Cordyceps militaris: CCM_01280
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Entry
CCM_01280 CDS
T03108
Name
(RefSeq) antiviral protein (Ski3), putative
KO
K12600
superkiller protein 3
Organism
cmt
Cordyceps militaris
Pathway
cmt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CCM_01280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmt03019
]
CCM_01280
Messenger RNA biogenesis [BR:
cmt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
CCM_01280
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_16
TPR_22
TPR_2
TPR_CcmH_CycH
TPR_1
TPR_14
TPR_8
TPR_12
TPR_17
TPR_11
TPR_7
ARM_TT21_5th
TPR_6
T7SS_EccA1_N
ARM_TT21_C
TPR_Slam
TPR_10
ARM_TT21
BTAD
E_motif
HemY_N
DUF4919
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
18163311
NCBI-ProteinID:
XP_006666499
UniProt:
G3J451
LinkDB
All DBs
Position
Unknown
AA seq
1585 aa
AA seq
DB search
MSGSKSSLKSINDAIRSQSFEDAITKSQDLLKKDPQNYQANIFLAFALDRQGRTEDAEKV
YKAATGLRPEDGQAWQGLIKLYEKQGPRKLGDYQHAVVKLSHIFHKADDAYKAQDVVDKF
VDFARVRGDRLEYADALWIKLPESPLYSILEGRFPAPAKTYEIIAVILEDFEKKRIIALI
GERRTRLGAKLSDVTLDVKREVYAQSKLEFIYRQLINWTTDDELRRTYEEKLVRYCHDRL
LALPAGEKKAAELVKVIGLANDMVVIKHPFRLAWDIAINWQDHKEIGNWSAELLHDYCTH
FPESDLYKVITAFLTSPISPFPAASTTQQKPSADELSDDSDDDDGGGVPTSIVPLSDEDR
IMMITEGIAGEESSFGYRLVGEFFLHYGEYESTVEYMRKALPYLAKEQSLSAFDLTKTTD
AYSLCLGTSLVYYQSPRHHAEAKGLFETVLNHDATNTRAMIGVGLIYEEEEEYDQAIDFL
ERALQKDVKNIRVKSEAAWVKALKGDYQAAANGLRECLTALDVKDPDKGLLADAQYRLGY
CLWHSDTSPQARKQRKGECGYAYWLAALNSNLDHAPCYTMLGIYYSDYAKDKKRARRCFQ
KALELSSAEVISAERLSRSFADDGDWDRVELVAQRVVNSGKVKPPPGSKRKGISWPFAAL
GVAELNKHEYHKAIVSFQSALRLAPEDYHCWIGLGESYHNSGRYVAATKAIMNARKLEEQ
SDTDMAADAWFSKFMLGNIKRELGEYDEAVELYQSVIKTQPDEEGVIIALMQTMVDNALV
SVEKGQFGKAIEFATDTIKFATTAKENILATFNYWKTVGDACSVFSSVQSRTSDFPLDDI
RAILGKAPKEALEISADVDKVNLDVVSAQGKYPADEQPGVELTICIQATILCHKVAVHAV
SKDVHAQAVAMFNLGWAEYRAHSCLPPKLRKKSSNYLKAAVRCFKRAIELEAGNADFWNA
LGVVTSEVNGAVSQHSFVRSIHVDERSPVGWTNLGALALLSGDIKVANEAFTRAQSTDPD
YAHAWLGQAFVALLYGDGKEARGLFTHAMDISEASSLSVRRQYSSSMFDHILVGPTNVTI
ASLLQPVFALNQVQSLRPLDFAFGHLASLFLERTHDHSRAVEILETICASIEEDYEQTES
RLSLARFTLARIDLARAYLASKLYEKAIECGEMALGLSSDEHEGELTSEQRKKARLSAHL
TVGLAQFYEKDFGEAEKCFEAALHESDNNPDATCLLAQVLWAQGTDDAKERARASLFDVI
ETHPEHVQSVLLLGVIGLLDGDEGSVEAVTEELQGLRTKDTVTSTQQAQMGQVLRAMAIL
AEGKTADEARAQMQTDIMLHPHLPHGWSALAAAATEGGGYAAQTSLRVARRGIPPRGRLD
AVDLAGSYAGTGAVADAQTAAFLAPWETVGWSSLKTATKGHALGYHKRRIKLPTLAHLFS
LWSIRAPRRRRLQPRQSRTHPRLVPGVDPAAEKHSLVGRQQDGAAGDDGAGAEQHLLADI
GGADADAGHARRFDGVDGPAGAVLQHEPMDGVLPRGGGGGERLVIHHLAAARAARRGLER
LDLLPPAEAEIEKLQRENTMEVHFQ
