Cucurbita moschata (crookneck pumpkin): 111444963
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Entry
111444963 CDS
T05248
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111444963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmos03021
]
111444963
Enzymes [BR:
cmos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
111444963
Transcription machinery [BR:
cmos03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
111444963
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
TCAD3
Motif
Other DBs
NCBI-GeneID:
111444963
NCBI-ProteinID:
XP_022938891
UniProt:
A0A6J1FEE5
LinkDB
All DBs
Position
Unknown
AA seq
1695 aa
AA seq
DB search
MAQTTEGASESVKAVAFSFMTEDEVRKHSAVKVTAPILLDAMGRPVAGGLYDPAMGSLDE
TTLCKSCGQRPFYCPGHCGHIDLVSPVYNPLLFIILHNLLQRTCFSCHHFRAGGSQVEKC
ASQLELILNGDVVKAKELDSELLTESSDSKHSNEMQNMQPKKWTSLQFSEAISAVNKFLK
PKQRECKNCGAKNPKITRPTFGWLHMTGLPGAHKRANAIRGCKPASVSSGAEGISSIEEE
NTVPQTTVINMSEVDVFDDTATKASVEDSEEVSPEIFVPKNFSAGHLLPSEVKHILKRLW
KNEAMLCSFISDIQHQGYGNKAGHSMFFLEAVLVPPIKFRPPAKGGDSIMEHPQTVLLNK
VLQSNISLGNAHANKSEHSKIVRLWMDLQQSINVLFDSKTASGPGQKDVSVGICQLLEKK
EGMFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTAWNVQKLRNAI
INGPETHPGATHYIDKLATVKLNLKPSRKSRISISRKLPSSRGVVVDQGSDDYEFEGKIV
NRHLEDGDIVLVNRQPTLHKPSIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHF
PQDEISRAEAYNIVNANNQYVKPTSGEPIRALIQDHIISAVLLTKKDTFLKFDEFSQLLY
SSGISTSRPCASSEKPGQKIFILDFESEMLPVLPAVWKPEPLWTGKQVVTALLDHITRGA
PPFCVEKDVKIPRGFFKSRHTGNNSSKVKVADGDKSKRKRTWNGIKLGKGEVPDEGNSKR
DDYSKFDKLKAERLDDDSLLIFKNELVRGVIDKAQFGDYGLVHTVQELYGSNTAGVLLSV
MSRLFTVYLQMHGFTCGVDDLLLIQCMDKEREKQLQICENIGEQVHLGFLKVKDGEKLDP
MALQLNIEKTISNNGEPALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSVNNCISLM
TTSGAKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPPWDWASRAGGFIVDRFLT
GLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVGYDHTVRDADGSIIQF
RYGEDGVDVHKNAFIIKFEALAANCEMIYQKSHHQPDSFNQYINELPSVLQEKAEVIYNS
FAKDKAPGLGQKDDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRG
EMNVTLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESME
VTVVPFSQRKREICSIYKLEIRFYPLESNPQHAHVSSEDLEEILEFVFVRELEDSIQNEM
LLLSRISGIKNFVPDSQSKGLSESDKVSSSQREENDDDDDVGNDLDVAEDLGFDMKKQKL
RTTDEMDYEDDSEEELNVKEPSAGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDV
SKSNSKGKTTKTSNKKKKAKSEFSRKDYDRAIFVSAKGNHFEVHFKFTNEPHILLTQIAQ
RTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNDTKVRKNIKPEEKEKVPALQTTGVDFKT
LWELQDELDARYIYSNDIHAMLQTYGVEAARETIIREIRNIFSSYGISVNIRHLTLIADY
MTHSGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPV
KMGTGSFDLMQKIDV
NT seq
5088 nt
NT seq
+upstream
nt +downstream
nt
