Chelonia mydas (green sea turtle): 102937708
Help
Entry
102937708 CDS
T02989
Symbol
TAF1
Name
(RefSeq) transcription initiation factor TFIID subunit 1 isoform X1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102937708 (TAF1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cmy01001
]
102937708 (TAF1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmy03021
]
102937708 (TAF1)
03036 Chromosome and associated proteins [BR:
cmy03036
]
102937708 (TAF1)
Enzymes [BR:
cmy01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
102937708 (TAF1)
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
102937708 (TAF1)
Protein kinases [BR:
cmy01001
]
Serine/threonine kinases: Other
TAF1 family
102937708 (TAF1)
Transcription machinery [BR:
cmy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
102937708 (TAF1)
Chromosome and associated proteins [BR:
cmy03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
102937708 (TAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
zf-CCHC_6
Cac1_C
Motif
Other DBs
NCBI-GeneID:
102937708
NCBI-ProteinID:
XP_037765667
LinkDB
All DBs
Position
9:101348861..101489038
Genome browser
AA seq
1960 aa
AA seq
DB search
MSDSESEEEAEGGRAGPFSLAGFLFGNINEAGQLEGESVLDKESKKHLAGLGALGLGNLI
TEITASEEDAAETDGAQLDEEGWVKSTEDAVDYSDINEVAEDESRRFRQAMGTLQPIRRP
DEDEDDYDADCEDIDSKLMPPPPPPPVKRDDEKDATAPVSEDGDGIILPSIIAPSSATSE
KADFSSSSDSESEMGPQDARQAESKEGKLTLPLAGIMQRDATKQLPSVTELFPEFRPGKV
LRFLRLFGPGKNVPSVWRSARRKRKKKHRELMQEVQIQEGDTATEAGMEEKSPWEYEFAP
PPPPEQCLSDDEITMMAPVESKFSQSTGDIDKVTDTKPKVSEWRYGPAQLWYDMLGIPED
GSGFDYGFKLKEHAREQETSGHSVEKNLGVMAEKDDLLADEHFLMVTQLQWEDDVIWNGE
DVKHKGTKTQRASLAGWLPSSMTRNATAYNAQQGLNRSGSLLNPPIPLVQKPSVAGVLGI
AKGKEKQPPEQQAALDEDKPWFSIFPIDNEELVYGRWEDNIIWDDQAMEMFLDPPVLTLD
PNDENIILEIPDEKEEMTLNSPSKENKKESSLKKSRILLGKTGVIKEEPQQNMSQPEVKD
PWNLSNDEFYYPKQQGLRGTFGGNIIQHSIPAVELRQPFFPTHMGPMKLRQFHRPPLKKY
SFGTLSQPGPHSVQPLLKHIKKKAKMREQERQASGGGEMFFMRTPQDLTGKDGDLILAEY
SEENGPLMMQVGMATKIKNYYKRKPGKDPGAPDCKYGETVYCHTSPFLGSLHPGQLLQAF
ENNLFRAPIYLHKMPETDFLIIRTRQGCYIRELVDIFVVGQECPLFEVPGPNSKRANTHI
RDFLQVFIYRLFWKSRDRPRRIRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDSNWWV
LKSDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFAPEEENEEDFQMKI
DDEVRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDKEPQP
VKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGP
MSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLESTEILSTDTDSSSAEDSDFEEMGKN
IENMLQNKKTSSQLSREREEQERKELQRMLLGEDSGNDKERSRKDRRDKKGLSSATGTSA
GSHKDDDTASVTSLNSSATGRRLKIYRTFRDEDGKEYVRCETVRKPSVIDAYSRIRTTKD
EEFIRKFALFDEQHREEMRKERRRIQEQLRRLKRNQEKEKLKGPPEKKPKKMKERPDLKL
KCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQEEELEKTVIHNDNEELIKVEGTK
IVLGKQLIESADEVRRKSLVLKFPKQQLPPKKKRRVGTTVHCDYLNRPHKSIHRRRTDPM
VTLSSILEGIINDMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSR
EEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDDD
DQVAFSFILDNIVTQKMMVVPDSWPFHHPVNKKFVPDYYKVIINPMDLETIRKNISKHKY
QNRETFLDDVKLILANSIKYNGPDSQYTKTAQEIVNICCQTLAEYDEHLTQLERDISTAK
EAALEEADLDSLDPMTPGPYTPQPPDLYDTNTSLSMSRDASVYQDESNLSAMDTPTTTPE
KRGTQMRQGRGRLGEEDSDVDIEGFDEDEDGKPKTPAPEVEDGDGDLADEEEGSAQQPQA
SVLYEDLLMSDGEDDDEGSDEEGDNPFSSIQLSESGSDSDVEPSAMRPKQPHVLQENTRM
