Chelonia mydas (green sea turtle): 102938310
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Entry
102938310 CDS
T02989
Symbol
LAMA3
Name
(RefSeq) laminin subunit alpha-3 isoform X5
KO
K06240
laminin, alpha 3/5
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04382
Cornified envelope formation
cmy04510
Focal adhesion
cmy04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102938310 (LAMA3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102938310 (LAMA3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
102938310 (LAMA3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_I
Laminin_II
Laminin_G_3
EGF_laminin
EGF_LMN_ATRN
Sec10_N
WXG100
Motif
Other DBs
NCBI-GeneID:
102938310
NCBI-ProteinID:
XP_027675175
LinkDB
All DBs
Position
2:complement(79146406..79332389)
Genome browser
AA seq
1718 aa
AA seq
DB search
MTAEIQRPKNIGWLVVLLIALGHCLGQDVQQRLAFPHLQGRGQQQQIHLDFKPKEECSPG
FYRENKGLFTGRCVPCNCNGNSNRCQDGSGICIGCQHNTAGEKCDRCKEGYFGDASQGSC
RVCHCPYTNSFATGCVANGEEVQCFCKEGYTGVHCESCAPGYFGNPLKYGGYCQKCNCNN
NGQLVSCDRLTGECLNQDPKDVDPNEDCDACDSCVITLLKDLSEMSDELQLIKSQLQNVN
ASTHTLGQMRHLETRTKELKILLNRYRSAVLNQGSKADELETDLINLNQDVNALQEKAEM
NYRKAETLFNNFGQTNQKGKDLVSKIQIVIINIQVLVEQIAGTNAGGNTLPVGDAAKELA
EAEQMMREMRKRNFVQLQTDAERERREAQLLLERVRNELQKHQQENHGIVKTIRDSLNEY
ESKLNDLRKALNEATGQTKQAENLNKDNGVLLEDIKKQIEVMNKQQNDVLDHLNSARSSL
SQTNSILGLLQKSKEEYENLAAKLDGARKDLNEKLKNLSLSAGKEPLVVRAEEHAKFLQD
LARQLAEIKRNASNDELVNCAMEAATAYENIINAVSAAEEAANKAVNAADSALLTVERED
LAGKAKRLNTESSNLLNQAQMTQKTLQDINPTLEDIKQRLGIVEGKKNRMLTDLVSFQND
LSGINRDDIDSVITSAKNMVKNANDITANVLDELNPIKADVEKIKGTYGSTQSADFNKAL
TEANNSVKKLTSKLPDLFNKIESINQQLMPIGNISENVNRIRELIQQARDAANKVAIPMR
FNGRSGVEVRPPSDLEDLRGYTSLSFFLQRPLPRQDGLKQTSNMFVMYLGNKDASKDYIG
MAVRNGRLICVYNLGGNEAEIEVDPSVTESNTEEATLDRVKFERIYQYAKLNYVKAATSD
KKTFDSSSGSSHTLLNLDPSSVVFYVGGYAPDFQPPSALDYPRYQGCIELDNLNENVISL
YNFKRTFNLNTTEVEPCSRYKAESDQNYFEGTGYALVTAREANIPNLLYEQEIETTADEG
LVFFAENQDHFISLNIENGHLVFRYKLDSQPPKEIASKKAAVNDGTYKQIKLYISGRQKL
VSINPGIKANINVFKFTTYYLGGIPSSLRERFNISTSPFRGCMKNVKNPVTASVTFTETI
GVSRKCSNDWKLVRSATFSRNGILGLNAEGFPFPNNFQVGFSFHTLATSGTLLNYNIWPN
ILTIFLRDGFVVVRMTDEEKQSSKKYEDGSVHYVSVIKVGSMVRLLVDDLPVSMVVEPQG
TSRKLSQPIKLGGDNFEGCISNVFIQRTGQLPQVQNLINYTEKTGVSVGACRLYKSLQPM
LLKELADPNSSKIFKLQKKKNRASLTGAEVQLDQKSCALPTQLNFINGAYQFGNTPNSHL
LYTLSQASLTDRSHFSVDVRTASSGGLIFFVGNKPESSYIALYISKGRFVFSFGAGGKKI
KIKSKAKYNDGQWHTVVFNMDEKNGHLIIDGLRSREGKLASNSTFSTKPPVYLGGLPSLK
VQNIPRKSFVGCLRNFKMNGKLMNTPHRNTGVPPCLDGSLEPGIYFFNEEGYIVIDNSFV
MGLEFKIIFNIRVRSLTGVLLHTGNKQGNYLTVYMEAGKLTASGNNGAAEFQTSVTPQQS
LCDGQWHSIAVTQKQNIVHLDVDAKSNYTIGSSAPLSANVGHPLYFGRVPANLETPWLPV
RDSFLGCLQNIKINDKPVSVSKISEVHGAVSLTGCPAK
NT seq
5157 nt
NT seq
+upstream
nt +downstream
nt