atggctcagaccacagagggtgcgtccgagtcagtaaaggcggtcgccttcagcttcatg
actgaagatgaggttcgcaaacacagtgctgtgaaagttactgcacccatattgttagat
gctatgggcaggcccgtagctggcggactttatgatccagccatgggttctttagatgag
acaacactttgcaaatcttgcggacaaaggcctttctactgccccggtcattgtggtcac
attgaccttgtttctccagtgtataatcccttgctatttattattctccataatcttcta
caacgcacttgtttctcgtgccaccattttcgggctggcggatcccaggttgaaaaatgt
gcatctcaactggagcttattttaaatggtgatgttgttaaggcgaaagagttggattca
gaattgctaactgagtcttcagattcaaagcatagcaatgaaatgcagaatatgcaacca
aaaaaatggacctctcttcaattttctgaggccatatctgctgtgaataaatttttgaag
cccaaacagagagagtgcaaaaattgtggtgccaaaaatcctaagattactagaccaact
tttggttggcttcacatgactggcttgccaggagcccacaagagggccaatgctattaga
ggatgcaagcctgcgagtgtgagtagtggggctgaaggaatatcctcaattgaggaagag
aatacggttccgcaaactactgttatcaatatgtcggaagtagatgtatttgatgacact
gcaaccaaggcctctgtagaagattctgaggaagtttctcctgaaatttttgtgccgaag
aatttctccgcaggacatttgttgccgtctgaggttaagcatattttgaagcgtttgtgg
aaaaatgaagctatgctctgttcgtttattagtgatattcagcatcagggatatggaaat
aaagcaggccactccatgtttttcttagaggctgttctagtccctccaattaagttccgc
ccccctgcaaaaggaggcgattctataatggagcatcctcaaactgtgttactgaacaag
gtgctacagtccaatatatcattaggaaatgctcatgctaacaaatcagaacactcaaag
atagtcaggctatggatggatcttcaacaatctatcaatgttttgtttgatagcaaaact
gcatctggtccaggtcaaaaagatgtttctgtgggaatatgtcagttattggagaagaag
gaaggcatgtttcgtcagaagatgatgggaaagagggttaactttgcgtgccgatctgtc
atttcaccagatccctacttagcagttaatgagattggaattcccccttattttgcattg
agattgacctatccggagagagtgactgcttggaatgttcaaaagttacgaaatgctata
attaatggtcctgaaacccatccaggagccacacattacattgataagttggctacagtt
aagttgaacttgaagccaagtcggaaatcacgcatttctatctcaaggaaattaccttcc
tctcgtggagtggttgtcgatcaaggaagtgatgattatgaatttgaagggaaaattgtg
aatcgccatttggaagatggagatattgttcttgtgaatcgacagcctacacttcacaag
cctagtattatggctcatgttgttcgtgtcttaaaaggagagaagactattcgaatgcac
tatgcaaattgcagcacgtataatgctgattttgatggtgatgaaatgaacgttcatttt
cctcaagatgaaatttctcgtgctgaagcttacaacattgtgaatgcaaataaccaatat
gtgaaacccaccagtggtgaaccaatcagagcattaattcaggaccacattataagtgct
gtgcttctcacgaagaaggatactttcttaaaatttgatgagtttagccagcttctctat
agttctggcatttcaacatccagaccatgtgcttcttcggagaaacctgggcagaagatt
ttcattttagattttgaatccgagatgctacctgttcttcctgccgtatggaaaccagag
cctctttggacaggaaaacaggttgtcacagccttattggaccatatcactagaggggcc
ccaccattttgtgtagaaaaagatgtgaaaattccacgtggtttttttaagtcccgacat
acgggaaataattcttccaaagtcaaagtggccgatggtgataaatcaaagagaaaaaga
acttggaatggaattaagttgggaaaaggagaagttcctgatgaagggaactctaagaga
gatgattactcaaaatttgataaattgaaggccgagcgtttagatgacgatagtttacta
atatttaaaaatgaattggtgcgtggtgtcatagacaaggctcaatttggtgactatggc
ttagtgcatacagtgcaggagctttatggttcaaatactgctggcgtcttgctttctgta
atgagtcgtttgttcactgtttatcttcagatgcatgggttcacatgtggagtagatgat
