Cucurbita moschata (crookneck pumpkin): 111442489
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Entry
111442489 CDS
T05248
Name
(RefSeq) protein SMG9-like
KO
K18735
protein SMG9
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmos03019
]
111442489
Messenger RNA biogenesis [BR:
cmos03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
111442489
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
NB-ARC
MMR_HSR1
ABC_tran
RsgA_GTPase
nSTAND3
MeaB
COPI_C
AAA_18
AAA_16
AAA_29
AAA_19
Motif
Other DBs
NCBI-GeneID:
111442489
NCBI-ProteinID:
XP_022935704
UniProt:
A0A6J1F665
LinkDB
All DBs
Position
Unknown
AA seq
409 aa
AA seq
DB search
MAGSTGGNASSNSSPTPPPPKILLAKPGLVTGGAISSKIGRGAGADDESASIRSRLPSLG
SLNLLSDSWDFHIDRFLPFLTENTEFKVVGIIGPPGVGKSTIMNEIYGFDGSSPGMLPPF
PILSEDVRAMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSSTISVISGES
LSAELAHELMSIQLGILLASICNIVLVISEGAHDLNMWRLMLTVDLLKHGLPDPSSSVFS
HTQNSNVGSEKEHKDKVSASEEYMATPIFVHAKVEDPDLVPHNILQLKRAFAQFFKTSSF
MGDKVQSEQLLSSVVPDTRNLDVDGEDRRLLFIPNRNKDDSTRGQYESFNLALWKLRDQV
LSMNGTSFSRTVSERDWLKNSVKIWELVKSSPIVMEYARTLQSSGMFRR
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggcaggttctactggtggtaacgcttcttccaattcctcgcctactcctcctcccccc
aaaattcttctggcaaagcccggcctcgtcaccggtggagcaatttcctccaagattgga
cgcggcgccggcgccgatgacgaatccgcatcaattcggtcccgtctcccttcacttgga
tccctgaatcttctctccgattcctgggacttccacattgaccgtttcctgccgtttttg
actgagaatacggagttcaaagtggtgggaataattggtccaccgggagttggtaagtcg
acgatcatgaatgagatttatggcttcgatggaagttctccaggtatgctaccaccattt
ccaattctatctgaagacgttagagccatggctaggcattgcacgttgggcattgagcca
cgaatttcttcagagaggatcattcttctggatactcagcctgtgttcagtccttctgtt
ttagctgaaattatgagaccagatggttcatccaccatctcagttattagtggcgaatct
ctatctgctgaattggctcatgaacttatgagtattcagctgggcattcttctagcgtcc
atttgcaatattgtccttgtgatatcggagggagctcacgatctaaatatgtggcgtttg
atgttaactgttgacttgcttaaacatggcttgcccgatccatcttcttctgttttctct
catacacaaaattctaatgtaggatccgagaaggaacacaaagataaagtttctgcaagt
gaagaatatatggctactccaatctttgttcatgcaaaagtggaggatccagatcttgtt
ccacacaacatcttgcaactaaagagagcatttgcacaattttttaaaacctcctcattt
atgggagacaaggtccaaagtgagcaactactttcctctgtggttccagataccagaaat
ttagatgtagatggtgaagatcgaaggttgcttttcatcccaaatcgaaacaaggatgac
tcgacaagaggccaatatgaaagttttaacttagctttgtggaagctgagggatcaggtt
ctatccatgaatggtacgtcgttttcgaggactgtttcagaacgtgattggttaaaaaac
tcggtgaagatatgggaattggtgaagagctctcccattgtaatggagtatgctagaacg
cttcaatcttcaggtatgttcaggagatag
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