NT seq
4758 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggctcgaaatcctcactgaaaagcatcaatgatgctatcagatcccaaagcttt
gaggacgccatcacaaagtcccaagacctacttaagaaggacccccagaactaccaagcg
aatatatttttggcatttgccctggatagacaaggcagaacagaagacgccgaaaaggtc
tacaaagcagctacaggtctacgtcctgaggatggccaagcctggcaaggtctgatcaag
ctctacgagaagcaaggcccacggaagctgggagactaccagcatgccgtcgtgaagctc
tctcacattttccacaaagcagacgacgcgtataaagcacaggatgtcgtagacaagttt
gtcgactttgcacgcgttagaggagaccgtctggaatatgccgatgctctgtggatcaag
ctccccgagagtcctctatactctattcttgagggccgatttcccgcgcctgccaagacg
tacgaaatcatcgccgtcattctcgaagatttcgagaaaaagcgtataattgcgctaatt
ggagaacggagaactcgacttggtgcgaaactgagcgatgtcacactcgacgtgaagcgt
gaagtctatgcacaaagcaaactggaattcatttaccggcagcttatcaattggaccaca
gatgacgagctacggcgcacgtacgaggagaagcttgttcgatattgccatgatcgcctt
ctagcccttccggcaggcgaaaaaaaggcggcggaactggttaaggtaattggtcttgcc
aacgacatggtcgtaatcaagcaccctttcaggctcgcgtgggatatcgccataaactgg
caagatcacaaggaaatcggcaactggagcgccgaattgttacacgattattgcactcat
tttccggaaagcgacttgtacaaagtcatcaccgctttcctgacgtctcctatatctcca
ttccctgctgcgtctactacacaacagaagccatctgccgacgagctttctgacgatagc
gacgacgacgacggcggcggcgttcctacatccattgttcctctcagtgacgaagatcgt
attatgatgattacagaaggcattgctggcgaggagtcgtcatttgggtaccggcttgtc
ggtgaattcttccttcattatggagaatacgagagcacagtcgaatacatgcgaaaagcg
ctcccataccttgccaaagagcaatctttgagcgcgtttgacttaacaaaaacgacagac
gcctactctctgtgcttaggcacgtcacttgtttactatcagtcaccacggcatcatgct
gaggcaaagggcctgtttgagacggttctcaatcacgacgctacaaatactcgtgcgatg
ataggtgtgggcctcatatacgaagaggaagaagaatatgaccaagccattgacttcctt
gagcgtgctttgcaaaaagatgtcaagaatattagagtcaagtccgaggctgcatgggta
aaggcgctcaagggcgattaccaagccgccgcaaatgggctgcgtgagtgtctcacggct
cttgatgtaaaagacccagacaaagggcttcttgccgacgcgcagtatcgcttgggctac
tgcctctggcattcggacacatccccccaagcgaggaagcagcgcaagggagaatgcggc
tacgcttactggctcgcagctcttaacagcaacctggaccacgcgccttgctacaccatg
ttgggcatttattatagtgattacgccaaggacaagaaacgtgctcgtcgctgcttccag
aaggctcttgagctgtcttctgcagaagtcatctccgctgagcgcctatctcgttctttc
gcggacgatggcgactgggaccgggttgagctggttgcccaacgcgtggtgaactctgga
aaggtgaaaccacctcctggatcgaagagaaagggcatcagctggccattcgctgctctt
ggtgttgctgaattaaataagcacgagtaccacaaagccatcgtctcttttcagtctgcg
ctccgactcgcaccagaagactaccactgctggatcggtctcggcgagagttaccacaat
tccggaagatatgtcgcagcgaccaaagcaatcatgaatgcccgaaagctggaggagcag
tcagatacggacatggcggccgatgcctggttctctaagtttatgcttggtaatattaag
cgtgagctgggagaatatgacgaagcggttgaattatatcaatccgtcatcaagacacag
ccagacgaggaaggtgtcatcatcgcattgatgcaaaccatggtggataatgccctggtc
