Cucurbita moschata (crookneck pumpkin): 111457170
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Entry
111457170 CDS
T05248
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos04120
Ubiquitin mediated proteolysis
cmos04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111457170
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
111457170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmos04121
]
111457170
Enzymes [BR:
cmos01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111457170
Ubiquitin system [BR:
cmos04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111457170
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
111457170
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
zf-C3HC4_2
zf-C3HC4
WD40_like
zf-C3HC4_3
zf-RING_2
zf-C3HC4_4
zf-RING_UBOX
zf-RING_5
zf-rbx1
TerY_C
zf-Nse
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
111457170
NCBI-ProteinID:
XP_022955102
UniProt:
A0A6J1GSN7
LinkDB
All DBs
Position
Unknown
AA seq
706 aa
AA seq
DB search
MGGGSIGALVPTVKPDPSALDSTASPAPQPLPPPPPPPPPPSSSPPPPPPPPLVMAAQLD
AGEAKASASDVNAEDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCPCCS
NFIRSNSIFPNILLDKFLKKTAARQIKKTTSPFEYLHHALQKGCDMSIKDLDELLTLLAE
KKRKMEQEEAETNMQILLGFLYYLRKQKLEELNEIQADLHYIKEDISSVEKQRLELYRSK
ERYSGKMKMLVDDTVSTKSRSSLIDKNGNGANCGPQRSQGWMSSGNSPNARADAKTHVGS
QGPLRKDAHCSSDLHSVAQSGLGIANKRRVHTQFNELQDYYLQKRRNWRKQLVKQEDKDV
KLSSGESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFAT
AGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTKSHIASSDYEGIVTVW
DVNTRQSVMEYEEHEKRAWSVDFSRSEPTMLVSGSDDCKVKIWCTRQEASVFNIDLKANV
CSVKYNPGSSLYVAVGSADHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASAST
DSTLRLWDVKEYMPLCVYRGHTNEKNFVGLTVNSEYIACGSETNEVFIYHKAISKPMAWH
RFSSDLEDNDEDASSYFISAVCWKSDSPTILTANSQGTIKVLVLAP
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgggtgggggttctatcggcgcattggttcctactgtcaagcctgatccctctgctctc
gactccactgcttcccctgccccgcagccgctgcctcctcctcctcctcctcctcctcct
ccttcttcttctcctcctccgccgccgccgccgccgctcgtgatggctgctcaactcgat
gccggagaggcgaaggcctctgcgtctgatgtcaacgccgaggatttggataaggatatg
ctttgccctatttgcatgcagatcattaaggatgcgtttctcactacctgtggacatagc
ttttgctatatgtgcattgttactcaccttcggaataagagtgattgtccttgttgcagt
aatttcatcagaagcaacagtattttccccaatattttgcttgataagttcttaaagaaa
actgctgctcgtcagataaaaaagactacatccccatttgaatatcttcatcatgcatta
caaaagggctgtgacatgtcaataaaggatctagatgaacttttaaccctccttgcagag
aagaaaagaaaaatggagcaagaagaagcggagacaaatatgcaaattttacttggcttc
ttgtattacttgagaaagcaaaagcttgaggagcttaatgagatacaagctgatcttcac
tacattaaggaagatattagttctgtggagaaacagagattggaactatataggtccaaa
gaaaggtattcagggaaaatgaaaatgctggttgatgacactgtatcaacaaaatcacgg
tcttcattaattgacaagaatggaaatggagctaattgtggcccccaacggtcacaaggc
tggatgagttctgggaattcacccaatgctagagcagatgcgaagactcatgtaggttct
cagggaccacttagaaaagatgctcactgcagttcagatttgcattctgttgctcaatcc
ggactaggcatagcaaataaaaggcgggtccatacacagtttaatgaattgcaagactac
tatctgcaaaaacgacgaaattggaggaagcaattggttaagcaagaggataaagatgta
aagttgagcagtggagaaagttataatccagctcttgaagattttcagtctgttctaact
tcttttatgcgatacagccgattgagagtgattgccgaacttcgacacggtgatcttttt
cactctgcaaatattgtatccagtatagagtttgatcgtgatgatgagttttttgcaact
gctggtgtttcacgctgcatcaaggtttttgagtttagctcggtagtaaatgaaccagcc
gatgttcactttcccgttgttgagatgtctacacgatcaaaacttagctgtttgagctgg
aataaatacacaaaaagtcatattgctagtagtgattacgagggaatagtaactgtctgg
gatgtaaatactcgtcagagtgttatggagtatgaagaacatgaaaaacgagcttggagt
gtagatttttcacgatctgaacctaccatgcttgtatctggcagcgatgactgtaaggtc
aaaatttggtgcacaaggcaagaagctagtgtgtttaacattgacctgaaagcaaatgtt
tgctctgttaagtacaacccaggatctagcttatatgtcgcagtgggttccgctgatcat
aatattcactactacgacttgagaaatatcagccagcctctgcatgtttttaatggccat
aagaaagcagtttcttatgtgaaattcttgtcgaacaatgaactcgcatctgcttcgacc
gacagcactctgcggttatgggatgtaaaggaatatatgcctctgtgtgtgtatagagga
cacacaaatgagaagaattttgtgggtctaacagtaaacagtgaatacatagcatgcggc
agtgaaactaacgaagtcttcatttatcacaaggcgatatcgaaaccaatggcttggcat
agatttagttcagatttagaagataatgatgaagatgcaagttcatatttcataagcgct
gtttgttggaagagtgatagccccacaattttaacagcaaacagccaaggaacgatcaaa
gtgctggtacttgcaccctga
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