Chelonia mydas (green sea turtle): 102941549
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Entry
102941549 CDS
T02989
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X2
KO
K04834
voltage-gated sodium channel type II alpha
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cmy04040
]
102941549
Ion channels [BR:
cmy04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
102941549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
FraC
Motif
Other DBs
NCBI-GeneID:
102941549
NCBI-ProteinID:
XP_027674797
LinkDB
All DBs
Position
11:complement(35618220..35730184)
Genome browser
AA seq
2009 aa
AA seq
DB search
MAQALLVPPGPDSFCYFTRESLAAIEKRATEEKAKKPKQDHTDDDDEDGPKPNSDLEAGK
TLPFIYGDIPPGMVSEPLQDLDPYYINKKTFIVLNKGKTIFRFSATSALYILTPVNPVRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPEWTKNVEYTFTGIYTFESLIKILARGFC
LEGFTFLRDPWNWLDFSVILMAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCLQWPPDNSTFEVNITSYLNSTM
DVNGTFVNTTVSTFNWKEYIEDETHFYILEGQRDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLVNLI
LAVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEEAQATAAVAAASVASRDLSGVG
GLGELLESSSEASKLSSKSAKERRNRRKKRRQKELSEAEDKGDVEKFPKSESEDSIRRKS
FRFSMEASRLTYEKRFTSPHQSLLSIRGSLFSPRRNSRTSIFSFRGRAKDIGSENDFADD
EHSTLEDNESRRESFFAPNRHGERRNSNISEASRSSRMVTALPPNGKMHSTVDCNGVVSL
VGGPSALTSPTGQLLPEGTTTETEIRKRRLSSYQISMEMLEDSTARQRAMSIASILTNTM
EELEESRQKCPPCWYRFANTFLIWDCWSPWLKVKHIVNLVVMDPFVDLAITICIVLNTLF
MAMEHYPMTEQFSSVLTVGNLVFTGIFTAEMVLKIIAMDPYYYFQEGWNIFDGIIVSLSL
MELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIF
AVVGMQLFGKSYKDCVCKIATDCVLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAG
QAMCLIVFMLVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVARIQKGID
YVKKKLREFVQKAFVRKQKALEEIKAFEDLNNKKDSCICNHTVVEISKDLNCLRDGNGTT
SGVGTGSSVEKYVVDENDYMSFINNPGLTVTVPMAIGESDFENLNTEEFSSESDIEESKE
KLNASSSSEGSTVDIAPPGEGEQAEIEPEEALEPIACFTKGCVQKFTCCQVSIEDGKGKI
WWNLRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIF
ILEMLLKWVAYGFQMYFTNAWCWLDFLIVDVSLVSLIANALGYSELGAIKSLRTLRALRP
LRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNTTTGE
MFDISDVDNYTQCEDLIKKNESARWKNVKVNFDNVGAGYLALLQVATFKGWMDIMYAAVD
SRDLLDQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEE
QKKYYNAMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQVFDISIMILICLNMVTMMIETD
DQSDEMETILHRINLVFIVLFTGECVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAK
VIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFI
YAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGEPDCDP
YKDHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSED
DFEMFYEVWEKFDPDATQFIEYSKLSDFAASLDPPLLIAKPNKVQLIAMDLPMVSGDRIH
CLDILFAFTKRVLGESDEMDALRIQMEDRFMAANPSKVSYEPITTTLKRKQEEVSATVIQ
RAYRCYILKQKVKKVSCVYNKDKTKGDGLPVKDMITDKLNENSTPEKTYESSSTTSPPSY
DSVTKPDKEKYEKDKVEKDYKSKNVRQSK
NT seq
6030 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggcattgctggtaccaccaggacctgacagcttctgctattttactagagaa
tctctcgcagctattgaaaagcgtgccacagaagaaaaagctaaaaaacccaaacaggat
catacagatgacgatgatgaagatggcccaaagccaaatagtgacttggaagcaggaaag
acactgccatttatttatggtgacatacctccgggaatggtgtctgagcccttgcaggac
