Chelonia mydas (green sea turtle): 102940288
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Entry
102940288 CDS
T02989
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X4
KO
K04834
voltage-gated sodium channel type II alpha
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cmy04040
]
102940288
Ion channels [BR:
cmy04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
102940288
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQCJ-SCHIP1
ATP-synt_B
IQ
Neur_chan_memb
HB_ELP1
K_channel_TID
Motif
Other DBs
NCBI-GeneID:
102940288
NCBI-ProteinID:
XP_007056692
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Position
11:35747622..35871888
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AA seq
2008 aa
AA seq
DB search
MAQSVLVPPGPDSFHYFTRESLAAIEQRIAEEKAKKSKQERKDDDDENGPKPNSDLEAGK
TLPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNRGKAIFRFSATSAVYMLTPFNPLRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPEWTKNVEYTFTGIYTFESLVKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCLQWPPDNSTLEINVISYFNSTI
GENGSFVNTTVSTFNWEEYIEDRSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAAVAADSREFSGVGG
VGGFSESSSEASKLSSKSAKERRNRRKKRKQKEQSEGEEKDEEDFHKSESEDSMRRKGFR
FSIEGNRLTYEKRFSSPHQSLLSIRGSLFSPRRSSRTSLFSFRGRAKDVGSENDFADDEH
STFEDNESRRGSLFVPHRHGERRNSNISQASRSSRMVPALPANGKMHSTVDCNGVVSLVG
GPPALTSPTGQLLPEGTTTETELRKRRTSSYHVSMDFLSEPSARQRAMSIASILTNTMEE
LEESRQKCPPCWYKFANTCLIWDCCTPWLRVKHIVNLIVMDPFVDLAITICIVLNTLFMA
MEHYPMTEQFSHVLSVGNLVFTGIFTAEMFLKIVAMDPYYYFQEGWNIFDGFIVSLSLME
LGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAV
VGMQLFGKSYKECVCKISNDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQA
MCLIVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVARIQKGIDYV
KRKAREFIQKAFVRKQKALDEIKPLEDLNNKKDSCISNHTVIEIGKDLNYLKDGNGTTSG
VGSSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESDLEESKEKLNA
SSSSEGSTVDIGLPQEGEQPEIEPEEALEPEACFTEGCVRKFKCCQVSTEDGKGKIWWNL
RKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEM
LLKWVAYGFQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRAL
SRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCVNTTNDERFDI
SQINNYSQCEDLINNNETARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRKV
LDQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKY
YNAMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQVFDISIMILICLNMVTMMVETDNQSD
EMQDNLWWINLVFIVLFTGECILKLISLRYYYFTIGWNIFDFVVVILSIVGMFLADLIEK
YFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIF
GMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGEPDCDPYKDH
PGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEM
FYEVWEKFDPDATQFIEFSKLSDFAASLDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDI
LFAFTKRVLGESGEMDTLRIQMEDRFMAANPSKVSYEPITTTLKRKQEEVSAVIIQRAFR
RYLLKQKIKKVSCMFNQDKDKDEDDLPIKEDMIIDKLNENSTPEKTDMTPSTTSPPSYDS
VTKPDKEKYEKDKSEKEDKGKDVRESKK
NT seq
6027 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatcagtgctggtaccaccaggacctgacagcttccactatttcacgagagag
tcacttgcagctatcgaacaacgtattgctgaagaaaaagctaagaagtctaaacaagaa
cgtaaagatgacgatgatgaaaatggaccaaaaccaaacagtgacctggaggcaggaaag
