Cryptococcus deneoformans B-3501A: CNBC1720 Help Entry CNBC1720          CDS       T01040                                  Name (RefSeq) hypothetical protein   KO K12604   CCR4-NOT transcription complex subunit 1 Organism cnb  Cryptococcus deneoformans B-3501A Pathway cnb03018   RNA degradation Brite KEGG Orthology (KO) [BR:cnb00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     CNBC1720  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cnb03019]     CNBC1720 Messenger RNA biogenesis [BR:cnb03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      CNBC1720   mRNA degradation factors    3'-5' decay     Ccr4-NOT complex      CNBC1720 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Not1 CNOT1_CAF1_bind DUF3819 CNOT1_TTP_bind ARM_Cnot1 CNOT1_HEAT NOT1_connector Motif Other DBs NCBI-GeneID:  4934837 NCBI-ProteinID:  XP_776681 LinkDB All DBs Position 3:477407..484559 Genome browser AA seq 2265 aa AA seqDB search MSIPPPGLGGGVSRTGPPPGFGGGAAHSPVSDASAATMASNAGVAGSVGGGAGRRDGQGG TAVIVRAQIVFLLTTFTEDSFEKASAEIRTLASTNGPEMYHHFLRRAVVVANPIIQTLIQ HSNQYKDDPAAPPPQIPTTGQAALVWRLLVTEAARAARDVQLAPHFSFIMLSSSPSTPLP LPSLRLFNLPPALLFSLSAYTLASPHVFPQNHASYPVFHAILAQTFQPTMELLRSPGVPF WMMNIPGREPFTDDLTLQEARTLILALFPRAQSPTSGTASRPATPTNPTSPHSSPLNSLQ RATLLTSLTVKFSSPAIILQTLSALSPGGPPRSPGSIPLEDILFELGESLTQDEGTVEAV VQRWWVSWLFEGSPEDVRRRVTEEACHVVHGLCEGLPLGRVVDLHGVIKGMSAIDAISWP DVVKSFDTPMTIAAYPSSIPLLVSLICLPSQAPVPPMAGLLPAHLEAPMWENISSLLSVL THLTSLAPDAMPIFTMPSAPPPSVYSRIVDPPPSEQVWSKAARQQARDLQGAGLWNTLGL IQVLVHACALAEMDHNSDREREERADIGRRATEILEKAAKLAPELVLIALEKLPKPLPSP VVVQQTRLLAMYLSTKPSDITSSALVFHQMWEINPENLLSVLLEFYGEDENNLGRIVEIG SELKDNLHFVLDVAALASNRELLNLERWLADGIEVKGEEFLEAIFDFVEHKIRLEFEHQH QPENAPPLLFTLGPTVYSIFIRVVRNAPNLAREDIARFKNLRTDILILHPRLLNLRPHSK QEQGFSEAKFAKDVVDKVDKIYQRMYGGQLKLDDVVEELKAFQKSDDSKEQDIFAHALHS LFDEYKFVKSYPPKELTMTGLLFGAIIDYRLVKDTPAFVATRYVLDACKTSPHEPLYQFG ITALSVLRNSLVDFPGLCRSLLEIPALHESHPVLINDIQQALIEREELDLQGGVKLAFPA LKLPVLIEEGDDEFKEPETGKKDAIMFHVNQIAPTNYEDKAKALLELFEDQYSRWFAHYF IDVRVSLEQNRHEIYLQLLQKLGSPLLDRHILWETYRKARELLNSEATINSASERAVLKT VAMWLGRITLAQNKPIRMKELSVKDLLIQGYDTKRLIVAIPFVCNLLASCRDSAVFHPPN PWLVAILRLLSEFYHFGELRLNMKFEIEVLFSKLGIELDSFEPSNLLRMHVPPPPAQPEI PNRLDLELQRATSELMNGSQRLGDLPGNEAYARIQQLQTEQAVQAAQDALARRVDELIAQ LPEYLVFNQDYPIFTAPTLKRIVHHSIDRAIREIITPVIERSVTIAGISSRDLIQKDFGT EPDAIKMRQAAHMMVQNLAGSLALVTCKEPLRSSMIANVKSMLEQNGYTDETMPDAMIAG VVNQNLDVACAVLKKAAMEKAAKDIDVNLAPQYAARKAHQNSRSTAPFWDSASFGVAISH TALPDPLKLRPGGLTPQQFRVYEDFGEPTRMLSSHPAANGDYLSASYQNLTLNDGLVPAE IKTGPSPRHGFVQDVVEAPEIVASPRAIPPQTSIDKFHEVAAEIQKIVSQTHVPSISALP ADHELRDLIRGIVIIANQSVHRENTTLAIAQKVVQLLYRSTVQLGREVYVYLLQQLCDLS