agtgttgagaagggacaatttggcaaggcaatcgagtttgccactgacactatcaaattt
gctaccacggcgaaagagaacatcctggcgactttcaactattggaagactgttggcgat
gcttgttcagtattctcttccgtccaaagtcggacttctgactttcccctggacgacatc
cgcgctatccttggcaaggctcccaaagaagcgttggagattagcgccgatgtcgataaa
gtcaacctggacgtcgtctccgcccaaggaaaatatcctgcggacgagcaacctggtgtt
gagctgacgatatgcatccaagccaccattctatgccacaaggttgctgttcatgctgta
tcgaaggatgtccacgcccaagccgttgccatgttcaatctcggctgggctgaatacagg
gcgcactcgtgcttgccgccgaagctgcgcaagaagtccagcaactacctcaaggcggct
gtgaggtgcttcaaaagggctattgaactggaggccggcaatgctgacttttggaacgcg
ctgggtgttgtgactagcgaagttaatggcgccgtctcgcaacactcattcgtgcgaagc
atccacgtagacgaacgaagccctgtagggtggacaaatcttggtgcgctcgctctccta
tctggcgatatcaaggtagccaatgaagcgttcaccagagcacaatctacggatcccgac
tacgcgcatgcgtggcttggtcaagcgtttgtcgctctcctatatggcgatggcaaggaa
gctcgtggtctctttacacacgcgatggacatttctgaagcctcgtctctgtctgtgcgc
cggcaatattcgtcatccatgtttgaccatatcctcgtcggtccgacaaacgtaacgatt
gcttccctcttgcagccagtgtttgcactcaatcaagtgcagagcctgcggccgctggac
tttgcctttggccacctggctagcttgttcttggaacgcacacatgaccatagccgcgcc
gtggagattctggagacgatttgcgccagcatagaagaggactatgagcagacggaatcg
cgcctgagcctggcgcgcttcacactggcgcgaatcgacctcgcgcgcgcctaccttgcg
tccaagttgtatgaaaaggctattgaatgcggcgagatggcgctcggtctgagcagcgac
gagcacgagggcgaattgaccagcgagcagcgcaaaaaggcgcgactgtcggcgcacctg
acagtgggacttgcgcaattctacgaaaaggactttggcgaggcggaaaagtgctttgaa
gcggcgttgcacgaatccgacaacaacccggacgcgacgtgcctgctggcgcaggttttg
tgggcgcagggcacagacgacgccaaggaaagggcgcgggcgtcgctgtttgacgtgatt
gagacgcacccggagcacgtgcagagcgtgctgctgctcggcgtgattgggctgctcgac
ggggacgagggcagcgtggaggcggtcacggaggagctgcagggtctgcgcaccaaggac
acggtcacgagcacgcagcaggcgcagatgggccaggtgctgcgtgccatggccatactc
gccgagggcaagacggcagatgaggcgcgggcgcagatgcagacggatatcatgctgcac
ccgcacctcccgcacggctggtctgcactggcggcggcggcgacggagggcggtggatac
gcggcgcagacgtcgctccgggtggcacggaggggtataccgccgcgcggacggctggac
gcggtggatctcgcggggtcatatgcgggcacgggcgcggtggcggacgcgcagacggca
gcgtttcttgcgccctgggagacggtgggatggtcgtcgctcaagacagcgacgaaggga
catgcccttgggtatcataaacgccgtatcaaactaccgacccttgcccatcttttttca
ctgtggtcgatccgcgccccccgccgccgccgccttcaacctcgccagtcgcgcactcat
ccacgcctcgtgccaggcgtcgaccctgccgccgagaaacacagtcttgtcgggcgtcag
caggacggtgccgcgggcgacgacggtgccggcgctgagcagcatcttctcgccgatatt
ggtggtgccgatgccgatgccgggcatgcgcgccgtttcgacggcgtagacggtcctgcc
ggcgcagtcctgcagcacgagccgatggacggcgttcttccccgcggcggcggcggcggc
gagcgcctcgtcatccaccacctggcggccgcgcgtgccgcgcgccgcggcctcgagcgc
ctcgacctgctcccaccggctgaggctgagattgagaagctacagcgagaaaacactatg
gaagtgcacttccagtga
DBGET
integrated database retrieval system
