Chelonia mydas (green sea turtle): 102942979
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Entry
102942979 CDS
T02989
Symbol
SMC4
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X3
KO
K06675
structural maintenance of chromosome 4
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmy03036
]
102942979 (SMC4)
Chromosome and associated proteins [BR:
cmy03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
102942979 (SMC4)
Condensin II
102942979 (SMC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_23
AAA_29
Vac_Fusion
ABC_tran
Motif
Other DBs
NCBI-GeneID:
102942979
NCBI-ProteinID:
XP_007063145
UniProt:
M7B6H5
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Position
9:complement(21665521..21767421)
Genome browser
AA seq
1293 aa
AA seq
DB search
MPSKRTKTSTAACQKGKEPLEESTGDMEVEKEADTCISEASQQPASNGVLDDRSLEEILS
SISPPPPPAMTNEAGAPRLMITHIVNQNFKSYAGEQILGPFHKRFSCIIGPNGSGKSNVI
DSMLFVFGYRAQKIRSKKLSVLIHNSDEHKNIQSCTVEVHFQKIVDKEGDDYEVIPNSNF
CVSRTAYRDNSSVYHISGKKKTFKDVGILLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQ
NEHDEGMLEYLEDLIGSGRLKDPIQVLCRRVEMLNEQRGEKLNRVKMVEKEKDALEGERN
KAVEFLSLENKMFKEKNRICQYYIYDLQNRITDMETQKKKIHEDTKDINTKNSKLADEMK
VKNKALKDVEKKLNKITKFIEENKEKFTQLDLHDVTVREKLKHAKSKAKKLLKQLEKDKE
KVQQFKSVPGNSETTISEASSKKEVLEKEKEREEEILKRVMDSLKQETQGLQKEKEGKEK
ELMEFSKTVNGARSKMDVAQSELDIYLSHHNTAVSQLNKAKEALKTASGTLKERIAGIKE
LDTKLPQAEQELKQKENELEKLGREEMDTKNLVRKLRQKVEEAKSSLAINRSRGKVLDGL
LQQKKSGKIPGIYGRLGDLGAIDEKYDIAISSSCGALDYIVVDTIDTAQECVNFLKSQGI
GVATFIALDKMRVWEKSMNKIQTPENTPRLFDMVKVKDEKIRHAFYFALRDTLVANNLDQ
AIRVAFQKDTRWRVVTLQGQIVEQSGTMSGGGRNVMKGRMGSSVVVEISEEEANKMESQL
QKDSIKAMQYQEEKVQLEEAIVKLRLCVQEMRNTLEKYTASIQSLSEQEVHLKVQVKELE
ANVIAAAPDKNKQKQLEKTLNTFKKDYESVAEKASKVESEVKRLHNLIIEINNHKLKAQQ
DKLDKINKEIDECASAITKAQVAIKTADRNLKKSEESVLRTEKEIGDNEKEMKDLTEELT
TLEEKATEVMNNCKQAEESLPEVQEEHRNLLQEMKAIQEDEHALQKEALNIRLKIEQIDS
HIGEHQSKIKYWQREISKISLHPTEDKLVEELSVLNQEELEAIKDPDILTNQIALLEAQC
HEMKPNLGAIAEYNKKEELYLKRVAELDEITNERDNFRQAYEDLRKQRLNEFMAGFNVIT
NKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLAL
VFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEIADRLI
GIYKTHNTTKSVATNPKVIASKGLAELGSVGCC
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgccaagcaagaggaccaaaacctccactgcagcctgtcaaaaaggcaaagagccctta
gaggaatccaccggtgatatggaagtggaaaaagaagccgacacgtgcatcagtgaagca
tctcagcaaccagcctcaaatggggtacttgatgatcgaagtttagaagagattttgagt
agcatctctcctcccccacctccagcaatgaccaatgaagctggagctcctcgcctcatg
ataactcatattgtaaaccagaacttcaaatcctacgcaggggagcaaattctgggacct
tttcataagcgtttttcctgtattattggaccaaatggcagtggaaaatccaatgtcatt
gattcaatgctttttgtatttgggtatcgggcacaaaaaatcagatccaaaaagctttct
gtgctgatccataattctgatgaacacaagaacatccagagttgtactgtggaagttcac
tttcaaaagatcgttgacaaggaaggggatgattatgaagtcattcccaacagcaatttc
tgtgtatctagaactgcctacagagataattcttctgtctaccacatcagtgggaagaag
aaaacattcaaagatgttggtattctgcttcgaagccatggaattgacctggaccataat
agatttttaattttacagggggaagttgaacagattgcaatgatgaaaccaaaaggccag
aatgaacatgatgaaggtatgcttgaatacttagaagacctaataggatcaggacggtta
aaagatcccattcaagttctgtgtcgcagagttgagatgttaaatgagcagagaggagag
aagttaaacagggttaaaatggtggagaaagaaaaagatgctttagaaggagagagaaac
