Chelonia mydas (green sea turtle): 102939478
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Entry
102939478 CDS
T02989
Symbol
TPCN1
Name
(RefSeq) two pore calcium channel protein 1
KO
K16896
two pore calcium channel protein 1
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
102939478 (TPCN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cmy04040
]
102939478 (TPCN1)
Ion channels [BR:
cmy04040
]
Voltage-gated cation channels
Calcium channel, two-pore (TPC)
102939478 (TPCN1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
SurA_N_2
Motif
Other DBs
NCBI-GeneID:
102939478
NCBI-ProteinID:
XP_007071957
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Position
15:6068233..6137019
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AA seq
811 aa
AA seq
DB search
MDDDVPLILTLDESGSNTSTPNEQLDREDLPNENGGSYDLVNDMSSPATGDYHSQQRSAR
HNWEMNYQEAAIYLQEGENNDKFFTHPKNAKALAAYLFVHNHLFYLMELTTALLLLLLSL
CEAPAVPILRLGIYIHATLELFALVVVVFELSMKMRWMGFYTYIRHKRTMVKTCVLLVQF
VEAIVVLVRQTSHVRITRALRCIFLVDCRYCGAVRRNLRQIFQSLPPFIDILLLLLFFMV
IFAILGFYLFSSNHSDPYFSTLENSLVNLFVLLTTSNFPDVMMPSYSQNPWSCVFFIVYL
SIELYFIMNLLLAVVFDTFSDIEKRKFKSLLLHKRTAIQHAYRLLVSKQRPSGISFKQFE
GLMRFYTPRMCARERYLTFKALNQSNTALVSLQDFYNFYEVVGLKWKAKRNREHWFDDLP
RTAFLIFKGINILVKSRAFQYAMYTVVAVNGIWILIQTFMLQGGNFFPRDVPWSYIVFLT
IYGVELLLKTTGLGPIEYLSSGWNLFDFSVTLFAFLGLLALAFNMEPFYFIVVLRPLQLL
RLFKLKKRYRNVLDTMFELFPRMASLGLTLLIFYYSFAIVGMEFFSGVVYPNCCNTSTVA
DAYRLVNHTVGNKTVVEEGYYYLNNFDNILNSFVTLFELTVVNDWYIIMEGVTSQTSHWS
RLYFMIFYIVTMVVMTIIVAFILEAFVFRMNYTRKNQGSEEDNGIVLEKEISKEEMAGVI
ELFRRNCAASETAPLQKVVAQMDKYEQTSMLFLGRRSRTKSDLSMKMYEEEIQEWYEEHS
RKEEYQWQEDVFPSGNPVPSSGLRQRSQTVI
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgacgttcccctcattctcactttggatgagagtggaagcaacacttcgaca
cccaacgagcagctggatcgggaggacctgcccaatgaaaatggaggcagctatgacctt
gttaacgatatgtctagcccagcaacaggggactaccattctcagcaaagatctgccaga
cacaactgggaaatgaactaccaagaggcagcaatctacctccaggaaggagaaaacaat
gataaattcttcacccaccccaagaatgccaaagcgctggctgcctacctctttgtacac
aatcaccttttctacctaatggagctgaccacggcactgctgctcctgctgctgtccctc
tgcgaggcccctgctgtccccattcttcgccttggcatctatatccatgctaccctggag
ctctttgcattagtggttgtggtctttgaactttccatgaaaatgagatggatgggcttc
tacacctatatcagacacaaaagaaccatggttaagacctgtgtgctgttagtgcagttt
gtagaagcaatagtggttttggtgcgtcagacctcgcacgtcaggataacaagagctttg
cggtgtatcttcttggtggactgtcgctactgtggagcggtcagaagaaatctgcggcag
atcttccagtctctccctcccttcattgacatcctcctcctccttcttttcttcatggtg
atctttgccatcctaggtttttatctgttttcctctaaccactcagatccctatttcagt
accttagagaacagccttgtgaatctcttcgttcttctgaccacttcaaatttccctgat
gtgatgatgccatcttactcccagaacccctggtcctgtgtcttcttcatagtatacctc
tccattgagctctacttcattatgaatttgcttcttgctgtggtgtttgacactttcagt
gatattgaaaagaggaagttcaagtctctgctgctgcacaaacgcacagccatacaacat
gcctaccgcctgcttgtcagcaagcagagaccgtctggtatctccttcaaacagtttgaa
gggctcatgcggttttatacgcctcggatgtgcgccagagagcgttatctcactttcaaa
gcactgaatcaaagcaatacagctttagtcagcctgcaggatttctacaatttctatgaa
gttgttggcttaaaatggaaggcaaaacgaaaccgcgagcactggtttgatgaccttcca
cggacagcgtttcttatatttaaaggcattaacattctggtgaagtcccgagcattccag
tatgccatgtatactgtggtagctgtgaatgggatctggattctaattcaaaccttcatg
ctgcaaggtgggaacttcttccccagagatgtcccgtggagttatatcgtcttcctcacg
atctatggggtagagctgctcctgaaaaccactggcctgggacccattgagtatctgtct
tctggatggaatctctttgatttttcagtcaccctgtttgcatttctgggtctcctggcg
ctggcatttaacatggaaccattctacttcatcgttgtcctgcgaccccttcaactgctg
aggctctttaaattgaagaagcgctacaggaatgtcctggacacaatgtttgagttattc
cctaggatggcaagcctgggcttaaccctacttatcttctactactccttcgccattgtt
ggcatggaattcttctctggggttgtctacccaaactgctgcaacacgagtacagttgca
gatgcctatcgcttggtgaatcacacggttggaaacaagacagtggtggaagaaggttac
tattatctcaacaactttgacaacattttgaacagctttgttacgctgtttgagttgaca
gttgtcaatgactggtacatcatcatggaaggggtgacctcacaaacctctcactggagc
cgcctctacttcatgatcttctatattgtgaccatggtggtgatgacgatcattgtggcc
tttatactggaggcttttgtgttccgcatgaactacacccgaaagaaccaaggttcagaa
gaagacaatggcattgtcctggagaaggagatctccaaggaggaaatggcaggtgtaatt
gagctcttcagacggaattgtgctgcctctgaaactgctccgctgcagaaggtcgttgca
caaatggacaaatatgagcaaacatcaatgctgtttctgggacggagatcaaggaccaaa
agtgacttaagtatgaaaatgtacgaggaggagatacaggagtggtatgaagagcattcc
agaaaagaagagtatcagtggcaagaagatgtcttcccatccggcaaccccgtgccatcc
tcgggcctcaggcagcgctcacagacagttatctag
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