ctggacccatattatatcaataaaaaaactttcatagtactgaataaaggaaagacaatt
ttccgattcagtgccacatctgccttgtacattttaactcctgtcaaccctgttagaaaa
attgctattaagattttggtacattcattattcagcatgcttattatgtgcactattttg
accaactgtgtatttatgaccatgagtaaccctccggagtggacaaagaatgtagagtac
acgttcactggaatttatacctttgaatcgcttataaaaattcttgcaaggggcttctgt
ttagaaggttttactttccttcgtgacccatggaactggcttgacttcagcgtcattttg
atggcgtatgtaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcaga
gtattgagagctttgaaaactatttctgtaatcccaggcttgaagactattgtaggagcc
cttattcagtctgtgaagaagctctcggatgtaatgatcctgactgtgttttgtctgagt
gtatttgcactaatagggctgcagctgttcatgggcaacttgaggcataaatgcttgcag
tggcctccagacaattccacttttgaagtaaacattacttcctacttgaatagcacaatg
gacgtaaatggtacctttgttaatacaactgtgagcacgtttaactggaaggagtacatt
gaggatgaaactcatttttacattttggaaggacaaagagatgccctactttgtggtaat
agctctgatgcaggtcaatgtccagaaggatatatatgtgtgaaagctggtagaaacccc
aattatggctacacgagctttgacacattcagttgggcgttcttgtcactctttcggctg
atgactcaggacttctgggaaaatctttatcagttgacgctacgagctgctggaaaaaca
tacatgatattttttgttctggtgatttttttgggctctttctatctggtgaatttgatc
ctggctgttgttgctatggcctatgaagaacagaatcaagcaaccctggaagaagcagag
cagaaagaggcagaatttcagcagatgcttgaacagctaaaaaaacaacaagaagaagct
caggcaacagcagcagtagcagcagcgtcagttgcgtcaagagatttgagtggagtaggg
ggactaggggagctcttggaaagttcctcagaagcatcgaagttgagctcaaagagtgct
aaagaaaggagaaacagaaggaagaaaagaagacagaaggaactgtctgaagcagaggac
aaaggagatgttgaaaagttccccaaatctgaatcagaggacagtatcagaaggaaaagt
ttccgattctcgatggaagcgagtcgactgacatatgaaaagaggttcacttccccccac
cagtctttgctgagtattcgtggctccctgttttccccaaggcgcaacagcagaacgagc
attttcagcttcagaggtcgagcaaaagatataggatcagaaaatgactttgctgatgat
gaacacagcactcttgaagacaatgagagcagaagagagtctttctttgctccaaacaga
catggtgaaagacgcaacagtaacattagtgaagccagtaggtcatccaggatggtgaca
gcgcttccaccaaatgggaagatgcacagcactgtagattgcaatggggtggtttctttg
gttggaggaccttcagctctcacttcgcctactggacaacttctcccagagggcaccact
acagaaacagaaataagaaaaagaagattgagttcttatcaaatttccatggaaatgttg
gaagattctactgcaagacaaagagcaatgagtatagccagcatactcacaaacacaatg
gaagaactcgaagaatccagacaaaaatgtccaccgtgctggtacagatttgcaaacact
ttcttgatctgggactgctggagcccatggttaaaagtaaaacatatagtcaatttggtt
gtgatggatccatttgttgatcttgctattactatctgcattgttctaaacacattgttt
atggccatggaacactacccaatgacagaacagttcagcagtgtgctgactgtgggaaac
ctggtatttactgggatcttcacagcagaaatggttttaaagataattgccatggaccct
tattattatttccaagaaggctggaatatttttgatggtattattgtcagccttagttta
atggaacttggtcttgcaaatgttgaaggattatcagttctccgatcattcagattgctc
cgagtattcaagttggcaaaatcttggccaacactgaatatgctgataaagattattggt
aactcagtgggggctttgggaaatttgaccttggtgctggccatcattgtcttcattttc
gctgtggttggtatgcagctgtttggtaaaagctacaaagactgtgtctgcaagattgct
acagactgtgtacttccacgctggcacatgcatgactttttccactcttttttgattgta
ttccgagtgctgtgtggagaatggatagagactatgtgggactgtatggaggttgcaggc
caagccatgtgccttattgttttcatgctggtcatggtcattggaaaccttgtggtattg
aacctgtttctggccttgctactgagttcatttagttcagataaccttgctgctacagat
gatgataatgaaatgaacaatctccagattgccgttgcaaggattcagaagggaatagat
tatgtgaaaaaaaaattacgggaattcgtccaaaaagcctttgttagaaagcaaaaagca
ttagaggaaatcaaagcatttgaagatctaaacaacaagaaagacagctgcatttgcaac
