KEGG   Cucurbita moschata (crookneck pumpkin): 111437878
Entry
111437878         CDS       T05248                                 
Name
(RefSeq) methyl-CpG-binding domain protein 4-like protein
  KO
K10801  methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    111437878
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cmos03036]
    111437878
   03400 DNA repair and recombination proteins [BR:cmos03400]
    111437878
Chromosome and associated proteins [BR:cmos03036]
 Eukaryotic type
  Heterochromatin formation proteins
   MBPs (metylated DNA binding proteins)
    111437878
DNA repair and recombination proteins [BR:cmos03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     111437878
SSDB
Motif
Pfam: HhH-GPD
Other DBs
NCBI-GeneID: 111437878
NCBI-ProteinID: XP_022931728
UniProt: A0A6J1EZJ4
LinkDB
Position
Unknown
AA seq 542 aa
MTATTIMNPNLSPPSSSSFPDFLFSQFAFQGCSSSRFRFPPSKCPSESNRQNPTPEDFTQ
KRTTLMAQNSPISTLEVLQTSESNHQKTAAGQEIPILCIEDLQDNPKRGSSTLTVEDVQE
VSPKTPTSERERVLVHEPPILTLEDIQNAKSDHQPAIEPPLARRVLRFYRQFGFDEQIVQ
KTPPSVRNSMPVQRDERVVSRHFQESKSNQQGERIVSRYFQHSEIERAAHNEDEDEDEDV
NVTDQPIKRSRVGQYRKRRRKDVASSSDNSKAYQRSIRKSSRFVKESGTDKRVRFVSRYF
QNSEKNPEVEIEVSPPLQNSKTKQQGERIVSRFFQKSEEQEVVNNQQEVIQLPSQCAKSV
KRIRKPAKERKVRDKVSARPRTTLSADELFLEAYRRKSSDDTWKPPPSGIRLLQQDHAYD
PWRVLVICMLLNRTTGQQAKEVIPKLFTLCPDPKSALEVSQEQIEDIIRPLGLQRKRSLT
IQRLSEMYLKESWSHVTQLPGVGKYGADAHAIFCTGYWTEVLPKDHMLNYYWEFLHSIKH
LL
NT seq 1629 nt   +upstreamnt  +downstreamnt
atgactgcaactacaatcatgaaccctaatctctcccctccctcctcatcttcatttccc
gatttcttgttttcccaattcgcctttcaaggttgttcctcttccagatttcgctttcct
ccttccaaatgcccctccgagtcgaatcgtcaaaaccccacgccggaggattttacccaa
aagaggaccactctcatggcgcaaaactctccgatttcgactcttgaggttctccaaacc
tctgaatcgaatcatcagaagacagccgcagggcaagagattccgattttgtgtattgag
gaccttcaggataacccgaagcgtgggagttccacattaaccgtagaggatgttcaagaa
gtttcaccgaagaccccaacttctgaaagggaaagggttttagtgcatgagcctcctata
ttaactctagaggatattcaaaatgcaaaatcggaccatcaaccggcgatagagcctcca
ttggctcgtagggttttacggttttaccggcagtttgggtttgatgaacaaatagtgcaa
aaaaccccaccttctgtccgaaattccatgccagttcaacgagatgaacgtgtagtttcg
cgtcatttccaggaatcaaaatcaaaccaacaaggagaacgaattgtatcacgctatttt
caacactcggaaatagaacgagcagcccataatgaggatgaggatgaggatgaggatgtc
aatgtcacagatcaaccaattaaaagatcaagggtcggacaatacagaaaaaggaggagg
aaagacgtagcttctagctccgataattcaaaagcatatcaacgttcaatcagaaaatcc
tcacgttttgttaaagaatcgggaacggataaacgagtgcgatttgtttcccgctatttt
caaaattcagaaaagaatcctgaagtggagattgaagtttcacctccattacaaaattca
aaaacaaaacaacaaggagagcgcatagtctcacgtttctttcaaaaatcagaagaacaa
gaagtagtgaacaatcaacaagaggttatacagcttccaagtcagtgtgcaaaatctgtt
aaaagaatccgtaaaccagccaaggaaagaaaagtgagggataaagtttctgctaggcct
agaaccactctttcggctgacgagttgtttctggaagcttatagaagaaaatcgtcagat
gatacatggaaacctcctccctctggaattcgccttctccaacaggatcatgcttacgac
ccttggagggttcttgtcatatgtatgctccttaaccggacgactgggcagcaggcaaaa
gaagtgatacctaaactcttcactttgtgtcccgatccaaagtctgctttggaggtatcg
caagagcagatagaagatattattcgacctcttggtttacaaagaaaaagatcacttaca
attcagcgtttatctgagatgtatttaaaagaaagttggagtcatgtcactcagcttcct
ggtgttgggaagtatggagctgatgcacatgcaatattttgcactggatattggaccgaa
gtattgcctaaagatcacatgcttaattattactgggagtttctccacagcataaagcac
ctgctctga

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