KEGG   Cryptococcus deneoformans B-3501A: CNBH2490
Entry
CNBH2490          CDS       T01040                                 
Name
(RefSeq) hypothetical protein
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
cnb  Cryptococcus deneoformans B-3501A
Pathway
cnb03020  RNA polymerase
cnb03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cnb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CNBH2490
  09124 Replication and repair
   03420 Nucleotide excision repair
    CNBH2490
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cnb03021]
    CNBH2490
   03400 DNA repair and recombination proteins [BR:cnb03400]
    CNBH2490
Transcription machinery [BR:cnb03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     CNBH2490
  RNA polymerase III system
   RNA polymerase III
     CNBH2490
  RNA polymerase I system
   RNA polymerase I
     CNBH2490
DNA repair and recombination proteins [BR:cnb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CNBH2490
SSDB
Motif
Pfam: RNA_pol_Rpb8
Other DBs
NCBI-GeneID: 4937772
NCBI-ProteinID: XP_773797
LinkDB
Position
8:702742..703455
AA seq 157 aa
MAESSNIIFDDRFTVDTVDKDGKKFDRVSRITATSHSLSMSLTLDIANELYPLEQSETFT
LTLARSLVPSELETLDSRADGDEGEEGSEVRRVKRELWRSHEQGLAEDYDYVMYGKVGKG
GSTAYFSFGGLLMALRGSYRHLAGVVVGENVYLLMRK
NT seq 474 nt   +upstreamnt  +downstreamnt
atggccgaatcatccaatatcatctttgacgacaggttcaccgtcgatactgtagacaag
gacggcaagaaatttgaccgagtgtcccggataaccgcgacgtcacattcgctttccatg
tccctcacgctcgacattgccaacgaactctacccactcgaacagtctgaaacgtttacg
ctcacactcgcgcggtcgctggtcccgtcggagctggaaacgttggatagtcgtgcggat
ggggacgaaggcgaggaggggagcgaagtgcggagggtgaagcgagagttgtggaggagt
catgagcaagggttggcggaagattatgattatgtcatgtatggcaaggtgggtaaaggc
ggtagcacggcatacttttctttcggtggactgctcatggctctccgtggatcgtatcga
catcttgcgggggttgttgttggagaaaacgtgtatttgctcatgcgcaagtaa

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