AKVDKEVKQWLIYAEDVRKLNVPVTVTLLRAQSIGVQELDVALSHIIIRSYPSEILDFVT QLIRECSVSDIAFLPRQAFSHSLASLLKAQEDGHATAQVDSLLEELRGPREPQSSIEGDH SKTVIDSKLQERLAHYFLEWVRVCSSSKDPEVPFVPYITFLQKEGILSGEDVSSAFYRTA INTAVDLDTAKLTPDGSSRFYGVDALAKLILFIVKNYGDKSGASSVGRAVYYYNKIITIM SYSLVQRQLAMGDAFNQRPWARFFTSMLSELSTIEYDLPETYIGCLKHLANNLGITQPTY APRFAFGWVSVISHRLFMPKLLSTQRDEGWPEFHRCVMWLLRFLAPFLQSDDMTPSSRSI FKATIRLLMLLLHDFPEFLVEFYHTLSTVIPPHCTQMRNIVLSAFPHSEAPLPDYYKRLD QLVAEMQRFPTVRSDYIGALADGNVKAAVDQYVRTGVPTLPSIVAELKNRIAVKSLGPQG STAVTWNHTLMHASVFYLGTTAVARTFQQTGVASFDPKTPEVAVLAGLAHAFDGEGQYYM LNVVADQLRYPSAHTLFFIHFMLFLFGTSVQPELSSTIPERIARILLERTIVKRPHPWGL LVTFIELLDNEAYGFWKQPFVRAQDEVFRLFGQVRQSVAARRELQ NT seq 6798 nt NT seq  +upstreamnt  +downstreamnt atgtcaatccctcctcccggcctgggaggcggggtcagcagaacaggaccgcctccggga tttggcggcggtgcggcccattctccagttagcgatgcgagtgcggccaccatggcgagc aatgccggcgttgcgggaagtgttggcgggggtgccggtcgaagagacggtcagggcgga acagcagtgatcgttagagcacagattgtattcttgttaacgacttttacggaagatagc tttgaaaaggcctcagctgagatcaggacgcttgcgtctaccaatgggccggaaatgtac caccactttttaaggcgagcggtcgtggtcgccaacccaattatccaaactctaatccag cattcgaatcaatacaaggatgaccctgccgcgcctcctcctcagatccctactacgggt caagctgcgcttgtatggagattgctcgttactgaagcagctagggcagctagggatgtg cagctcgcgccccatttctccttcatcatgctttcctcctccccatcaactcctcttcct ttgccctctcttcgattgttcaacctccctcctgcgctgctcttctctctctcagcatac acacttgcatcacctcacgttttcccgcaaaaccacgcgtcttatcctgttttccatgcc atcctcgcccagaccttccagcctactatggagcttctacgatcgccaggtgttccattc tggatgatgaacatccctggaagagagccctttaccgacgatttgactttgcaggaagcc agaactttgatcctcgcgctcttcccgagggcccagagccctaccagcggcaccgcttct cgacctgctacacctaccaacccgacttcgccacattcttctcctctcaactctcttcaa cgtgcgaccctcctcacttctctcaccgtcaagttttcgtctcccgccatcatccttcaa actttatcagcgttatccccaggtggaccgcctcggtcgcctggcagcattccccttgaa gacatcttattcgagctgggtgagagtcttacccaagatgagggcactgttgaggctgtt gtgcagagatggtgggtctcttggttgtttgagggctccccagaagatgtcaggcgaaga gtcactgaagaagcgtgtcacgttgttcatggtctgtgtgagggattgccactggggcgt gtcgtagatctgcacggcgtgatcaaaggaatgtcggcgatcgatgctatctcctggcct gatgtggttaagtcatttgacactccgatgaccattgcggcatatccttcctctattccc ctccttgtttccctcatatgtcttccatcacaggcgcccgttccacccatggctggtctt ttgccagctcacctagaagcacccatgtgggaaaacatttcttcacttctctctgtgttg acgcaccttacgagccttgcgcccgacgcgatgcccatcttcactatgccatccgctcct ccaccttcagtctactctcgtattgtcgatcctccgccttccgagcaagtgtggagcaag gctgctcgtcagcaggcgagagatttgcagggagccgggttgtggaatactttgggtttg atccaagtattggtgcatgcgtgtgctttggcagagatggaccataattcagacagagaa agggaagagagggcggatattggcaggagagctacagagattttggagaaggcagccaaa ttggcgccagagttggttttgattgcgctagagaagcttccaaaacctcttccctccccc