acactgccatttatttacggcgacatacctccaggaatggtgtctgagcccttggaggat
ctggacccatattatatcaataaaaaaacttttatagtattgaatagagggaaggcaatc
ttccgattcagtgccacctctgctgtgtacatgttaactcccttcaatcctcttagaaaa
atagctattaaaattttggtacattcattgttcagcatgcttattatgtgcactattttg
accaactgtgtatttatgactatgagtaaccctccggaatggacaaagaatgtagaatac
acattcacgggaatttatacctttgaatcacttgtaaaaattcttgcaaggggcttctgt
ttagaagattttacttttcttcgagacccatggaattggctagatttcactgtcattacg
tttgcgtatgtaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcaga
gtattgagagctttgaaaactatttctgtaatcccaggcttgaagactatcgtgggagcc
ctcattcagtctgtgaagaagctctcggatgtaatgatcctgactgtgttttgtctgagt
gtatttgcactaatagggctgcagctgttcatgggcaacttgaggcacaaatgcttgcag
tggcctccagacaattctactttggaaataaatgttatttcctactttaatagcacaata
ggcgaaaatggatcatttgttaatacaacagtgagcacatttaattgggaggagtacatc
gaggatagaagtcatttttactttttggaaggacagaatgatgctctgctgtgtggcaat
agctcagatgcaggtcaatgtccagaaggatatatatgtgtaaaagctggtagaaacccc
aactatggctacacgagctttgacacattcagctgggcgtttttgtcactctttcgactg
atgactcaggacttttgggagaatctttatcagctgacgctacgtgctgctggcaaaaca
tacatgatattttttgttctggtaattttcctgggttctttctatctgattaacttgatc
ctggctgttgttgctatggcctatgaagaacagaatcaagcaaccatggaagaagcagag
cagaaggaggcagaatttcagcagatgcttgaacagttgaaaaaacaacaagaagaagct
caggcagcagcagcagctgcagtagcagctgattcaagagagttcagcggagtaggtggg
gtaggaggattctctgaaagttcttctgaagcatcgaagttgagttcaaagagtgctaaa
gagagaaggaacagaaggaagaagagaaaacagaaggaacagtctgaaggagaggagaaa
gatgaggaagattttcacaaatctgaatcagaagatagcatgagaaggaaaggtttccga
ttctccattgaagggaacaggctgacatatgaaaagaggttctcttctccacatcagtct
ttgctgagcattcgtggctccctgttttccccaaggcgcagcagcagaacgagtcttttc
agcttcagaggtcgagcaaaggatgtaggatcagaaaatgactttgctgatgatgaacat
agcacttttgaagacaatgagagtagaagaggttctctctttgttccacatagacatggt
gaacggcgcaacagtaacattagtcaggccagtaggtcatccagaatggtaccagcgctt
ccagcaaatgggaagatgcacagcactgtagattgcaatggggtggtttctttagttggt
ggacctccggctctcacgtcacctactggacagcttctcccagagggtaccacaacagaa
acagaattaagaaagagacggacaagttcttaccacgtttctatggatttcctgtcagag
cccagtgcaagacaaagagcaatgagtatagccagcatactcacaaacacaatggaagaa
cttgaagaatccaggcagaaatgcccaccatgctggtataaatttgctaacacatgcttg
atctgggattgctgcactccatggttaagagtaaaacatattgtaaatttgattgtgatg
gatccatttgtcgatcttgctattactatctgcattgttttaaacacattgtttatggcc
atggagcattatccaatgacggaacagtttagtcacgtgctttcagtaggaaatctggtc
tttactggcatcttcacagcagaaatgtttctcaagatagttgccatggatccttattat
tatttccaagaaggctggaatatttttgatggttttattgtgagccttagtttaatggag
cttggtcttgcaaatgtggaaggattatctgttctcagatcattcagattgcttcgagtt
ttcaagttggcaaaatcttggccaacactgaatatgctgataaagattattggtaattca
gtgggggctttgggaaatttgacattggtgctggccatcattgtcttcattttcgctgtg
gttggtatgcagctgtttggtaaaagctacaaggaatgtgtctgcaagatctccaatgac
tgtgaacttccacgctggcacatgcatgacttcttccactctttcttgattgtattccga
gtactatgtggagaatggatagagactatgtgggattgtatggaggttgcggggcaagcc
atgtgccttattgttttcatgatggtcatggtgattggaaacctagtggtactcaatctc
tttctggctttactgctgagctcatttagttcagacaaccttgcggctacagatgatgat
aatgaaatgaacaatctccaaattgcagtggcaaggattcagaagggaatagattatgtg
aaaagaaaagcacgtgaattcatccaaaaagcctttgttagaaagcagaaagctttagat
