Chelonia mydas (green sea turtle): 102932667
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Entry
102932667 CDS
T02989
Symbol
CNGB1
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
102932667 (CNGB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cmy04040
]
102932667 (CNGB1)
Ion channels [BR:
cmy04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
102932667 (CNGB1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
102932667
NCBI-ProteinID:
XP_043382400
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All DBs
Position
12:6304753..6401056
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AA seq
1294 aa
AA seq
DB search
MDATCGLRRSRCFEERVPWFPEMPVNQHRRPELILLQAGDRMLGWIERVVPHPPGAPHQP
PLVENGDKNAEPRVITVAPRPGGAEQLPKGNSTCPGKSSNCGQIEGAGKKVTFITAQEPG
PSSVSSAESAGRGVLSWLSQELGKVVPQPAHNPGMLQTVGKSFENSLDYPDQTEVQSIKE
DDDLLEITTLAPDEDELQDHSELHSSSDNNASEKGTGSRVISWLVQGFGKMIPQPENMNK
LEDVKEGKSEEATVREAERKVSKTRTALKGSSQASHSVSGTSQQASTDSLVGLGSSLFPQ
TLGGDSGRVFKWFVQGMEKVIPQPLARVKQDAQAAEVGTLCPVEEICVLPEGQVDLVMEE
VDTNWDNEAREEVMHWDNEAEFTVYAPPSHSRREEIQEEEKRLHLSCSQKGNEEEETKIA
GGELDECAWAAAGPGFEQLEEDQGAAPKGPLLQAPSIMSKQTRDVELDHLVHDQPLDRRS
SSPSFQGTVEQLPNVPSYRFSTASHIPVLISKKQKSGVVNPSFLNEEWSPAHPLEPSSSR
YPTVNIKDVDAKSSSAGVQKHDLRLPPPSRNNSHTLTVPGVPVAPKRRKLRSQEDSIDDL
IVPSPAKSPVRASPGRSNLQRKDLPKRVGSATSQNSSTINDRLQELVRLFKDRTEKVKEK
LIDPDTTSDDETPVASPSKKTSPEPVPPPERKETEAEVEEHYCEMLCCKFRCRPCLSHVR
KYRFPSSIDPLTNLMYVLWLFFVVLAWNWNCWLIPVRWAFPYQMPENLHWWLLVDYLCDL
IYFLDITVFQVRLQFVQGGDIITDKKAMRQNYLKSQRFKMDVFCLLPLDFFYFKVGVNSL
LRLPRCFKYMAFFEFNDRLEAILSKAYVYRVIRTTAYLLFSLHVNSCLYYWASSYQGLGS
TIWVYNGEGNSYIRCYYWAVKTLITIGGLPDPQTLFEILFQLLNYFTGVFAFSVMIGQMR
DVVGAATAGQTYYRSCMDSTIKYMNFYKIPKSVQNRVKTWYEYTWHSQGMLDESELMGQL
PDKMRLDIAIDVNYDIVSKVALFQGCDRQMIFDMLKRLRSVVYLPNDYVCKKGEIGREMY
IIQAGQVQVLGGPDGKTVLVTLKAGSVFGEISLLAVGGGNRRTANVVAHGFTNLFILEKK
DLNEILVHYPESQKLLRKKARKMLKNNNKPKEEKGMPKDTLIIPPRPGTPKLFQAALVAA
GKMGGKGKLAHIRWKLKELKAMQAMQEPKSTPVLLKLPVRHHSFKAPCKSSDHTDEEDII
SKSSDNSVSIRLSPAPQSNEQILSVEVSEKEEKK
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atggatgccacctgcggcctaagaagaagtagatgctttgaagagcgagtgccatggttt
cctgagatgcctgtaaatcaacacagacgacctgaactaattcttttgcaagcaggcgac
aggatgcttggctggatcgagagagtggtgcctcaccctcctggggcccctcaccagcca
cccctagtggagaacggagacaaaaatgcagaacccagggtgataactgtcgcacccagg
cctggaggggcagagcagctgccaaaaggaaactccacatgtccaggaaaatcttccaac
tgcggtcagatagagggggcagggaagaaagtgacattcatcacagcccaggagccaggc
ccatcatcagtgtcttcagctgaaagtgctgggaggggtgtactttcatggctgtctcag
gagctggggaaggtagtccctcagccagcccacaatccagggatgctgcagaccgttgga
aagagcttcgagaacagtttggactaccctgatcagactgaagtccagagcataaaggaa
gatgacgacctactagagataacaaccctcgctccagatgaggatgagcttcaggatcat
agcgagttgcattccagctcagataataatgcctcagaaaaagggactggcagcagggtg
attagctggctggtgcagggatttgggaaaatgatcccgcagccggaaaacatgaacaag
cttgaggatgtaaaggagggaaaatctgaagaggcaaccgtaagagaagcagaaaggaaa
gtgagtaagaccaggacagcactaaagggaagctctcaagcaagtcacagcgtatcggga
acctcacagcaggcatctacagacagcctggtgggactcggctcatctctctttcctcag
acgctggggggtgacagtggcagggtgttcaagtggtttgttcagggaatggagaaggtg