GMENEESMMSYEGDGGETSHVMEDSNISYGSYEEPDPKSNTRDTSFSSIGGYEISEEEEE
EEEEQRCGPSVLSQVHLSEDEEDSEDFHSIAGDSDLDSDE
NT seq
5883 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactcggagagcgaggaggaggcggaggggggccgcgccgggcccttctccctg
gccggcttcctcttcgggaacatcaacgaggcggggcagctggagggggagagcgtcttg
gacaaggaatccaagaagcatttagccggtttgggcgccttggggctgggcaacctgatc
accgagatcacggccagcgaggaggacgctgcggagactgacggagcccagctggatgag
gagggctgggttaagagcacagaggatgctgttgattactcagatattaatgaggtggct
gaagatgagagtcgcagattcaggcaggcaatgggcacccttcagccaattcgaagacca
gatgaagatgaggatgattatgatgccgactgcgaagatattgattctaagctgatgccg
ccgccgcctccacctccggtaaagagagacgatgaaaaagatgcaacagcccctgtatct
gaagatggagatggtatcattctgccctccatcattgcgccgtcctctgctacctctgag
aaggcggatttcagcagttcttctgattctgagtcagagatgggaccccaagatgcaagg
caggcagaatccaaggaagggaaactgacactgcctcttgcaggaataatgcagcgagat
gccaccaaacagctgccgagtgttaccgagctgttcccggaattccggcccggcaaggtg
ctgcgttttctccgtctctttggccctgggaagaatgttccatctgtttggcgtagtgcc
cggaggaaacgcaaaaagaaacatcgggagctaatgcaagaagtgcagatccaggagggt
gacactgcaaccgaggcaggaatggaagagaagtctccctgggaatatgagtttgctcct
cctcctcctccggagcagtgcctctcagatgatgagatcactatgatggcacctgtggag
tccaagttttcccagtctactggagacatagacaaagtgacagataccaagcccaaggta
tctgaatggcgttatgggccagcccagctctggtatgatatgctggggattcccgaggat
ggcagtggatttgactatggtttcaaactaaaagagcatgcaagagaacaggagacttca
ggtcattctgtggagaagaacttgggagtgatggctgagaaggacgacttactggctgat
gagcacttccttatggtgacacagctacaatgggaggatgatgtaatctggaatggggag
gatgtcaaacacaaagggactaaaacacagcgtgcgagcctggcgggctggctgccctcc
agtatgaccagaaacgccactgcgtacaatgcccaacaagggctgaaccgtagtggctct
ttgctcaatccacccattccactagtgcagaaacccagtgtagcaggggtcctgggcatc
gcaaagggcaaagagaaacagcctcctgagcagcaagctgccctggatgaagataaaccc
tggttctccattttcccaattgataatgaggagttagtttatggccgttgggaagacaat
atcatctgggatgaccaggcgatggaaatgttcttggatcctccagtcctgacacttgac
ccaaatgatgaaaacatcatcctggaaattcctgatgaaaaggaagagatgactttgaac
tctccctccaaggagaacaagaaagaatcatctctaaagaagagtaggatcctgttggga
aaaacaggtgtcatcaaggaagaaccacagcagaatatgtctcagccggaggtgaaggat
ccctggaatctctccaatgatgagttttactatcccaaacagcaggggcttcgaggaacc
tttggagggaacatcatccagcactctatccctgcagtggaacttcgccagccattcttc
cccacccatatgggtcctatgaagctccgacaatttcatcgccctccattgaagaaatat
tcctttgggaccttgtcccagccaggaccccattctgtgcagccactgctgaaacatatc
aagaagaaagccaagatgagagagcaggagcggcaggcttcaggaggtggggagatgttc
ttcatgcgcacaccacaggacctaactggtaaggatggcgatctcatccttgctgagtat
agtgaggaaaatggtcctttaatgatgcaggttggcatggcaacaaagataaagaactac
tacaagcggaaacctggcaaggaccctggagcaccagattgtaaatacggagagactgtt
tactgtcacacatctccattcctgggatcactgcaccctggccagttactgcaggcattt
gaaaacaatctgttccgggctcctatttatctgcacaagatgccagaaacggatttccta
attatccggacacgacaaggctgttacattcgggagctggttgatatctttgtagttgga
caggagtgccccctctttgaagttcctggtcccaactccaaacgggccaatacccacatc
agagactttctacaggtcttcatttatcgcttgttctggaagagcagagaccggccgcgg
agaattcgcatggaggatatcaagaaggcatttccttcacactcagagagcagcattcga
aagcggctaaagctatgtgctgactttaaacgcacagggatggactcaaattggtgggta
ttaaagtcagacttcagattaccaacagaagaggaaataagagcgatggtgtccccagag
cagtgctgtgcctattatagcatgattgcagctgaacagcggctaaaggatgcaggttat
ggggaaaaatcgttctttgccccagaggaggagaatgaagaggacttccagatgaagatt
