Clavibacter sepedonicus: CMS0109
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Entry
CMS0109 CDS
T00678
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
cms
Clavibacter sepedonicus
Pathway
cms00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cms00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CMS0109
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cms01007
]
CMS0109
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cms03016
]
CMS0109
Enzymes [BR:
cms01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
CMS0109
Amino acid related enzymes [BR:
cms01007
]
Aminoacyl-tRNA synthetase
Class II (A)
CMS0109
Transfer RNA biogenesis [BR:
cms03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CMS0109
Prokaryotic type
Other AARSs
CMS0109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
TOBE_3
TOBE_2
Motif
Other DBs
NCBI-ProteinID:
CAQ00233
UniProt:
B0RHX4
LinkDB
All DBs
Position
128939..130480
Genome browser
AA seq
513 aa
AA seq
DB search
MTDSPGTPATPETAPAPAVEGSAEDVAEQKAVRLAKRARLNAQGGPGEGAYPVQVPVTTT
IPAVRAEHGHLEPGEETDHVVGIAGRVVHFRNTGKLCFATLQAGDGTRIQAMISLAEVGD
EALAAWKELVDLGDHVFVGGRVIASRKGELSIMASEWRIASKALLPLPNLHSELSDETRV
RSRYLDLIVRDQARKNVLDRAKVNASMRETFRQRGYVEVETPMLQVMHGGASARPFVTHS
NAFDTEMYLRIAPELYLKRAVVGGIDRVFEINRNFRNEGADSTHSPEFAMLEAYEAYGDY
TSIAELTQTLVQDAAMAVAGSHVVTWADGTDYDLGGEWDRISMYASLSEAAGIEITPATS
VDELQAIADREGVDVHLSTHGKLVEELWEHFVKGSLERPTFVLDFPVETSPLTRAHRSIE
GVVEKWDLYIRGFELATGYSELVDPVVQRERFVDQARQLARGDDEAMPLDEEFLRALEHG
MPPSGGMGMGVDRLLMAITGLGIRETILFPLVK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacagccccggaacgcccgcgacgcccgagaccgcccccgctcccgccgtggag
ggatccgccgaggacgtcgccgagcagaaggccgtgcgcctcgccaagcgcgcccgcctc
aacgcgcagggcggccccggcgagggcgcgtaccccgtgcaggtcccggtcaccaccacc
atcccggccgtccgcgccgagcacggccacctcgagcccggtgaggagaccgaccacgtc
gtcggcatcgcgggccgcgtcgtccacttccgcaacaccggcaagctctgcttcgccacg
ctccaggccggcgacggcacgcgcatccaggccatgatctcgctggccgaggtcggcgac
gaggccctcgccgcgtggaaggagctcgtcgacctcggcgaccacgtcttcgtcggcggc
cgcgtcatcgcgagccggaagggcgagctgtcgatcatggcgtccgagtggcgcatcgcc
tcgaaggccctgctgccgctgccgaacctccactccgagctctcggacgagacgcgcgtc
cgcagccgctacctcgacctcatcgtccgcgatcaggcccgcaagaacgtgctcgaccgc
gcgaaggtcaacgcctccatgcgcgagacgttccggcagcgcggctacgtcgaggtcgag
acgcccatgctgcaggtgatgcacggcggcgcgtccgcccgcccgttcgtcacgcactcc
aacgccttcgacaccgagatgtacctccgcatcgcgccggagctgtacctcaagcgggcc
gtggtcggcggcatcgaccgcgtcttcgagatcaaccgcaacttccgcaacgagggcgcc
gactccacccacagcccggagttcgcgatgctcgaggcgtacgaggcctacggcgactac
acctccatcgccgagctcacccagacgctcgtgcaggacgcggccatggcggtcgccggc
agccacgtcgtcacgtgggccgacggcaccgactacgacctcggcggcgagtgggaccgc
atctcgatgtacgcgtcgctgagcgaggcggcggggatcgagatcacgccggccacgagc
gtcgacgagctgcaggccatcgccgaccgcgagggcgtcgacgtccacctcagcacgcac
ggcaagctcgtcgaggagctgtgggagcacttcgtgaagggctcgctcgagcgccccacc
ttcgtcctcgacttccccgtcgagacgtcgccgcttacgcgcgcgcaccgctccatcgag
ggcgtcgtcgagaagtgggacctctacatccgcggcttcgagctggccaccggctactcc
gagctcgtggatcccgtcgtgcagcgcgagcgcttcgtcgaccaggcccgccagttggcg
cgcggcgacgacgaggccatgccgctcgacgaggagttcctccgtgccctcgagcacggc
atgccgccgtcgggcggcatgggcatgggggtcgaccggctcctcatggccatcaccggt
ctcggcatccgcgagaccatcctgttccccctagtgaagtag
DBGET
integrated database retrieval system
