KEGG   Chelonia mydas (green sea turtle): 102930417
Entry
102930417         CDS       T02989                                 
Symbol
WHRN
Name
(RefSeq) whirlin isoform X1
  KO
K21879  whirlin
Organism
cmy  Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:cmy00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:cmy03037]
    102930417 (WHRN)
Cilium and associated proteins [BR:cmy03037]
 Primary cilia and associated proteins
  USH complex and associated proteins
   102930417 (WHRN)
SSDB
Motif
Pfam: PDZ PDZ_6 PDZ_2 HHD_RTEL1 USH1C_N DUF6288 CCM2_C
Other DBs
NCBI-GeneID: 102930417
NCBI-ProteinID: XP_037735846
LinkDB
Position
16:complement(7900463..8008213)
AA seq 975 aa
MRCLGGAHRPPAQGSGEMSAELDRTSVNSSCSSSPGPAAAAAAGTPSGAGSRLLSANVRK
LHHALTLLLSEPEREQFIHCLNVYHARRNVFDLVQTLRVLLDSPGKRQLLPMLRLVIPRS
DQLLFDQYTSEGLYLKPGFLPGCGAAGLGAPSPPAAGVWPQPAPLPPARRAPAGLGAPAA
EELRGEVREVSLKRNKTNDGLGFSIRGGAEHGVGIYVSLVEPGSLAEKEGLRVGDQILRA
NDKALDRVTHAEAVKALKGSKKLNLSVHSVGRIPGGYVTNHIYTWVDPQGRSASPPMGLP
QHQSSSLRKDGEKRSHLQLLQEGDEKKVNLVLNEGKSLGLMIRGGAEYALGIYITGVDKG
SEAESTGLKVGDQILEVNGRSFLSIPHDEAVKLLKSSRHLIMTVKDIGRLPHARTTVDET
QWIASSQIGETPVNTAGAAGDHTAEATAKPVFYRGLAGSQVTLSSLVNQTRVMLEAQARH
LLNEQERATMAYYLDEYKETNISVDSLVMALFELLNTHAKFSLLSEVRGVIAPQDLDRFN
TLVLKREIESMKARQPSVPSADSYSMTSYSDAGSSTCSHFTSTTVSSARERLLWLIDLME
NTADLEGGGEGLQSSINALPDISLDDVSSFPEEPPSFKPPPPPPAQELDSSTAQLAKVTP
KRPSSESSQSGLFFVAPPSPTPPPSHPDKDTASMTSTSASVSTEDSALSPVYAAVSPATL
SSGRHMGAHLSLVNQHPIGPFPRVQSPTRLKSPSPESTPVSSLPMPVPPPPASYPEPDKG
SLQSAINQHFVMVEVHRPNSEPDVNEVRSLPQARASTLSQLSDSGQTLSEDSGVDIGEVE
LSGRDKTQQQIPGKSRGPKEAPRSDGPAEAASKPPGLLEPTSCLIRVVKSAPTLGIAIEG
GANTRQPLPRIVTIQRGGSAHNCGKLKVGHVILEVNGTTLRGKEHREAARVIAEAFKTKE
KDHIDFLVTEFNVAL
NT seq 2928 nt   +upstreamnt  +downstreamnt
atgcgctgcctgggaggcgcacaccggccccccgcccagggcagcggggagatgagcgcc
gagctggaccgcacgtcggtgaactcctcctgctccagctccccgggcccggcggcggcg
gcggcggcggggaccccgtcgggggctgggagccggctgctctcggccaacgtgcggaag
ctgcaccatgccctgaccctgctgctgagcgagccggagcgggagcagttcatccactgc
ctgaacgtctaccacgcccgccgcaacgtcttcgacctggtgcagaccctccgcgtcctg
ctcgacagcccgggcaagcggcagctgctgcccatgctgcgcctggtgatcccccgctcc
gaccagctgctcttcgaccagtacacctcggaggggctctacctgaagcccggcttcctg
cccggctgcggcgcggcgggcttgggggcccccagcccacccgcggctggtgtctggccc
cagcccgctcctctgccccctgccaggagagccccggcggggctgggcgcccccgccgcc
gaggagctgcgtggggaggtgcgggaggtgagcctgaagaggaacaagaccaacgacggc
ttgggcttcagcatccgagggggcgccgagcacggggtgggcatctacgtctccttggtg