cttttgttgatacaatgtatggacaaggagagagagaagcaactccaaatctgcgagaat
atcggtgaacaggtgcatcttggatttcttaaggttaaagatggagaaaaattagatcca
atggcactgcagttgaatattgaaaaaactatttccaataatggagagccagcattaaca
tcattggatagaaaaatgaccagccaacttaatgaaaggactggtaactctaaggtcctc
aaagatttgttgtctgagggcttgctaaaaccctctgtaaacaactgcatttctctgatg
acgacttctggggctaaaggtggtacggcaaattttcaacaaatatcttcacatttaggc
cagcagcagttagaaggcaaacgagttcctagaatggtgtcaggaaaaacattaccctgc
tttccgccttgggattgggcatcacgagctggagggttcattgttgatcgctttcttact
ggtcttcgacctcaagaatactacttccattgtatggctggccgtgaagggttggttgat
acagcagttaagacatctcggagtggatatctacaaagatgccttattaaaaatctggag
tctctaaaagttggttacgatcatactgttcgtgatgcggatggctccattattcaattt
cgttatggcgaggatggtgtagatgtccataaaaatgcctttattataaaatttgaagca
cttgcagctaactgcgaaatgatttaccaaaaaagtcatcatcagcctgacagctttaat
caatacatcaatgagctgccttcagttcttcaagagaaagcagaagtcatatataattcc
ttcgcgaaggataaggctcctggtctgggacaaaaagatgactttatcaggctgctggag
aataagtacctgtcaagtcttgcacagcctggagaaccagttggtgtactcgctgctcag
tctatcggagagccatcaacacaaatgacgttgaacacatttcatcatgctgggcgtggt
gagatgaatgtgactcttggaattccccgccttcaagagattttgatgactgcttcacaa
gatattaagacaccaattatgacatgcccgttgcgagagggctactcaatggatgatgcg
aagtgtcttgctaataagttgaagaagattacagtagctgacataatagaaagtatggaa
gtaactgttgtgccattttcgcaacggaagcgagagatatgcagtatttataagcttgaa
ataagattttacccacttgaaagtaatccacagcatgctcatgtatcttcagaagatttg
gaagaaattttggaatttgtgttcgttagggagttggaagattcaatccaaaatgaaatg
ctcttactatcacgaattagtggtataaaaaattttgtgcctgactcacaatcaaagggt
ttgagtgaaagcgataaagtaagtagctcacaacgtgaagaaaacgatgatgatgatgat
gttggcaatgacttagatgttgctgaagatcttggttttgacatgaaaaaacaaaaactt
cgaactactgatgagatggattatgaagatgattcggaagaggaactcaatgtgaaagaa
ccgtcagcaggatttgaaagtgaagttgatcaaggtgatgaggctgatataaccaatgat
gatacgatggaaattgttaaagacgctacatctgaggatcagactgagataatagatgtc
tcaaagtccaattcgaaagggaaaacaaccaaaacatcaaacaaaaagaagaaagctaaa
tcagaattctccagaaaggactatgatagagcaatttttgtgtcagcgaagggaaatcat
tttgaagtccattttaagtttaccaatgaacctcatattttactgacgcagattgctcag
agaacggcccagaaggtgtctatccaaagctctggcaaaatcatccgctgtcaacaaatt
acttgcaaggaaggtcaggtaatctaccacgggaatgatactaaggtaagaaagaatatc
aaaccagaagaaaaggaaaaagttcctgcattgcagacgactggagtcgactttaagacg
ctctgggagttacaagatgagcttgatgctagatatatatattccaatgacattcatgcc
atgctacaaacatatggagtggaagcagctagggaaacaataataagagaaattcgaaac
attttcagttcatatgggatatcagtcaatattagacatctaactctaattgctgattat
atgactcattctggtgggtaccgaccaatgaatcgattaggaggcatagccgactcaata
tctcctttcagtcgaatgacttttgagacggctgcaaggttcattgttcaagctgcatac
catggggaagtagacaccttggaaactccatctgctagaatctgtcttggtttgccagtg
aagatgggaaccggtagttttgatttgatgcagaaaatcgatgtctga
DBGET
integrated database retrieval system
