Chamaesiphon minutus: Cha6605_3072
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Entry
Cha6605_3072 CDS
T02414
Name
(GenBank) AMP-forming long-chain acyl-CoA synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cmp
Chamaesiphon minutus
Pathway
cmp00061
Fatty acid biosynthesis
cmp00071
Fatty acid degradation
cmp01100
Metabolic pathways
cmp01212
Fatty acid metabolism
cmp02024
Quorum sensing
cmp04146
Peroxisome
Module
cmp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cmp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Cha6605_3072
00071 Fatty acid degradation
Cha6605_3072
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Cha6605_3072
09145 Cellular community - prokaryotes
02024 Quorum sensing
Cha6605_3072
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cmp01004
]
Cha6605_3072
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmp04147
]
Cha6605_3072
Enzymes [BR:
cmp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Cha6605_3072
Lipid biosynthesis proteins [BR:
cmp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Cha6605_3072
Exosome [BR:
cmp04147
]
Exosomal proteins
Exosomal proteins of breast milk
Cha6605_3072
Exosomal proteins of breast cancer cells
Cha6605_3072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
ANC1_spectrin
Motif
Other DBs
NCBI-ProteinID:
AFY94095
UniProt:
K9UH05
LinkDB
All DBs
Position
complement(3223842..3225839)
Genome browser
AA seq
665 aa
AA seq
DB search
MTTARLANYPYTISQQEAQNISQTIDYTQINSLPEVWPIVAAKCGDTVALNAPHSKPAIS
MTYREVATQIKLFATGLQSLGIKPQTGVALFADNSPRWLIADQGIMTTGAFNAVRSSQAE
VQELLSILDNSQAQTLVVEDLKTLNKLSDRLADLPIKLIILLCDETTDVELPIKLLNFSQ
TIDLGRSAQFQPATIAKTDLATLIYTSGTSGNPKGVMLTHANLLHQINTCGTVIPATPGS
RVLSILPSWHSYERSCEYYLLSQGCTQTYTNIRYFKQDLKEYQPEYLVAVPRLSESIYEG
IQKQFREQPPNKQKLVARLLALSTKYIEARRIVQGLSLECLNPTLGQKLIARLQMAILAP
IHAIADKLIYSKIRAATGGKIRYIISGGGSLAKHLDLFFEIIGVNILVGYGLTETAPITN
VRRPWQNLRLSSGQPLPGTEIRIVDVDTRQPVAIGQKGLVMIRGPQVMQGYYRDPEATAK
AIDVDGWFNSGDLGMLTPNNDLTITGRAKDTIVLSNGENIEPTPIEDACLRSSYISQIVL
VGQDQKALGALIVPNSEALHQWAISQNLIPAPIAATNPASSNEPNILLDNPQILNNTQVI
DLFRDELNREVKNRPGYRIDDRIATIKLIAEPFSIENGLLTQTLKIRRPVVMARYHGMID
EMFAR
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgacaactgccagattagcaaactatccttacacaatttctcagcaagaagctcaaaat
atcagtcagacgatcgattatacacagataaattcgctgcccgaagtctggccgatcgtc
gctgctaaatgtggagatactgtcgcgctaaatgccccccatagcaagccagcaattagt
atgacttatcgagaagtggctactcaaattaagttatttgccactggcttgcaaagcttg
ggaatcaagcctcagactggcgtggcgttatttgccgataatagtccccgctggttgata
gccgatcaagggattatgaccacaggggcctttaatgccgttcggagttctcaagctgag
gtacaagaattactctcaattttagataacagtcaagctcaaactttagtagttgaagat
ctcaaaactctcaacaagttaagcgatcgacttgccgatttgccgattaagttaatcatt
ctactttgtgacgaaacaaccgatgtagaactgccgattaaactcctcaacttcagccag
acgatcgatctcggtcgcagtgcccaatttcagccagcgacgatcgccaaaacagattta
gccacgctcatctacacttctggcacatctggcaaccccaaaggtgtgatgctcacccat
gccaatctattgcaccaaatcaatacctgcggtacggtcatccccgccacaccaggctcg
cgagtcttgagtattttaccttcgtggcatagctacgagcgatcgtgcgaatattatctg
ctctcgcagggttgtactcagacatacaccaatattcgctatttcaagcaggatttgaaa
gaataccagcctgagtacctcgtcgcagttcctcggctctcagaatcgatttatgaaggc
attcagaagcaatttcgcgagcagcccccaaacaaacaaaaattggttgctcgtctgctg
gcactcagcaccaaatacatcgaagcccgccggatcgtccaaggattgagcttagaatgt
ctcaaccccactctgggtcaaaaattaatcgcacggctccagatggcgattttagccccc
attcacgcgatcgccgataagctgatctacagcaaaattagagcggctactggtggcaaa
atcagatatatcatcagcggcggcggctcgttagccaaacatcttgacttatttttcgag
ataattggcgtgaatattctcgtcggctatggcttaaccgaaaccgccccgattaccaac
gtccgccgtccctggcaaaatctccggctctcgtcaggacaaccgttaccaggtaccgag
atccggatcgtcgatgtcgatacccgtcagccagtcgcgatcgggcaaaaaggattagtg
atgattcgcgggccgcaagtcatgcaaggatattaccgcgatcccgaagccactgccaaa
gcgatcgacgttgacggttggtttaatagtggcgatttgggaatgcttactcccaacaac
gatctgacgattaccggacgcgccaaagacacgatcgtgctgagcaatggcgaaaatatc
gaacccaccccgatcgaagatgcttgtctccgcagctcttatatcagccaaatagtcctc
gtcggtcaagaccaaaaagcactcggcgcgctgatcgtacctaactccgaagcactacac
caatgggcgataagtcaaaatctcattcccgctccgatagcagcgacaaacccagccagc
agtaacgagccgaatatcctcctcgacaatccgcaaattctcaacaatacccaagtcata
gacctcttccgcgacgaactcaaccgcgaagtcaagaaccgccctggctaccggattgac
gatcggattgctaccatcaagttaattgccgagccatttagcatcgaaaatggcctgctt
acccaaactctgaaaattcgtcgcccagttgtgatggcgcggtatcacggtatgattgac
gagatgttcgcacgctga
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