gttgtcgttcaacagactcgtcttttggcgatgtacttgtcaactaaacctagcgatatc acgtcatctgccctggtattccatcagatgtgggaaataaaccctgaaaatcttttgtcg gtcttgctagagttctatggggaagatgaaaacaatttgggaagaattgtggagatcggt tcagagttgaaggataatcttcactttgtcctcgatgtggccgctttggcatctaacaga gagttgctcaacttggagcgatggttggcggatgggattgaggttaagggagaagagttc ctcgaggctatctttgacttcgttgaacataagatccgtcttgagtttgagcatcagcat caacccgaaaacgcgccccctctattgttcactctcggtcccactgtatattctatcttc atccgtgtggttcgcaatgctcctaacctcgctcgtgaggacattgctcgtttcaaaaac cttcgaacggatatactcatccttcaccctcgtcttctcaacctccgaccgcatagcaag caagagcaaggtttctctgaagccaaattcgcgaaggatgttgttgataaggtggacaaa atctatcaacgaatgtatggtggacagctcaagttggatgacgtggtggaagagctgaaa gctttccaaaagtcggatgacagcaaggagcaagacatttttgcgcacgcacttcactcg ctctttgacgagtacaagtttgtcaagtcgtatcctcccaaggagttgaccatgactggt ctccttttcggtgccatcattgactatcgacttgtcaaggacactccggcgtttgttgcg acacgatacgtcttggatgcttgcaagacttctccccatgaacccttgtaccaatttggt atcaccgctttgagcgtgctccgtaactctcttgttgactttcccggtctctgtcgatct cttttagagattcctgctcttcatgagtctcaccctgttctaatcaatgacattcagcaa gcgttgatcgagagggaagagttggaccttcaaggaggcgtcaaattggcgtttcctgct ctcaaattgcctgtgcttattgaagagggagatgacgagtttaaagagccagagactggg aagaaagacgccatcatgttccacgtcaaccagatcgctcctaccaattacgaggataag gctaaagctttgctcgagctatttgaagaccagtattctcgttggttcgcgcactacttt atcgacgtccgagtcagtcttgagcagaataggcatgagatctacttgcagttgcttcaa aagctcggctcacctcttctcgaccgacacatcctctgggagacgtacaggaaagcgaga gagttgctcaactcggaggcaacgattaactctgcttcagaacgagcggttctcaaaacg gtggccatgtggttgggccgtatcactcttgctcagaacaagccaatcaggatgaaagag ctttccgtaaaggatctcttaatccaaggttacgacaccaaacgactcattgttgccatt ccctttgtctgtaacttgcttgcttcttgcagagattcagctgtcttccacccgcccaac ccttggttggttgctattcttagacttctttccgagttttaccactttggtgagcttaga ctcaacatgaagttcgaaatcgaagttcttttcagcaagctcggtatcgaacttgactcc ttcgagccatccaacctccttcgcatgcacgtcccaccaccccctgctcagcccgagatc cccaaccgactcgacctcgagcttcaacgtgccacaagcgaacttatgaatggttctcag cgacttggagacttgcctggcaacgaggcgtatgctcgcatccagcagttgcagactgag caagctgtacaagccgctcaggatgcgttggcgcgtcgcgtcgatgagcttattgctcaa cttcccgagtacctcgtcttcaaccaagattaccccatctttaccgctccaactctcaag cgtatcgtgcaccactcaatcgacagggccattcgtgaaatcattactcctgttatcgag cgttctgtcaccattgctggtatctcttctcgcgatttaattcaaaaagattttggtacc gagccggatgccattaagatgcgccaggcggctcacatgatggtgcagaaccttgccggt agcttggctttagtgacgtgcaaagagccgttgcgttctagcatgattgccaatgtcaag tccatgctcgaacagaacggttacacggatgagaccatgccggatgcgatgattgcgggt gtagtaaatcagaatttggatgtggcatgcgcggtgttaaagaaagccgccatggaaaaa gcagccaaggatattgatgtcaatcttgcacctcaatatgccgcgcgaaaggcccaccag aattcgagatctactgctcctttctgggacagtgcctctttcggtgttgccatctctcac