Cordyceps militaris: CCM_07411
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Entry
CCM_07411 CDS
T03108
Name
(RefSeq) THO complex subunit Tho1, putative
KO
K12878
THO complex subunit 1
Organism
cmt
Cordyceps militaris
Pathway
cmt03013
Nucleocytoplasmic transport
cmt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CCM_07411
09122 Translation
03013 Nucleocytoplasmic transport
CCM_07411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmt03019
]
CCM_07411
03041 Spliceosome [BR:
cmt03041
]
CCM_07411
Messenger RNA biogenesis [BR:
cmt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
CCM_07411
Spliceosome [BR:
cmt03041
]
Complex C
Other components
EJC/TREX
CCM_07411
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
CCM_07411
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Guanylate_kin
Motif
Other DBs
NCBI-GeneID:
18169422
NCBI-ProteinID:
XP_006672615
UniProt:
G3JPQ8
LinkDB
All DBs
Position
Unknown
AA seq
805 aa
AA seq
DB search
MPAVDIDKPRVASVEVFGKLLSDLLDEASVAKQSLSIEPAVTKSDLADLTSRVNAALPTK
DEEATESDAAAADLKARQFAIVEGASRDLFGALIPPSNTPKASTPIDSPDFVRMWNFLDI
LSILSDDGQCDAALVFWLVEELLDSQTIAGCRHLFDFLESRRERMTAKNFSQKKLVILRS
CNELLRRLSRAEDTAFCGRVFIFMFQCFPLGDRSSVNLRGEYHVENVTTYETTTNGSSTK
MDIDIEAPVAETNGEKKLDAKDSKAKEGGSRLSSEELYPLLWSLQESFSQPTTLFDAAKF
SHFKHSLEETLKAFESLHADDPRSSKRKRNDEGAAVAEAFNPKYLTSQDLFVLEVINDLS
FRRHVLVQALIITEFLLSLSAEAKQKLSSLPAANKAVVYSEQLSEENTKWATETKRRISE
YLRQGVDGPYFLRMVETVLARDKNWVFWKMTSCPPIERAPVAAADFVAARTSAERMATSK
RLRPTPMGAVSMEFLNRAASQTSMDELQPPARSALPALASFERPLADDDFEIAMPTSDVT
KAAAVYGKSSKSWRALRIAARTRLAAFDKIDDPNAIAVVFAEPTESDDEADGAEDAAASE
EDMPPSRAPIVLVGAALETLRAVTAALLNKHKGVFAAVVRHTTRTKADNETHGKAFHFVS
APDFGQLRDGDRLIEHGVRDGSDYGTSTKAIDAVTEAGKVPILQLDTEAAQFAKDMDFEA
RYVLVGPSTSDGAEVYDAVIAADSEDADKAAAELSAFLYGGGAENEEEAKADAESSSDDS
DEDEDEEDEAANADAEMADADGKPE
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgtcgacattgacaagcctcgcgtggcctctgttgaagtatttgggaagctg
ctatctgatttgctggacgaagcttctgttgccaagcagtcactgagcattgagcccgca
gttaccaagtctgaccttgcggacctgacgtcgcgggtgaatgcggcgctgccgacgaaa
gacgaagaagccacagagagcgatgccgctgccgcagacctaaaagctcggcagtttgcc
attgtcgaaggcgcttcaagagatctttttggtgctttgataccgccgtctaacactccc
aaggcgtcaaccccaatcgattctcccgactttgtgcgaatgtggaatttcctcgacatt
ctctccatactctccgatgatggccaatgcgatgcggcgctcgtcttctggctggtggag
gagctgctcgacagccaaacgattgcaggatgccgccacctctttgactttctcgaatcg
cgacgagagcggatgactgctaagaatttttcgcaaaagaagctggtcatcctccgcagt
tgcaacgagctactgcgccgactgtcacgggccgaggataccgcattttgcggccgtgtc
ttcatcttcatgttccagtgttttcctctcggcgataggagctcggtcaacctgcgcggc
gagtatcacgtcgaaaacgtcacgacatatgagaccacaacaaacggcagttccacgaaa
atggatattgatatcgaggctccggttgccgagacgaatggtgaaaagaagttggatgca
aaggacagcaaggctaaagagggcgggagtcgcctcagctctgaggaactatatcctttg
ctctggtcgctccaggagagcttcagtcaacccacgacactcttcgacgccgccaagttt
tctcattttaaacacagcttagaggagactttgaaagctttcgaatcgctacatgccgac
gatccaaggtcgtcgaagcggaagcgcaatgacgaaggagccgcagtagcggaagcattt
aaccccaagtacctcactagtcaggatctatttgtgctcgaggtaataaacgacttgtct
ttccgacgacacgttctcgtccaagctctcattatcacagagtttctgctgtctctatca
gcagaggcaaagcagaaactttccagcctcccggctgccaacaaggctgtcgtatacagc
gaacaactaagcgaagaaaacacaaaatgggcgacggaaaccaagcgacggatatccgag
tatctaaggcaaggcgtcgacggcccctacttcctccgtatggtcgagacggtgctcgcg
cgtgacaaaaactgggtgttttggaaaatgaccagctgcccgcccattgagcgggcaccc
gtggccgcggctgactttgtcgcggcccgaacgtcggcggagcgcatggcgacgagcaag
cgcctgcgcccgacgcccatgggcgccgtatccatggagtttctcaaccgggcggcgtcc
cagacgagcatggacgagctgcagccgcccgcacgatccgcgctgcccgcgctcgcgagt
ttcgagcggccgctcgccgacgacgactttgagattgccatgcccaccagcgacgtgacc
aaggcggccgccgtctacggcaagtcgagcaagagctggcgcgcgctacgcattgcggcc
cgcacgcgcctcgcggcttttgacaagattgacgaccccaacgccattgccgtcgtcttt
gctgagcccaccgaaagtgacgatgaagcggacggcgccgaggacgcagcggcgtcggag
gaagacatgccgcctagccgcgcgcctatcgtccttgtcggcgccgcgctagagacgctc
cgtgccgtcaccgccgcgctgctgaataagcacaagggcgtgtttgcggccgtcgtgcgg
cacacgacgcgcaccaaggccgacaacgagacgcacggcaaggcgtttcactttgtcagc
gcgccagactttggccagctccgcgacggcgaccgcctgatagagcatggcgtgcgcgac
ggcagcgactacggcacgagcaccaaggcgatcgacgccgtgacggaagccggcaaggtt
cccatcctccaactcgacaccgaggctgctcagttcgccaaggacatggatttcgaggcg
cgttacgttctcgtcggcccatctacttctgacggcgccgaggtctacgatgccgtcatc
gccgcggatagcgaggacgccgacaaggccgccgccgagctgagcgcctttctctacggt
ggcggtgccgagaacgaggaggaggccaaggctgatgctgagagctcctcggatgacagc
gacgaggacgaggacgaagaggatgaggcggccaatgcggatgccgagatggcagatgcg
gatggaaagccagaataa
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integrated database retrieval system