atgacggccgaaatacagaggccgaagaacataggatggctagttgtcttgttaatagct
ctggggcattgcttgggacaagatgtacaacagaggctagcatttcctcacctgcagggc
agaggtcagcagcaacaaattcatttggattttaaaccaaaagaggaatgtagccctggg
ttttatcgtgagaataaaggattatttacaggacgctgtgtaccctgcaattgcaatgga
aattcaaatagatgccaggatggttctggaatatgtattggctgtcaacataatactgct
ggggaaaaatgtgaccgctgtaaagaaggttattttggcgatgccagtcaaggttcctgt
agggtgtgccattgtccttacacaaacagttttgcaactggctgtgtggcaaatggtgaa
gaagttcagtgtttctgcaaagaaggctatactggagtacattgtgaaagctgtgctcca
ggatattttgggaatccgctaaaatacggaggttactgtcagaagtgtaattgtaataat
aatggtcaactggttagctgtgatcgtcttactggagaatgcttaaaccaagatccaaaa
gatgtggatcccaatgaagattgcgatgcttgtgatagttgtgtaattactttgctgaaa
gatttgagcgaaatgagtgatgagcttcagctgattaaatctcagctgcaaaatgtcaat
gcaagcacccacacactggggcagatgaggcatttggaaacacgcaccaaggagttaaaa
atcttgttgaacaggtaccgttcagctgttctaaatcagggctcaaaggcagatgagttg
gagacagacttgatcaatcttaatcaggatgtaaatgctctacaagaaaaggctgaaatg
aattacaggaaagccgagacattatttaataattttggtcagactaatcaaaaaggaaaa
gatttggtttcaaaaatacaaattgtcatcatcaatattcaggtgctcgtggaacagata
gctggcaccaatgcaggaggtaacacattgcctgtgggggatgctgccaaggaactggct
gaagcagaacagatgatgagagagatgcgaaaacgcaactttgtacaactgcaaacagat
gcagaaagggagagaagagaagctcaactcttgctggagcgtgttaggaatgagctacaa
aagcaccagcaagaaaaccatggaattgttaaaacgataagagattcattaaacgaatat
gaatccaaactcaatgatcttcgtaaagctctcaatgaagcaactggccaaacgaagcag
gctgaaaacttaaacaaagataatggagtgctcttggaagacattaagaaacaaattgaa
gtgatgaataaacaacagaacgatgtcttggatcatctcaactctgcccggtcttccttg
tcccagactaacagcatacttggattacttcagaagagcaaagaggaatatgaaaatcta
gctgccaaactagatggagcaaggaaggacttgaatgaaaaactgaagaacctttcctta
tcagccggcaaagagccactggtggtgagggcagaggagcatgccaagtttttgcaagat
ctggcaagacaactggctgaaattaagagaaacgccagcaatgatgagttggtgaactgt
gccatggaagctgctactgcctatgaaaatattattaatgccgtcagtgcagccgaggaa
gcagccaacaaagctgtaaatgcagctgattcagctttactgactgtggagagggaagac
ctagcaggaaaagccaagagactgaacactgaaagcagcaatctattaaatcaagcacag
atgacacaaaagacattacaagatattaatccaactcttgaagatataaagcagagactg
ggtattgtggaaggaaagaagaacaggatgctgacggaccttgtttcttttcaaaatgat
ctcagtgggataaatagagatgacatagacagcgtcattaccagtgcaaagaacatggtc
aaaaatgccaatgatatcactgctaatgtactggatgaactgaacccaattaaagcagat
gtggaaaaaataaagggcacctatggaagcactcagagtgctgacttcaataaggctttg
acggaagcaaacaattcagtaaagaaattaacaagcaagctcccggatctgtttaacaag
attgagagcatcaaccaacagctgatgccaataggcaacatatctgagaatgtaaaccgc
ataagagagctcattcagcaggccagagatgctgcaaacaaggttgctattcccatgagg
ttcaatggtcgttctggagtagaggttcgacctccaagtgatcttgaggatttgagaggc
tatacttccctttcttttttcctccaaagacctctgccaagacaagatggcttgaaacag
acttcaaatatgtttgtaatgtacctgggtaataaggatgcttccaaggactacattggt
atggctgtgagaaatggtcgtctcatttgtgtttataacctgggaggcaatgaagccgaa
atagaagtggacccatcagtgactgagagtaacactgaggaagctactttggatcgggtg