gatgatgaggtgcgcacagctccttggaataccacacgagccttcattgctgctatgaag
gggaagtgtcttctggaagtgactggtgtggcagatcctacaggttgtggtgaaggattc
tcttatgtgaagatccctaacaaaccaacccagcagaaggatgacaaggagccacagcca
gtgaagaagactgtgacaggaacggatgctgatctccggcgtctgtctctcaaaaatgcc
aaacagcttctacgtaaatttggtgttcctgaagaagagattaagaagctttcccgttgg
gaagtgattgatgtggtgcgcacaatgtccacagagcaggctcgctcaggggaggggcct
atgagtaaatttgcacgtgggtctcggttctcagtggcagaacatcaggagagatataaa
gaggagtgtcaacgcatcttcgacttgcagaataaagttttagaatcaactgagatcttg
tcaacagacacagacagcagctcagctgaggacagtgacttcgaggagatgggaaagaat
attgagaatatgttacagaacaagaaaaccagctcacagctgtctcgggagagagaagaa
caggagcggaaggagctgcagaggatgcttctgggagaagacagtggcaatgacaaagaa
aggagcagaaaggacaggagagacaaaaaaggattgtcatcagctacgggcacctcagca
ggctctcacaaagatgatgacactgcctctgtaaccagtctcaattcctctgccactggc
cgtcgcctcaaaatctatcgcacgtttcgagatgaggatgggaaagagtatgtacggtgt
gagacagttcgtaagccctctgtcattgatgcctacagccgaatacggaccaccaaggat
gaagagttcatacgaaaatttgccctctttgatgagcagcaccgggaggagatgcgaaag
gagcggcgcaggatccaggagcagctaaggcggctcaaacggaaccaggaaaaagaaaaa
ctcaagggcccaccagagaagaaacccaagaaaatgaaggagcggccagatctgaagtta
aaatgtggagcctgtggtgcaattggacacatgagaactaataagttctgtcccttgtac
taccaaacgaatgccccaccctccaaccctgttgccatgacagaggagcaggaggaagag
ctggaaaagacagtcattcacaatgataatgaagagcttatcaaagtggaggggaccaaa
attgtcctcggaaagcaactgattgagagtgcagatgaggttcgcaggaaatcactggtc
ttgaagttccctaaacagcagcttcctccaaagaaaaagcggcgagttgggaccactgtt
cactgtgattacttgaatcggcctcacaagtcaatccatcggcgacgaacggaccctatg
gtaactttgtcatccattctagagggcattatcaacgatatgagggatcttcccaataca
tacccatttcacacacctgttaatgcaaaggtcgtgaaagactattacaaaatcattaca
cggcctatggacctacagaccctgcgtgagaatgtccgcaaacgtctgtacccttcccgg
gaagagttccgtgaacatctggagctgattgtgaagaacagtgcaacgtacaatgggcca
aaacactcactgacccagatatctcagtccatgctggacctctgtgatgaaaaactaaaa
gagaaggaagataaactggctcggttagagaaagcaattaatcctctcctggatgatgac
gaccaagtggctttttccttcatattggataacatcgtcactcaaaaaatgatggtggta
ccagattcttggccgtttcatcatccagttaataaaaagtttgttccagattattacaaa
gtgatcatcaatccaatggacctagagaccatccgcaagaatatctccaaacacaagtat
cagaacagggagaccttcctggatgatgttaaactgatccttgccaacagcattaagtac
aatgggccggatagtcagtacacaaaaactgcgcaggaaattgtgaacatctgttgccag
actctggctgagtatgatgagcatttgactcagcttgaaagagacatctctactgctaag
gaagcagcactcgaggaggcagatttggacagtcttgaccctatgactcctggaccctac
acacctcagccaccagatttatatgataccaacacctctctcagtatgtcacgtgatgct
tcagtctatcaagatgagagcaacttgtctgctatggacactcccaccactaccccagag
aagcgggggacacagatgcgccagggacgaggtaggctgggcgaggaagactctgacgta
gatattgaagggtttgatgaggatgaggatgggaaacctaagactccagccccagaagtt
gaagatggggatggtgaccttgctgatgaagaagaaggctcagcacaacagccccaggcc
agtgttctttatgaagatttgcttatgtcagatggagaggatgatgatgaagggagtgat
gaagaaggcgataatcccttttcatctatccagctgagtgaaagtggcagtgattcagat
gtggagcccagtgcaatgagacccaaacaacctcatgtccttcaagagaacacacgaatg
ggcatggagaatgaagagagtatgatgtcctatgagggagatggcggggagacctctcat
gttatggaggacagtaatatcagttatggcagctatgaggagccagatccaaagtccaac
acacgagataccagctttagcagcattggagggtatgagatctctgaagaggaggaggag
gaggaggaagaacagcgatgtgggccaagtgtgttaagtcaggttcatctttcagaggat
gaggaagatagcgaggattttcactccattgcaggagatagcgacctggactcagatgaa
tga
DBGET
integrated database retrieval system