aaagccgttgaatttctttctttggaaaacaaaatgttcaaggaaaagaatcgtatttgc
caatactacatttatgacctgcagaatcggataactgacatggaaacccaaaagaaaaaa
attcatgaagacactaaagatattaacacaaagaatagtaaacttgctgatgaaatgaaa
gttaagaataaagctttgaaagatgtagaaaaaaaactcaataaaattacaaagttcata
gaggaaaacaaagagaaatttactcagctggatttgcacgatgttacagtgagggaaaaa
ctaaaacatgccaaaagcaaagctaaaaaacttctgaagcagcttgaaaaggataaagaa
aaggttcaacaatttaaaagtgtacctggcaacagtgagacaactatcagtgaagcatcg
tctaagaaagaagttcttgaaaaggaaaaagagcgagaagaagaaatattaaaacgagtt
atggatagccttaaacaggaaacacaaggacttcagaaagagaaagagggcaaagaaaaa
gaacttatggagttcagcaaaacagtgaatggagcacgttctaagatggatgtagcccaa
tcggaacttgatatctacctcagtcaccataatacagcggtatctcagttaaataaagca
aaagaggctctaaagacagcttcaggaacccttaaggaaaggatagctggtatcaaagag
ctagatacaaaactacctcaagctgaacaggaactaaagcagaaagagaatgagcttgag
aaacttggaagagaggaaatggacactaagaaccttgttcgaaagctacgtcagaaggta
gaagaagcaaaaagttctttggcaataaatcgcagtcgaggaaaggttcttgatggtcta
cttcagcagaagaaatctggaaaaattcctggaatatatggaagactgggagacttggga
gctattgatgaaaagtatgacattgctatctcgtcatcttgcggtgccttagactacatt
gttgtagatacaattgatacagctcaggaatgtgtgaatttcttgaagagtcaaggaatt
ggagttgccacatttatagccttggacaaaatgagagtatgggaaaaaagtatgaataaa
attcagactccagaaaacactcctcgtctctttgacatggtgaaagtaaaagatgagaag
attcgccatgccttttattttgcattacgtgatactctagtagccaataacttggatcag
gctatcagagtagcattccaaaaggacacaagatggagagttgtaactttgcaaggacag
atcgtagaacagtcaggaacaatgagtggaggtggacgtaacgtaatgaagggtagaatg
ggatcctccgttgtggttgaaatttcagaagaagaggccaataaaatggaatctcagctg
caaaaggattccataaaagcaatgcagtatcaagaagagaaagtgcaacttgaagaagcc
atagtaaaattgcgtctgtgtgtccaggaaatgagaaacactttagaaaagtatactgcg
agtatccagagtttatcagaacaagaagttcacttgaaagtccaggttaaagaacttgag
gctaatgtaattgctgctgctcctgacaagaacaaacagaaacagctagaaaaaaccctt
aatactttcaaaaaagattatgagagtgttgctgaaaaggctagtaaagtggaaagtgaa
gttaaaagattacataatctcataattgagatcaataatcataaacttaaagctcagcaa
gacaaacttgataagataaataaggaaatagatgaatgtgcttctgctattactaaagcc
caggtggcaatcaagactgcagacagaaatctgaaaaaatcagaagaatctgttcttcgc
actgagaaggaaattggagataatgaaaaggaaatgaaagatctaacagaagagttaaca
acattggaagagaaagctacagaagttatgaataactgcaaacaagctgaagagtcatta
ccagaggttcaggaggagcatcgcaatttacttcaagagatgaaagcaattcaagaagat
gaacatgctcttcaaaaagaggctcttaatattagacttaaaattgaacaaatagacagt
catattggtgagcatcaatcaaagattaaatattggcaaagagagatatcaaaaatatca
ctgcatcccacagaagataaactagttgaagagctttcagtgctaaatcaagaggaactt
gaagcaattaaagatccagacattctaactaatcaaatagctcttttagaagcccagtgt
catgaaatgaaaccaaaccttggtgccattgcagaatataataaaaaggaagaactgtat
ttgaagcgtgtggcagagttggatgaaattaccaatgagagagacaactttagacaggct
tatgaagaccttagaaaacaaaggcttaatgagtttatggcaggatttaatgtaataacc
aataaactaaaggaaaattaccaaatgcttaccttgggaggagatgctgaattagagctt
gtagacagtctggatcctttctctgaaggaatcatgttcagtgtacggccaccaaagaaa
agctggaagaagatatttaatctatcaggaggagagaagactcttagttcactagcgttg
gtttttgcacttcatcattataagccaactcccctttacttcatggatgagattgatgca
gcccttgactttaaaaatgtatcaattgtagcattttatatatatgagcaaacaaaaaat
gcacagtttatcatcatctctctgcgaaataacatgtttgaaattgcagatagattaatt
ggaatttataagactcacaatacaacaaaaagtgttgcaacaaacccaaaagttattgct
tctaaaggacttgctgaacttggttctgtcggatgctgctga
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