Cucurbita moschata (crookneck pumpkin): 111437403
Help
Entry
111437403 CDS
T05248
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos00040
Pentose and glucuronate interconversions
cmos01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111437403
Enzymes [BR:
cmos01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
111437403
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
111437403
NCBI-ProteinID:
XP_022931133
UniProt:
A0A6J1EXJ0
LinkDB
All DBs
Position
Unknown
AA seq
434 aa
AA seq
DB search
MAISLRLHFSMASSLLFLLLHILFVHSSFAGDERLQRFNSSSMADWNVKNEHAVDNPEEI
ASLVDSSIRNSTERRNLGFFSCGTGNPIDDCWRCDPRWQLRRKHLANCGIGFGRNAVGGR
DGRYYVVSDPGDDDPVNPRPGTLRHAVIQDRPLWIVFKRDMVITLKQELIMNSFKTIDGR
GANVHIAYGACITIQFVTNVIIHGLHIHDCKPTGNAMVRSSPSHYGWRTMADGDGVSIFG
SSHIWIDHNSLSSCADGLIDAVMGSTAITISNNYFTHHNEVILLGHSDSYVRDKQMQVTI
AYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWVMYAIGGSADPTINSQGNRYLAPANPFAK
EVTKRVDTWNGEWKHWNWRSEGDLLLNGAYFTPSGAGAAASYARASSLGAKSSSLVGTIT
SSAGALSCRRGYRC
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggcgatttctctcagactacacttttcgatggcttcttcattgctctttcttcttctc
cacatcctcttcgttcattcaagttttgctggagatgagagattgcagagattcaattct
tcatcaatggcggactggaatgttaagaacgagcatgctgttgataatccagaggaaatt
gcatcattggtcgattcgagcattcgcaacagcacagagaggaggaatttagggttcttc
tcttgtggaacaggaaacccaattgatgattgttggcgatgcgacccacgttggcaactt
cgccgcaagcacctagcaaattgcggcattgggttcggtcgcaacgctgtcggtggccgc
gatgggagatattatgtcgtttcagatcctggcgatgacgatcctgtcaatcccagacca
ggaacccttcgccatgccgtgattcaagacaggccattgtggattgtgttcaaaagagat
atggtcatcactctaaagcaagaactcatcatgaacagcttcaaaacaatcgatggccgt
ggtgctaatgtccacattgcttatggcgcttgcattacaatccaattcgtaaccaatgtc
attattcatggtctgcatattcatgactgcaagccaacgggtaacgccatggttcgaagc
tcccctagtcattatggatggaggacaatggcggatggggatggggtttctatttttggg
tcgagtcatatttggattgaccataactctctttctagctgtgctgatgggctcatcgac
gctgtgatgggatcaactgccattaccatttctaacaattacttcacccaccacaatgag
gtgatacttttgggacacagtgactcatatgtaagagacaagcaaatgcaagtgaccatt
gcttataaccattttggtgaaggtctcatccaaagaatgccaaggtgtagacatgggtat
ttccatgtagtaaacaatgactacactcattgggtaatgtatgccatcggtggaagtgct
gatcccaccattaatagccaaggcaatagatatcttgcccccgccaacccttttgccaaa
gaggtcactaagagagttgatacgtggaatggtgaatggaagcactggaattggagatca
gagggagatcttttgctaaatggagcctatttcactccatcaggagctggtgcagcagcc
agttatgcaagagcttcaagcttaggagccaaatcctcttccttggtgggcaccattact
tcatctgcaggtgccctttcttgtcgcaggggataccgttgttaa
DBGET
integrated database retrieval system