aagtttgaaaggatttaccagtatgcaaagttgaattacgttaaagcagcaacctcagac
aagaagacttttgacagtagcagtgggagcagtcacacactcctaaatctggaccccagc
agtgttgtcttttatgtgggaggatacgcaccagattttcagcctcccagtgcactagac
taccctcgttaccaaggctgcattgaattagacaacctaaatgagaatgttattagcctg
tacaacttcaagaggacatttaatctcaataccactgaagtggagccatgcagtagatat
aaagcagagtctgaccaaaactattttgaaggcacaggctatgcacttgtcacagctaga
gaagcaaatattcctaatttgctctacgagcaggaaattgaaactactgcagatgaaggc
ttggtgttttttgcagaaaaccaggatcatttcattagtttgaatattgaaaatggccat
ctggtgttcagatacaaacttgactcacaacctccaaaggaaatagcaagcaagaaagca
gctgtaaatgatggaacatataagcaaattaaattatacatttctgggagacaaaagtta
gtttcgattaatcctgggattaaagccaacatcaatgtctttaaattcaccacatactac
ctgggtggaattccatcttctctgcgggaacgctttaatatctctacatctccattccgt
ggctgcatgaagaatgtaaaaaaccccgtcactgcatctgttacttttactgagaccatt
ggtgtcagtaggaagtgttccaatgactggaagcttgtgagatctgcaactttctccagg
aatggaatactgggtttgaatgctgagggtttcccatttcccaacaatttccaagtcgga
tttagctttcatacgttggcaaccagtggaacattattaaattacaatatatggcctaat
attcttaccatctttctgagagacggctttgtagtcgtaaggatgacagatgaggaaaaa
caatccagcaagaaatatgaagatggttcagtgcattatgtgtcagtaatcaaagttggc
agcatggtcaggctcctggttgatgacctgcctgtgtcaatggttgttgaacctcaagga
acgtcaagaaaattaagtcaacctataaaattgggtggtgataattttgaaggctgcatc
tccaatgtctttatacaaaggacaggtcagctcccgcaagttcaaaatctaatcaattat
actgagaagactggtgtatctgtgggagcctgcaggctgtacaagtcactccagccaatg
ctactgaaagaattagcagatcctaacagctctaagattttcaagttacagaagaaaaag
aaccgtgcttccctgacaggtgccgaagtgcagctagaccagaaaagctgtgctttacct
actcagctaaatttcatcaatggagcttatcagtttggcaacactcccaatagtcatttg
ctgtatacactttcccaggcatcactgacagacaggtcacatttttcagtagacgtacgg
actgcatcatcgggaggactgattttttttgtgggaaataagcctgagagctcttatata
gctctttacatttcaaagggacgttttgtcttttcatttggtgctggaggaaagaaaatt
aaaatcaaaagcaaagcaaaatacaatgatgggcagtggcatactgtggtattcaatatg
gatgagaagaatggccatcttattattgatggtctgaggtccagggaaggaaaactggca
agtaattccaccttcagcactaagcccccagtctatctgggtgggcttccatccctgaaa
gtacagaatataccaagaaagagttttgtaggttgcctgagaaattttaaaatgaatgga
aagctcatgaatactcctcatcggaacactggggtccctccatgtttggatggctctttg
gagcctgggatatatttctttaatgaagagggatatatcgtcattgataactcttttgtg
atgggtttggaatttaagatcatatttaacattcgtgtgagaagcctaacaggcgtcctg
ctccatactggaaacaaacaaggcaactatttaactgtttacatggaagcaggaaagctc
actgcctctggaaataatggtgctgcagagttccagacatccgtcactcctcagcagtct
ctgtgtgatggacagtggcactccatagcagtgactcagaaacagaacattgtgcaccta
gatgtggatgcaaagagcaactacaccattggatcctctgccccactttctgctaacgtg
ggtcatccgctgtattttggaagagttccagcaaatttggaaacaccgtggcttcctgtt
cgggactcgttccttggctgtctgcagaacattaaaataaatgacaaacctgtctctgtc
agcaaaatttcagaggttcatggtgcagtcagcttgactggatgccctgccaaataa
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integrated database retrieval system
