc
cagggtgttattgccgaggttcctgagatcatactaagatgtataagtcgggatgaagct
gctcttgctgtggctcaaaaggtgtttaaagttttatatgagaatgcatcaaacactttc
catgtgggtgcccatcttgctattctgattgcgattcgcgatgtttgcaagctagttgtg
aaggaacttactagctgggtgatttactccgaggaagaacgaaagtacaacaaggacatc
actcttggccttattcgcagtgaattattgaatcttgcagagtataatgttcatatggcg
aaactaattgatggaggcaggaataaggctgcaacagagtttgctatatccctcctccaa
accttggttgtggatgaatcgagtgtaatttcagaacttcacaatcttgttgatgcatta
actaaggttgctgcaaaacctggatcttctgagcctttgcagcatctggttgagataatc
aagaatcctgcttctagtatagctgccatttctggggttaatgttgggaaagaggataag
gctagacttgccagagacaagaaggctcctgtaccttccatagcaaacagggaagattct
agtattcttgaatctgaagatccagctggtttccgtgatcaggtgtcaatactatttgct
gaatggtaccggatatgtgagcttcctggtgctaatgaagctgcctttaaccatttcata
ttacaattacatcagaatggacttctgaaaggggatgatatgactgatcggtttttccgt
ttactaacggagatttctgtggcacattgcttatcatctgaagtaattaactcgggtgca
ttacaatcaccccaacaaatacagaatctttccttccttgcaattgacatttatgccaag
cttgtattttcaatcttgaagggatctggtaaaacggctcttttatctaggattctggca
gtgaccgtaagatttattcagaaagatgccgaggagaagaaaggatcatttaatccaaga
ccatattttagattgtttattaactggcttcctgaccttgggtctttagaacctattgtt
gacggtgccaactttcagatattgacggcttttgctaatgcatttcatgctttacaccct
cttaagattccagcattcagctatgcttggcttgagttggttagtcatagaagttttatg
ccgaagatgcttactgggaatagtcagaagggttggccttacatccaacgtttgctggta
gacatgtttcaattcatggagccttttttgcggaacgctgaacttggaccaccggttcat
tttctttataaaggcactcttagggtgttgctagtcttacttcatgatttccccgagttt
ctatgtgactatcattttaccttctgcgatgtgattcctcctagctgcattcagatgcgg
aatatcatccttagtgcctttcctcgaaacatgagacttccagatccatccactcccaac
ttgaagattgacttgcttgcggaaatcaatcaatctccacgtattctgtctgaggtggat
ggagctcttaaatcaaaacagatgaaggctgatgtggatgagtatctcaagaccaggcaa
cagggatcctcgtttctggctgatctgaagcagaaattgctccttcctcccagtgaagct
gcttctgctgggacccgttacaatgtgcctttgataaactcccttgtactctacgttggg
atgcaggccatccaacaacttcaggcaagaagtcctcatgcgcagtcaagtgctaatact
gttacattagcagtattcttggtgggagctgctttagatattttccagactctgattgtg
gagttggatactgaagggcgttacctcttcctcaatgctgttgcaaaccaacttcgatat
ccgaatacccacactcactatttttcttttgtcctcctatacttatttgcagaatcaact
caggaaattatccaggagcagataacaagggtgttgttggaacgcctaattgttaatcga
cctcatccatggggtctgctgattactttcattgagcttattaagaacccaagatataac
ttttggaaccgctccttcataagatgtgcacctgacatcgaaagactattcgagtcggta
tctagatcctgcggtggacctaaatctgcagatgaaaatatggttcaaaattgggttccc
gacaccgcccactaa
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integrated database retrieval system