gagccgggctccctggcggagaaagaagggctccgggtcggggaccagatcctgagggcc
aacgacaaggccttggacagagtgacccacgccgaagctgtcaaggctctgaaaggctcc
aagaagctgaacctgtcagttcattcagttgggcggatccctgggggctatgtcaccaat
cacatttacacctgggtggatccccaggggcggagcgcgtccccgcccatgggcctgcct
cagcaccagagcagctccctgcggaaggacggcgagaagaggagtcacctgcagcttctg
caagagggggatgagaaaaaggtgaacctggtgctgaacgaagggaagtccttgggcctc
atgatccgaggaggagcagaatacgcgctgggcatttacatcaccggcgtggataagggc
tcggaagcggagagcaccggcctgaaggtgggagatcagatcctggaggtgaacggcaga
agcttcctcagcatcccccacgacgaggcggtgaagttgctgaagtcttcacggcacctc
atcatgaccgtgaaggacattggaaggctgccgcacgcccgcaccactgtggatgagacc
cagtggatcgcgagctcccagatcggagagaccccggtgaacacagcaggggcagctggt
gatcacacagccgaggcaacggcaaagcccgtgttttacaggggcctggctggctcccag
gtgacgctgagcagcctggtgaaccagacccgcgtcatgctagaggcgcaagctcgccac
cttctgaatgaacaggagcgggcgaccatggcctactacctggacgaatacaaggagacc
aacatttctgttgactccctcgtcatggctctcttcgagctactcaacacacacgccaag
ttctcgctgctatctgaggtgaggggggtgatagcccctcaggacctcgatcgcttcaat
accctggttctgaagcgggagatcgagtccatgaaggcccgacagccctcggtgcccagt
gccgactcctactccatgacgtcctacagcgacgccggctcctccacttgcagccacttc
acctccaccacggtcagctcggctcgggagcggctcttgtggctaatagacctgatggag
aacaccgcagacctggagggaggcggagagggactccaaagcagtattaatgccctgccg
gacatctccctggacgatgtttcgtctttccctgaggaaccgcccagctttaagccccca
cctcctcctccggctcaagagctggactcctccactgcccagctcgcgaaagtcacaccc
aagcgcccttcctctgaatcctcccagtcaggcctcttcttcgtggcccctcccagcccc
accccacctcccagccaccccgacaaggacacagccagcatgacttccacctcggcctct
gtgtccactgaggattctgccttgagtcccgtctatgccgccgtttcccctgccactctc
agctccgggaggcacatgggtgcccacttgtccttggtcaaccagcacccgataggcccc
ttcccccgagttcagtctccaaccaggctgaagagcccatctcctgagagcaccccagtc
agtagcctcccaatgcctgttcctccccctcccgcatcgtatccggagccagacaaaggc
agcctgcagtcagcgatcaaccagcacttcgtcatggtggaggtgcatcggcccaacagc
gagccggacgtgaatgaagtgagatccttgccccaagcccgagcctccacgctctcccag
ctgtcggacagcgggcagaccctcagcgaggacagcggggtggacatcggcgaagtggag
ctgagcggcagggacaagacccagcagcagatccctgggaaaagccgaggtcccaaggag
gcaccgagaagcgatgggccagcagaggcagcctccaaaccgcctggccttctggagccc
acatcgtgtctgattcgagtggtgaagagcgcgccgaccctggggatcgccatcgagggc
ggcgccaacacccggcagcctctgccccggatagtcaccatacagcgaggaggatctgcc
cacaactgcgggaagctgaaggtgggacacgtgatcctggaggtgaacggcacaacgctg
cggggaaaggagcaccgggaagccgcgcgtgtcatcgctgaggcctttaaaacaaaagag
aaggaccacatcgatttcctagtcactgagttcaacgtcgcactttag

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