actgctcttcccgaccctctcaaacttcgtcctggtggtcttacccctcagcagttcaga gtgtatgaagactttggcgagcctacgaggatgctgtcatctcatcccgctgccaacggc gattatctgtccgctagctatcaaaaccttactctcaacgacggactcgttcccgccgaa atcaagactggcccttcgcctcgtcacggctttgttcaagacgttgttgaggctcccgaa attgttgcgtcgccccgtgctatcccgcctcagactagcattgataagttccacgaggtt gcggctgagatccagaagatcgtctcccaaacccatgtacccagcatttcggcccttcct gctgaccatgagcttcgagatcttattcgaggcatcgttattattgcgaaccagtctgtg cacagggagaacacaactttggcgattgcccaaaaagttgtgcagctattgtacaggtcc acggtacagttgggccgggaggtgtatgtgtacttgttgcagcagttgtgcgatttgtcg gcgaaggtggacaaggaagtgaagcagtggctgatctatgcggaggatgtgaggaaactg aatgtccctgttactgtaactcttcttcgcgctcagtccatcggcgtgcaagagcttgac gttgccctttcccacatcatcatccggtcctacccctccgaaatcctcgacttcgtcact caactcatccgtgaatgctcggtgtctgatatcgcattccttcctcgacaggctttctct catagtctagcttcgcttcttaaggctcaggaagatggccatgctactgctcaagttgac tcattgctcgaagagcttcgtggcccacgagagcctcagagtagcatcgagggtgatcat tccaagactgtcattgacagcaagcttcaggagagattagctcactacttcttggagtgg gttcgagtctgcagctctagcaaggatcccgaagttcctttcgtgccctacatcactttc ttgcaaaaggagggtatcctcagcggtgaggatgtgtcatctgcattttaccgcactgct atcaataccgccgtcgatctcgacactgccaagcttacccccgatggctcatcaagattt tacggcgtagatgctttggccaaactcattctgttcatcgttaaaaactacggtgacaag agcggagccagcagtgttggtagagccgtctactattacaacaagatcattacgatcatg tcgtactctctcgtgcaaaggcaacttgccatgggtgatgctttcaaccagcgaccttgg gccaggttttttacaagtatgttgagcgagctgtctactattgagtatgaccttcctgaa acctatatcggctgcttgaagcaccttgccaacaacctcggcattactcagcccacttac gctccccgtttcgcattcggctgggtctcagttatctcccaccgtcttttcatgcctaaa ctcctctccactcaaagggacgaagggtggccggagttccaccgatgcgtcatgtggctt cttcgcttccttgcgcccttccttcagtcagatgacatgactccctcgtcaagatcaatc ttcaaagctactatccgacttctcatgcttcttttgcatgacttccccgagttcctcgtt gagttctaccatactctctccaccgtcatccctccccactgcactcaaatgcgaaacatt gtcctttctgcgttccctcattccgaggctcctctccccgattactacaagcggcttgat cagcttgttgcggagatgcagcgattccccaccgttcgctcagactacattggcgcattg gccgacggtaacgtcaaagccgccgtcgaccagtatgtccgaactggcgtccctactctt ccttcaatcgtggcggagctcaagaacaggatcgcggtgaagtctttgggtcctcaaggc agcactgctgtcacgtggaaccacacattgatgcacgcttcagtattctatcttggtacc actgcggttgctaggaccttccagcaaacgggcgttgcgagctttgacccgaagactcct gaggtggccgtgttggctggtttagcacatgcgtttgacggtgaaggccagtactatatg ctcaatgtggttgctgatcagcttcgatacccatccgctcatactcttttcttcatccac ttcatgctcttccttttcggtaccagtgtgcaacccgagctttcatctaccatccccgag cgtatcgcccgtatccttctcgaacgaaccattgtcaaacgccctcatccttggggtcta cttgtcactttcatcgagttgctcgacaacgaggcatatgggttctggaaacagccgttt gtcagggcgcaggatgaggtgttcagactcttcggccaggtgcgacagtctgtcgcggcg cgcagggaattgcagtaa

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