gaaatcaagcctcttgaagatctaaacaacaaaaaagacagctgcatttccaaccatact
gtcatagaaataggtaaagaccttaactatcttaaagatgggaatggaactaccagtggc
gtaggcagcagcgtggaaaaatatgtcgtcgatgaaagtgattatatgtcattcataaat
aatccaagcctcactgtgacagtaccaattgctgttggggaatcagattttgaaaattta
aatacggaagagtttagcagcgagtcagatctagaggaaagcaaagagaagctaaatgca
tccagctcatctgaaggtagtacagttgatattggacttcctcaagaaggagaacagcca
gagatagaacctgaagaagctcttgaaccagaagcctgttttacagaaggctgtgtacgg
aagttcaagtgctgtcaagtcagcacagaagatgggaaaggaaaaatatggtggaatctt
aggaaaacctgctacaagatagttgaacacaactggtttgagaccttcattgtcttcatg
attctcctcagcagtggtgctctggcttttgaagacatatacattgaacagcgcaagact
atcaagaccatgctggagtatgctgataaggtcttcacttacatcttcattctggaaatg
cttctaaaatgggtggcttatggttttcaaacctatttcactaatgcctggtgctggctg
gacttcctgattgttgatgtctctttggttagcttaacagctaatgccttgggctactca
gaacttggtgcgattaaatcccttaggacattaagagctttgagacctctaagagccttg
tcacgatttgaagggatgagggtcgttgtgaatgccctcttaggagcaattccatccatt
atgaatgtgcttcttgtttgtcttatattctggctaatcttcagcatcatgggagtaaat
ctgtttgctggcaaattctactattgtgttaataccacaaatgatgagaggtttgatatc
agccaaatcaacaattatagccaatgtgaggacctcataaacaacaatgaaactgccaga
tggaaaaatgttaaagtaaactttgataatgtaggacttggctatctttctctgcttcaa
gtagccacatttaaaggatggatggatataatgtatgcagctgtggattctcgaaaggta
ttggatcagcctaagtatgaggacaacctgtacatgtatctttactttgtcatcttcatc
atctttggatcattctttaccctgaaccttttcattggtgtcatcatagataatttcaac
cagcaaaaaaagaagtttggaggccaagacatctttatgacagaagaacagaagaaatat
tacaatgcaatgaaaaagcttggttcaaagaagccacaaaaacctatacctaggccagcg
aacaaattccaaggcatggtctttgattttgtgacaaaacaagtatttgacatcagcatc
atgattcttatctgccttaacatggtcaccatgatggtagaaacagacaaccagagtgat
gagatgcaagataatttatggtggattaaccttgtgttcattgtccttttcactggagaa
tgtattctgaaactgatttcacttcgttattactacttcaccataggctggaacattttt
gattttgtagttgtcattctttccatagtaggtatgtttctagctgacctgattgaaaaa
tattttgtgtcccccaccttgttcagagttatccgactcgccagaataggtcgaatcctg
cgtctcattaagggtgctaaaggaatccgcactctgctttttgctttgatgatgtctctt
cctgctttgtttaacataggtctcctgcttttcctggtcatgtttatctatgctatattt
ggaatgtccaactttgcctacgttaagagggaagttgggattgatgacatgttcaacttt
gaaacttttggcaacagtatgatctgcctatttcaaattaccacatcagctggttgggat
ggtttgttagcaccaattctgaacagtggagaaccagactgtgacccttacaaagatcac
ccaggaagctctgttaaaggagactgtggtaacccttcagttgggattttcttttttgtc
agttatattatcatctcatttctagttgtagtaaacatgtatattgctgttattttggag
aacttcagtgttgctacagaagaaagtgccgagcccttgagtgaggatgactttgagatg
ttctatgaggtttgggaaaagtttgatccagatgccacccagttcatagagttcagtaaa
ctatctgattttgcagcttcactggatcctcctcttcttatagcaaaaccaaacaaagtt
cagcttattgcaatggatcttcccatggtaagtggtgacagaattcactgccttgacatc
ttgtttgcttttacaaagcgtgttttgggggaaagtggagaaatggatacacttcgaata
caaatggaagatcggtttatggcagcaaatccttctaaagtctcctatgaaccgattaca
accacattaaaacgaaaacaagaggaagtatctgctgtcattattcagcgagctttcaga
cgttaccttttaaagcaaaaaattaaaaaagtttcatgtatgtttaaccaagataaagat
aaagatgaggatgacctgcctatcaaagaagatatgattattgataagctaaatgagaac
tccactccagaaaaaacagatatgaccccttccacaacctctccaccttcctatgatagc
gtaacaaagccagacaaagagaaatatgaaaaagacaaatcagaaaaagaagacaaaggt
aaagacgtcagggaaagtaaaaagtaa
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integrated database retrieval system
