KEGG   Cucumis melo (muskmelon): 103486777
Entry
103486777         CDS       T03195                                 
Name
(RefSeq) UBP1-associated protein 2C-like isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cmo  Cucumis melo (muskmelon)
Pathway
cmo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cmo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103486777
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmo03019]
    103486777
   03041 Spliceosome [BR:cmo03041]
    103486777
Messenger RNA biogenesis [BR:cmo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     103486777
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     103486777
Spliceosome [BR:cmo03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    103486777
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 Cut8
Other DBs
NCBI-GeneID: 103486777
NCBI-ProteinID: XP_008443071
UniProt: A0A1S3B7X8 A0A9I9CWP9
LinkDB
Position
4:complement(31185459..31190916)
AA seq 335 aa
MEDLKKRKLEETVGNGEFSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA
DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTK
AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEVLLNFFGRYG
DIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ
AQVSPAIPSMPYPVAAGYPQPGKPHGGVAPVGYAYPQALGSYPASYPSPTTAHASYASQP
QMPYPHQVIGKKDATGLHPVTPAVMGGYPYYIAKQ
NT seq 1008 nt   +upstreamnt  +downstreamnt
atggaggatttgaagaagaggaagctggaggagaccgtcggcaatggcgaattttcttct
gttgaacatttgcgatctctcctcgagccacttcccaagcctcaactcgtcgatctcctt
gcccgactagggtcccagtatccttccattgcagaagaaataaaaagtgttgccagtgca
gatcctgtcaatcgaaagctttttgttcgtggcttggcttggaataccacttcagaaaca
ttgtgtgctgcatttagcgtgcatggggaaattgaagaaggagctgttatctatgacaaa
gcaacaggaaagtcccgtggatatggtttcattacttacaagcacatggagtcaactaaa
gctgctttaaaagcgcctagcaaaataattgagggtcgcatggctgtctgcaatttggcg
tgtgagggtctaagtggatcaagtacaactccagatttagcacagagaaagctatacatt
ggtggtttatcaccagatattacaagtgaagtattgctgaatttctttggaaggtatggt
gatatagaagaaggttcggttgcctatgataaggatacaaatgaatcacgagggtttgga
tttgttacctataccaccgtagaggctgcaaagaaggcaatagatgatccagacaagacc
tttgggggaaggaacatcattgtgaagcttgcagattcacacaggaacaagatgatgcag
gcacaagtatccccagctattccttctatgccatacccagtagccgcaggatatcctcaa
cctgggaaacctcatggcggtgttgcccctgttggctatgcttatcctcaagctcttgga
tcatatcctgcttcatatcccagtcctacgacagcgcatgcttcatatgcaagccagccc
caaatgccatatccccatcaagtgattggaaagaaagatgctactggacttcatcccgtc
acacctgctgtaatgggaggctatccatattatatagcgaaacaatag

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