catactgtcgttgaaataagcaaagatcttaattgtcttagagatgggaatggaactacc
agtggtgtaggaacaggcagcagtgtggaaaaatatgtagttgatgaaaatgattatatg
tctttcataaacaatccgggccttactgtgacagtacctatggctattggagaatcagat
tttgaaaatttaaacacagaagagtttagcagtgagtcggatatagaagaaagcaaagag
aagctaaatgcatccagctcatccgaaggcagcacagttgatattgcccctcctggagag
ggcgaacaagctgagattgaacctgaagaagctcttgaaccaatagcctgttttacaaaa
ggttgtgtgcagaagttcacatgttgtcaagtaagtatagaagatggcaaaggcaaaatc
tggtggaatcttaggaaaacctgctacagcatagttgaacacaactggtttgagacattc
attgtcttcatgattcttctgagcagtggcgctctggcttttgaagacatatatatagag
cagcgcaagactatcaagaccatgctggaatatgctgacaaggttttcacatacatcttt
attctggaaatgcttctgaaatgggttgcctatggttttcaaatgtatttcactaatgcc
tggtgctggctggacttcttgattgttgatgtgtcgttggttagtctaatagccaatgcc
ttgggctattccgaacttggtgccattaaatcgcttaggacactaagagctttgagacct
ctaagagccttgtcacgatttgaagggatgagggtggttgttaatgccctgataggagca
attccatccatcatgaatgtgctactggtttgtctgatattctggctaatcttcagcatc
atgggagtaaatctgtttgctggcaagttctaccactgtgttaacacaacaactggtgag
atgtttgatatcagcgatgttgacaattatactcagtgcgaggacctcataaaaaagaat
gaaagtgcccggtggaaaaatgtgaaagtaaacttcgataatgtaggcgctgggtatctt
gcactgcttcaagtagctacatttaaaggatggatggatattatgtatgcagctgttgat
tcacgagatctactagatcagcctaagtatgaggacaacctgtacatgtatctttacttt
gtcatctttatcatcttcggatcattcttcaccttgaaccttttcattggtgtcatcata
gacaacttcaatcaacaaaaaaagaagtttggaggtcaagatatatttatgacagaagaa
cagaagaaatactacaatgcaatgaaaaaactggggtccaagaaaccacaaaaacctata
cctaggccagcgaacaaattccaaggcatggtctttgattttgtaacaaaacaagtattt
gacatcagcatcatgattcttatctgccttaacatggtcaccatgatgatagaaacagat
gaccagagtgatgaaatggaaactattttacacaggataaacctggtattcattgtcctt
ttcactggagaatgtgtcctgaaattgatttcactccgttattactacttcaccataggc
tggaacatttttgattttgtggttgtcattctctccatcgtgggtatgtttctagctaag
gtgattgaaaaatattttgtgtcccctaccttgttcagagttatccgactcgccagaatt
ggtcgaatcctgcgtctcattaagggagctaaagggatccgtactttgctttttgctttg
atgatgtctcttcctgctttgtttaacattggtctcctgcttttcctggtcatgtttatc
tatgctatatttggaatgtccaactttgcctacgttaagagggaagttgggattgatgac
atgttcaactttgaaacttttggcaacagtatgatctgcctatttcaaattaccacatca
gctggttgggatggtttgttagcaccaattctgaacagtggagaaccagactgtgaccct
tacaaagatcacccaggaagctctgttaaaggagactgtggtaacccttcagttgggatt
ttcttttttgtcagttatattatcatctcatttctagttgtagtaaacatgtatattgct
gttattttggagaacttcagtgttgctacagaagaaagtgccgagcccttgagtgaggat
gactttgagatgttctatgaggtttgggaaaagtttgatccagatgcaacccagtttata
gaatacagtaaactatctgattttgcagcttcactggatcctccccttcttatagcaaaa
ccaaacaaagttcagcttattgcaatggatctgcccatggtaagtggtgacagaattcac
tgtcttgacatcttgtttgcttttacaaagcgtgttttgggggaaagcgatgagatggat
gcacttcgaatacaaatggaagaccggtttatggcagccaatccttctaaagtctcctat
gagccaattacaactacattaaaaagaaaacaagaggaggtttctgctactgttattcag
cgtgcttacagatgttatattttaaagcaaaaagttaaaaaagtctcctgtgtgtataac
aaagataaaaccaaaggggatggcctacctgtcaaagatatgattactgataaactcaat
gaaaactccactccagaaaaaacatacgagagctcctctacaacctctccaccttcctat
gatagtgttacaaagccagacaaagagaaatatgaaaaagataaagtagaaaaagactat
aaaagtaaaaatgttaggcaaagtaaataa
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integrated database retrieval system
