Cucurbita moschata (crookneck pumpkin): 111453637
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Entry
111453637 CDS
T05248
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos00040
Pentose and glucuronate interconversions
cmos01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111453637
Enzymes [BR:
cmos01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
111453637
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Paralog
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
111453637
NCBI-ProteinID:
XP_022950582
UniProt:
A0A6J1GF79
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All DBs
Position
Unknown
AA seq
381 aa
AA seq
DB search
MASPLLSLFFLATIIRLPSPSTAYSNSYTKLALNPVDACWRTKPNWAANRRALADCAVGF
GSDALGGKFGSIYVVIDPSDDPEYPKPGTLRFGVIQEEPLWIVFARDMVITLERELMVNS
FKTIDGRGAKVEIGNGPCITIQNVSHVIIHGITIRDCKPAKPGRVRSSVTHCGDRQQSDG
DAISVFSSSHIWIDHCSLASCTDGLIDVIHASTAVTISNNYFSQHDKVILLGHNDEFTAD
RIMRVTVAFNRFGDGLVQRMPRVRFGYAHVANNWYHKWEMYAVGGSADPKIFSQGNYFDA
PDDSSSKQVTKREVYVNGWKKWKWRSSNDVFVNGAYFIPSGWGSCTPIYTRDQAFPVAHG
SLAPLLTDSAGALSCVVGKAC
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggcttccccattattatccctcttcttcctcgccacaattatccgcctcccttcaccg
tccaccgcctactccaacagctacaccaaactagccctcaatcccgttgacgcatgctgg
aggaccaagcccaactgggcggccaaccgccgcgccctcgcagactgcgccgtcgggttt
ggcagtgacgcattgggaggcaaattcgggtcaatctacgtggtcatagacccgtcggac
gacccggaatacccgaagcccggaacgctgcgttttggggtgatccaagaggagccatta
tggattgtattcgcaagagatatggtgattactctggaaagggaactgatggtgaacagc
ttcaagaccattgacgggcgaggggctaaagtggaaattggcaatgggccatgcattacc
atccaaaacgtgagccatgtcataatccacggcatcaccatccgtgactgtaagccggcc
aagcctgggcgcgtgaggagctcagtcacccattgtggagaccgccaacagtccgatggt
gacgccatttctgtattcagttcttcccatatttggatcgaccattgctccttggctagc
tgcactgacggcctcattgacgtcatccacgcttccactgccgtcaccatctccaataat
tacttctctcaacatgataaagtgatccttctcggacacaacgatgaatttacagctgat
cgaattatgagagtgaccgtagccttcaatcgttttggcgacggacttgttcaaagaatg
ccaagggtgagatttgggtatgcccatgtggccaataattggtaccataagtgggaaatg
tacgctgtgggtggcagtgcagatccaaaaatcttcagccaaggaaactactttgatgct
cctgatgattcatcctcaaagcaggttacaaagagagaggtttatgtgaatggatggaag
aagtggaaatggaggtcttcaaatgatgtgtttgtgaatggggcttatttcatcccatct
gggtgggggtcttgtacgcctatctacactcgagatcaagcttttcctgtggctcatggc
tctttggctcctcttttgactgatagcgctggtgctttgagttgtgttgttggtaaagct
tgttga
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