Corynebacterium marinum: B840_04760
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Entry
B840_04760 CDS
T03633
Name
(GenBank) helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cmq
Corynebacterium marinum
Pathway
cmq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B840_04760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmq03019
]
B840_04760
03009 Ribosome biogenesis [BR:
cmq03009
]
B840_04760
Enzymes [BR:
cmq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B840_04760
Messenger RNA biogenesis [BR:
cmq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B840_04760
Ribosome biogenesis [BR:
cmq03009
]
Prokaryotic type
rRNA helicases
B840_04760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
UvrA_inter
adh_short
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AJK68571
UniProt:
A0A0B6TUZ6
LinkDB
All DBs
Position
969287..971518
Genome browser
AA seq
743 aa
AA seq
DB search
MVFPLEVAYSDQAMSITDNATGGVNEPDDMNLSEFQKNPQGDAAQAVSASTGPLTVEDLI
DPDVPAQADMDTRDADNSEAADSETENKVPDNADNETTAEADKKNASEDKTEGNGFDNLG
LPDAVLAAVKKVGYETPSAIQAQTIPVLMQGNDVVGLAQTGTGKTAAFALPILARINPKE
RSPQALVLAPTRELALQVADSFQSFADHLGGIQVLPIYGGQAYGIQLSGLRRGAQIIVGT
PGRVIDHLSKGTLDISKLRFLVLDEADEMLNMGFQEDVERILEDTPNDKQVALFSATMPN
GIRKISKQYLNEPREISVKSETRTATNITQRYINVAHRNKLDAITRILEVTEFEAMIVFV
RTKHETEEIAEKLRARGFSAAAINGDIAQNQRERTVDQLKNGKLDILVATDVAARGLDVD
RISHVLNFDIPNDTESYVHRIGRTGRAGRSGEAILFVTPRERRMLRAIERATNAPLAEME
LPSVDDVNEARKEKFADSITEALESKQLDTFRKLIKRYADEKDVPLEDIAAALAAQAQAG
ADFLMKDLPPERRRERTDRFEREDRGGDRRGGRFEERGERRERAPRPDRDGDFTTYRLAV
GKRQHVRPGAIVGALANEGGLSSKDFGRITIAVDHTLVELPKDMDPSVLDRLSDTRISGQ
RIDIERDAGAVHPPREERGGFRGGDRGGDRGGFRGGDRGGDRGGFRGGDRGGFRGNRDDR
GGDRGGFRGNRDDRGGRGGGWRD
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttcctctcgaggtcgcgtactctgatcaggcaatgagcatcaccgataacgcc
accggcggcgtaaatgagccggatgacatgaatctgtcggaatttcagaaaaacccgcag
ggtgacgcagcgcaagctgtctccgcctccaccgggccgctgactgtcgaggatctgatt
gatcccgacgtcccggctcaggcggatatggacaccagggacgcggataattctgaggcc
gccgactctgagaccgaaaacaaggtcccggacaacgctgacaacgaaactactgctgaa
gcagacaagaagaacgcctcagaggataagaccgagggcaacgggttcgacaacctgggc
ctgccggacgccgtcctcgccgcggtgaagaaggtgggttacgaaaccccctccgcgatc
caggcgcagaccatcccggtcctgatgcagggcaacgacgtcgtcggcctcgcgcagacc
ggcaccggcaagacggccgcattcgcgctgccgatcctcgcccgcatcaaccccaaggag
cgctccccccaggcgctcgtgctggcccccacccgcgagctcgcgctccaggtggccgac
tccttccagtccttcgccgatcacctcggcgggatccaggtgctgccgatctacggcggc
caggcctacggcattcagctctcgggcctgcgccgcggcgcccagatcatcgtgggcacc
ccgggtcgagtcatcgaccacctgtccaagggcaccctggacatctccaagctgcgcttc
ctcgtcctcgatgaggccgacgagatgctcaacatgggcttccaggaggatgtcgagcgc
atcctcgaggacaccccgaacgacaagcaggtcgcgctgttctccgcgacgatgcccaac
ggcatccgcaagatctccaagcagtacctcaacgagccgcgcgagatctcggtcaagtcc
gagacccgtaccgccaccaacatcacgcagcgctacatcaacgtcgcgcaccgcaacaag
ttggacgcgatcacccgcatcctcgaggtcaccgagttcgaggccatgatcgtcttcgtg
cgcaccaagcacgagaccgaggagatcgccgagaagctgcgcgcccgtgggttctccgcg
gccgccatcaacggcgacatcgcgcagaaccagcgcgagcgcaccgtcgatcagctcaag
aacggcaagctggacatcctggtcgctaccgatgtcgccgcccgcggcctggacgtcgac
cgcatcagccacgtgctgaacttcgacatcccgaacgacaccgagtcctacgtccaccgc
atcggccgcaccggccgcgcgggccgcagcggcgaggcgatcctcttcgtcaccccgcgc
gagcgccgtatgctccgggccatcgagcgcgccaccaacgcgccgctggccgagatggag
ctgccctccgtcgacgacgtcaacgaggcccgcaaggagaagttcgccgactccatcacc
gaggcgctcgaatccaagcagctggatacgttccgcaagctgattaagcgttacgccgac
gagaaggacgtcccgctggaggatatcgccgcagccctggccgcacaggcccaggccggc
gccgacttcctcatgaaggatctcccgccggagcgccgccgcgagcgcaccgaccgcttc
gagcgcgaggaccgtggcggcgaccgccgcggcggccgcttcgaggagcgcggcgagcgc
cgtgagcgtgccccgcgtcccgaccgtgacggcgacttcaccacctaccgcctcgcggtg
ggcaagcgtcagcacgtccgcccgggtgccatcgtcggcgccctggccaacgagggtggc
ctgtccagcaaggacttcggccgcatcaccatcgccgtcgaccacaccctggtcgagctg
ccgaaggacatggacccgtccgtcctggaccgcctgtccgacacccggatctccggtcag
cgcatcgacatcgagcgtgacgccggtgccgtgcacccgccgcgtgaagagcgcggtggt
ttccgtggcggcgatcgcggcggagaccgtggtggtttccgtggcggcgatcgtggcggt
gaccgtggtggtttccgtggcggcgatcgcggcggcttccgcggcaaccgcgatgatcgc
ggcggtgaccgtggtggcttccgtggcaaccgcgacgaccgtggcggtcgtggcggcggc
tggcgcgactag
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