Cucurbita moschata (crookneck pumpkin): 111448440
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Entry
111448440 CDS
T05248
Name
(RefSeq) RNA polymerase sigma factor sigA-like
KO
K03086
RNA polymerase primary sigma factor
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmos03021
]
111448440
Transcription machinery [BR:
cmos03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
111448440
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
HTH_36
HTH_24
Motif
Other DBs
NCBI-GeneID:
111448440
NCBI-ProteinID:
XP_022943800
UniProt:
A0A6J1FYA0
LinkDB
All DBs
Position
Unknown
AA seq
510 aa
AA seq
DB search
MMATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANF
SPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWEDEETDLKCTVEALLLLQKSM
LEKQWNLSFDQTVLADALRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISK
QLRPTINPELLQNRLKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCE
PSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG
LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKV
RLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD
NCLENNPWHGTDIWVLKAEVNNLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSR
ERVRQIGLVALEKLKKAAKTRKMEAMLLKH
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaacaacaactgcaataactgggcttggtgcagccaagaggctgttcaattct
tcatcctattattccgatttcacagaaaaggttttgtatgccaatgaccacaggattgga
caaacccaggtttcccctacaaagagtgtggtaataacagcaagaagttcggctaacttt
tctccgagaaatcagtcgtcgaatcggcacgggcattgcatcaaagctgtgaaggaacat
gtagatacaccctcttctccaactgctgaaccaaggcttcataatagcacgatctgggaa
gatgaagaaactgatctgaaatgtactgtggaggctcttcttttgctgcaaaagtctatg
ctggagaagcaatggaatctgtctttcgatcaaaccgtgttggccgatgcgctgagagga
aaaacacagaagaaagtacctgtcacttgttctggtgtgtctgcacgacaaaggagaatg
agttctaagaggaaaatacagagcaaacatgttcttatggctcagccaagaatcagcaaa
cagttgaggcctacaatcaatcctgagctattacaaaatcgattaaaggggtatgtgaga
ggtttattaagtgaagagttgctttctcatgctgaagttgtacgcctttcgaagaaaatc
aaagtcggtctcgcattggaggagcgtaaaaccagactaaaggaaagattaggatgtgag
ccctctgaagaccaactagcaatatcactcaagatttctcgtgccaaattacggtcaagt
gtaatggaatgttcattagcaagagagaagctagcaatgagcaatgttcgtttggttatg
tctattgcgcaaagatacgacaaaatgggggctgaaatggatgacttagttcagggtggc
ttaattggacttctccgtgggatagagaagtttgattcttcaaaggggtttaaaatctca
acctatgtttattggtggatacgccagggtgtttcaaaagcattagttgagaattcaaga
atgctaagattaccgactcatatgcatgaaagattaggattgattcgcaacgctaaagtt
agactgcaagagaaaggaatcactccatcaattgataggattgcagaatccttaaacatg
tccaaaaagaaagtcaagaacgccacagaggcaataagcaaggtgttctcgctagaccga
gaggcatttccttcattaaatggtcttccaggcgaaactcatcatagttatattgcagat
aactgcctcgagaacaacccatggcatggaacagacatatgggttctgaaggctgaggtt
aacaatctcataactacgacacttggggaccgagaaagagagatcatacgcctataccac
ggtctggataacgagtgtctgacatgggaggaaataagcaaacgcatagggttgtccaga
gaaagagtaagacaaattggactagtggcgttggagaaactaaagaaggcagccaagaca
aggaagatggaagccatgttgcttaaacactaa
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