Cucumis melo (muskmelon): 103498814
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Entry
103498814 CDS
T03195
Name
(RefSeq) probable helicase CHR10 isoform X1
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
cmo
Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmo03036
]
103498814
Chromosome and associated proteins [BR:
cmo03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
103498814
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
DEAD
DUF5340
Motif
Other DBs
NCBI-GeneID:
103498814
NCBI-ProteinID:
XP_050947973
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All DBs
Position
11:31847912..31857950
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AA seq
874 aa
AA seq
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MNYERRLKAAAKLILLHDSGSDNSSVSSSDFGVTATLKPYQIDGVQWLIRRYHLGVNVIL
GYKMGLGKTLQAISFLSYLKVHQISPTPFLVLCPLSVTDGWVSEIVKFAPCLKVLQYVGD
KETRRNARRRMFEHATEQPVSDVLFPFDILLTTYDIALMDQDFLSQIPWQYAVIDEAQRL
KNPSSVLYNVLLERFLIPRRLLMTGTPIQNNLSELWALLHFCMPSVFGTLDQFISTFKDS
GDLTLGHGKINGHEHFKSLKYVLSVFLLRRTKAKLSESGVLLLPPLTETTVMVPLVNLQR
KVYMSLLRKELPKLLAVSAGSSNQQSLQNIVIQLRKACSHPYLFPGIEPEPYEEGEHLVQ
ASGKLVVLDQLLQKLHESRHRVLLFAQMTHTLDILQDFLELRSFSYERLDGSIRAEERFA
AIRSFSSNNAGGSSQNTCNDAFVFLISTRAGGVGLNLVSADTVIFYEQDWNPQVDKQALQ
RAHRIGQINHVLSINLVTSQTVEEVIMRRAERKLQLSQKVVGEDYIDQDAEDIVVNETSD
LRSIIFGLHVFDQGQVDNEKSGEFEVSNVSAMAEKVIALRHKKLSNKDDTRFFINPTTFS
NGCDISIYEGTTSLNFDPGLDEVSYRSWIEKFKEATPSGANQIMELEDRKTLSRDKSLKL
QAAKKKAEEKKLSKWEALGYHSLSVEDPILPNDGDLISDAGSVYFVYGDCTHPSATVNCI
SEPTIIFSCVDDSGSWGHGGMFDALAKLSESVPSAYERASEFGDLHLGDLHLIKLDDNKQ
QSDNAPQWVALAVVQSYNPRRKVPRSKISLPDLENCISKASSSAAQHSASIHMPRIGYQD
GSDRSEWYTVERLLRKYASIYNVKVYVYYYRRTS
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgaattacgagagaaggctaaaagcggcggcgaagctcatacttctccacgattctggc
tccgacaactcatcggtatcctcttcagatttcggagttacggcgactctgaaaccctac
caaatcgatggagttcaatggctaattcggcgatatcatcttggggtcaacgtcattctc
ggttacaagatggggttgggcaaaaccttgcaagccatttcttttcttagttatttgaag
gtccatcagatatcacctacaccatttttggtattatgccctctcagcgtgacagatggt
tgggtatcagaaattgtcaaatttgctccatgcttaaaagttcttcaatatgttggagat
aaagaaaccagaagaaatgcacgcaggcgtatgtttgagcatgcaactgagcaaccagta
tctgatgtgctgtttcctttcgacattttgttgacaacatatgacatagcattgatggac
caggatttcctttctcagataccttggcaatatgctgtcattgatgaagcacagagactt
aaaaacccttcaagtgttctgtacaatgtacttctagagcgttttcttatcccaaggcgg
ttattgatgactggaactcctattcagaacaatctcagcgaactttgggctttattgcat
ttttgcatgccttcagtctttggtacacttgatcaatttatttctacgttcaaggactct
ggagatcttactttaggtcatggaaaaataaatggacatgaacattttaagagtttaaag
tatgtactatcagtcttccttctaagaagaacaaaagccaagcttagtgaatctggagtt
ctgttgctaccacctcttactgagacaacggtgatggtacctttggttaaccttcaaagg
aaggtctacatgtcattattgaggaaggagctgcctaaactacttgccgtttcggctgga
tcctcaaaccagcaatctttgcagaatattgtgattcaacttcgaaaagcttgtagccat
ccttatctgtttcctggtattgagcccgaaccttatgaggaaggagagcacctggttcag
gctagtggcaagcttgtggttctcgatcaactacttcaaaaactgcatgaatctcgacac
cgtgtcctcttatttgctcaaatgactcatacgcttgatatattacaggacttcctggag
ttgcggagcttttcctatgagcgtcttgacggatcaattcgagctgaggagcgttttgct
gctatcaggagcttcagctcgaacaatgctgggggaagttctcaaaatacctgtaatgat
gcttttgtttttttgatctccacaagagccgggggagttggtttgaatctagtgtcggct
gatactgttatattctatgaacaagattggaatccacaggtggacaagcaagctttacaa
agggcacatcgaattggtcaaataaatcatgtgttgtctataaacctagttacatcccaa
actgtcgaagaagttattatgcgaagggcagaaaggaagttgcaacttagccaaaaggtt
gtaggtgaagattatattgatcaggatgcagaagatattgtagtgaatgaaactagtgac
ttgcgatctatcatatttgggttacatgtttttgatcagggccaagtagacaatgaaaaa
tcaggagagtttgaggtgtcaaatgtcagtgccatggctgaaaaagtcattgctctgcgc
cataaaaaactatcaaacaaggatgatacaagattttttattaatccaacgactttttca
aatggttgtgatatttctatctacgaaggtactacctctctcaattttgacccaggcctt
gatgaggtgtcatatcgctcttggatagagaagttcaaggaagcaactccttctggtgct
aaccaaatcatggagttggaagaccggaaaactttatctagagataagagtctaaaactt
caggcggcaaagaagaaagcagaggaaaagaagctatctaaatgggaagcccttggatac
cattcattatctgttgaagatccaatcctacctaatgacggtgatctaatttcagatgct
ggctctgtttactttgtctatggagattgcacacatccatcagcgacagtgaattgtata
tctgagcctaccatcatattcagttgtgttgatgattccggaagctgggggcatggtgga
atgtttgacgcgctagcaaaactttctgaaagcgtcccttctgcatatgaacgagcttct
gaatttggggatctacaccttggtgatcttcatctcataaaacttgatgataacaaacaa
cagagtgataatgctcctcaatgggttgctttggctgttgtacaatcttataatccaagg
cgaaaagtcccaagaagcaagatttctcttccagatttggagaactgcatatcaaaggca
tcatcctcagcagcacaacattctgcttcaatccacatgccacggattggttaccaagac
ggatcagatcgctccgagtggtacaccgtggaacgtctactccgaaaatatgcttccatc
tacaacgttaaagtctatgtgtactactaccgaaggacatcttag
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