Chlamydia muridarum Nigg: TC_0899
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Entry
TC_0899 CDS
T00028
Name
(GenBank) RNA polymerase sigma factor, sigma-54 family
KO
K03092
RNA polymerase sigma-54 factor
Organism
cmu
Chlamydia muridarum Nigg
Pathway
cmu02020
Two-component system
cmu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cmu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TC_0899
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
TC_0899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmu03021
]
TC_0899
Transcription machinery [BR:
cmu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TC_0899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_36
DUF4363
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AAF73614
UniProt:
Q9PJD0
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All DBs
Position
1042096..1043376
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AA seq
426 aa
AA seq
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MLHQHQTASVALCPALHIQQSLDMLQMPVAELSEFLSQQITINPCFDLDALDDLPDTCSF
FPISEHHPFTETLLSHLLHQIEVHFSLPQDRAIAQYIVGNLSPEGLFLEDPSLSASNLGV
SDVLFQKIWLRIQQFHPLGIASSSLQSYWLSLLDPSSHKEALMIIRQHFNRLARCDFAGI
SKKIQLPIAKILVFLRQALASIPWCPAAGFPNSLKTPSPALPDAYLSFSHEKSWEIFMNK
DSLPAIRLNSTVLHIYHTLPRDDKDHLSQQIRAAKQLLRNIKKREETLLAVLRVLIPYQE
EFLLKKRSVPKAFSVKQLARELSLHETTICRAINNKTLATPIGLISMRSLFPQAVGACPD
QSKATILHWIHQWISTEKNPLSDEAISQKIIAKGIPCARRTVAKYRSQLNIPPAHQRKHV
NASLVP
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgttgcatcagcatcaaacagcatctgtagctctttgtcctgctttacatattcaacaa
agtttggacatgctacagatgccggttgctgaactctcggaattcttatctcaacaaatc
actatcaatccttgtttcgatctcgatgccctggacgatcttccagacacatgttccttt
ttccctattagtgagcaccatcctttcacagagaccctattatcccatctacttcaccaa
atagaggtacatttttctctccctcaagaccgtgctatagcccaatacatcgtagggaat
ctttctcctgaaggactctttttggaagatccctctctctcggcttcaaatttaggagtt
tctgatgtcctttttcaaaaaatatggctacgcatccaacaatttcatcccctaggaatt
gcctcatcttctcttcaatcctattggctatctttactagatccttcttcgcataaagaa
gctttaatgattatccgacagcactttaatcgattagctcgttgtgattttgccggcatt
tctaagaaaattcagctgcccatagcaaagattcttgtatttcttagacaagctctagct
tccatcccctggtgtccagcagctggatttcctaattcacttaaaactccttctccagcg
cttcctgatgcctatctttctttctcacacgaaaaatcttgggaaatctttatgaacaaa
gattctcttccagctattagacttaatagtacggtgcttcatatttaccacaccctcccc
cgtgatgataaagaccacttatcacaacaaattcgtgctgcaaaacagctgcttcgcaat
ataaaaaaacgtgaagaaactttattagcagtccttcgcgttttaattccttatcaggag
gaattccttcttaaaaaacgttctgttccgaaagctttttcagtaaaacaactagctcgc
gaactctctcttcatgaaaccactatttgtcgggcaatcaataataagacgctcgcaaca
cctatcggattgatttctatgcggtcgctatttccacaagctgttggagcttgtcctgat
caatctaaagctactattttacattggatacatcagtggatatctacagaaaaaaatcct
ctatctgacgaggctattagccaaaaaattattgcgaaaggaattccttgtgcacgccgt
acagtagcaaaatatcggtctcaactaaacatccccccagcgcatcagcgtaaacatgtg
aatgcttctctagtgccataa
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