attccacagcctctggccagagtgaagcaagatgctcaggctgcagaagttggaaccttg
tgcccagtggaagagatctgtgtcctccctgaggggcaggtggatcttgtgatggaagag
gtagatactaactgggataacgaagccagagaagaagtgatgcactgggacaacgaggcc
gaatttacagtgtatgctcctcccagccactcccggagagaggaaattcaggaagaagaa
aagaggttgcacttatcatgttcccagaaaggtaatgaggaggaagaaacaaagattgca
ggtggcgagctggatgagtgtgcctgggcagccgctggcccgggttttgagcagctagaa
gaagaccagggggctgctcccaaaggccctttgctacaggctcctagcatcatgtccaag
caaaccagagacgttgagttagatcacctggtgcatgaccagccgcttgaccgcaggagc
tcctccccttccttccaaggcaccgtagagcagctacccaatgttcccagctaccgattc
tccaccgcctcccacatcccagtcctcatctccaaaaagcaaaagtctggtgtggtgaac
cccagttttttgaatgaggaatggtcccctgctcatcctttagagccatcatccagtaga
tatcccactgtaaacatcaaggatgtcgacgccaaaagcagctctgcaggggtgcaaaaa
cacgacctccgtctgcccccgccctcccggaataattcccacactctcacggtaccaggc
gtgcctgtggctccgaagaggaggaagctacgctcccaggaggacagcatagacgattta
attgtgccatccccagctaagtctccagtcagagcctcgcctggccggtccaacctacag
agaaaagacttgccaaagcgagtaggttcagcaacaagccagaacagttcaacaatcaac
gaccggctgcaggagctggtgaggctctttaaagacaggactgagaaagtgaaagagaaa
ctgattgacccagatactacctctgatgatgagacccctgtggcatctccttccaagaaa
acctctccagaaccagtaccaccaccagaacgcaaagagacagaagccgaagtggaggaa
cattactgtgagatgctgtgctgcaaattcagatgccgcccctgtttgagccatgtgaga
aagtaccggttcccgagcagcatagaccctctcaccaatttgatgtatgtgctgtggctg
ttctttgttgttctggcctggaattggaactgctggctgattccagtacgctgggccttt
ccataccagatgcctgaaaacctccattggtggctacttgtagactatctctgcgacctc
atctactttctggacatcactgtctttcaggtccgcctgcagtttgtccaaggaggagac
ataatcactgataaaaaggccatgcgacagaactacctgaaatcccaacgcttcaagatg
gacgtgttctgccttcttcccctggatttcttttacttcaaagttggcgtaaattctctc
ttgcggttgcctcgctgttttaagtacatggccttctttgagtttaatgaccggcttgaa
gctatcctgagcaaggcttatgtctacagagtgataaggaccacagcctatttactcttc
agcttacacgtgaactcatgcctgtattactgggcatcatcgtaccagggactgggttct
accatatgggtctataacggggagggaaacagttatatccgctgctattactgggctgtc
aagacgctaattactattggaggactgcctgaccctcaaactctgtttgagatactcttc
cagcttctgaactacttcacaggggtctttgctttctctgtcatgatcggccaaatgaga
gatgtagttggtgcggctactgcaggacaaacttattatcggagttgcatggacagtacc
attaaatacatgaatttctacaaaatccccaaatccgttcagaatcgggtcaaaacctgg
tatgaatacacttggcattcacaaggcatgttagacgaatccgagctgatggggcagctg
ccagacaagatgaggctggatattgctattgatgtcaactacgacatagtcagcaaggtg
gcgctctttcagggctgtgacaggcagatgattttcgacatgttgaagaggctccgatct
gttgtttacttacctaatgattatgtgtgtaagaagggggaaattggccgagagatgtac
attatacaagctggacaggtgcaggtgcttggaggacctgatggcaaaactgtgcttgtg
actctgaaagctggatctgtgtttggagaaataagcttgttggcagtgggaggtggaaat
cgtcgcacagcaaatgttgtggctcatggatttactaaccttttcatcttggagaagaag
gacttgaatgaaattttggtgcattatccagaatctcagaagctgctgcgtaagaaggcg
aggaaaatgctgaaaaataacaataaacccaaagaagaaaaaggcatgccaaaagatacg
cttatcattcctccaagacctgggacacctaaactctttcaagctgccctggtagctgca
ggaaagatgggaggcaaaggaaagcttgcccatatcagatggaaattgaaagagctgaaa
gcaatgcaagctatgcaggagcccaaatccactccagttctgctgaaattaccagttcgc
catcattcatttaaagcaccctgcaaatcaagtgaccacactgatgaggaggatatcatc
tcaaaatcttcagataattcagtctctattcgcttgagtcctgccccacaaagcaacgaa
cagattctttctgtggaggtttcagaaaaggaagaaaagaaatga
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