Clavibacter sepedonicus: CMS1989
Help
Entry
CMS1989 CDS
T00678
Symbol
sodB
Name
(GenBank) superoxide dismutase [Fe-Zn]
KO
K04564
superoxide dismutase, Fe-Mn family [EC:
1.15.1.1
]
Organism
cms
Clavibacter sepedonicus
Pathway
cms04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
cms00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CMS1989 (sodB)
Enzymes [BR:
cms01000
]
1. Oxidoreductases
1.15 Acting on superoxide as acceptor
1.15.1 Acting on superoxide as acceptor (only sub-subclass identified to date)
1.15.1.1 superoxide dismutase
CMS1989 (sodB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sod_Fe_C
Sod_Fe_N
Motif
Other DBs
NCBI-ProteinID:
CAQ02086
UniProt:
B0REJ4
LinkDB
All DBs
Position
complement(2102250..2102876)
Genome browser
AA seq
208 aa
AA seq
DB search
MADYTLIDLPYDYSALEPSISGRIMELHHDKHHKTYVDGANTALVKLQEARDAGDLTFVN
KLQKDLAFNLAGHVNHTVFWNNLSPDGGDKPTGELAAAIDEFFGSYDKFQAHFTASALGI
QGSGWSILAWDSLGQKLIIEQLYDHQGNLAAATVPILLLDMWEHAFYLDYVNVKADYVKA
FWNIVNWADVQARFDAARTKTQGLFLLS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggctgactacactctcatcgatcttccctacgactactcggccctcgagccgagcatc
agcggccgcatcatggagctccaccacgacaagcaccacaagacctacgtggacggcgcg
aacaccgccctcgtgaagctccaggaggcgcgcgacgccggcgacctcacgttcgtcaac
aagctgcagaaggacctcgcgttcaacctcgcgggccacgtcaaccacacggtgttctgg
aacaacctctccccggacggcggcgacaagcccaccggcgagctggccgccgccatcgac
gagttcttcggctcctacgacaagttccaggcgcacttcacggcctcggccctcggcatc
cagggctccggctggagcatcctcgcctgggactccctgggccagaagctcatcatcgag
cagctgtacgaccaccagggcaacctcgctgcggcgaccgtcccgatcctgctgctcgac
atgtgggagcacgccttctacctcgactacgtcaacgtcaaggccgactacgtcaaggcg
ttctggaacatcgtgaactgggccgacgtgcaggcgcgcttcgacgccgcccgcaccaag
acgcagggtctgttcctcctctcgtag
DBGET
integrated database retrieval system