Cupriavidus necator N-1: CNE_1c34430
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Entry
CNE_1c34430 CDS
T01564
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cnc
Cupriavidus necator N-1
Pathway
cnc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cnc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CNE_1c34430 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cnc03021
]
CNE_1c34430 (rpoB)
03400 DNA repair and recombination proteins [BR:
cnc03400
]
CNE_1c34430 (rpoB)
Enzymes [BR:
cnc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CNE_1c34430 (rpoB)
Transcription machinery [BR:
cnc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CNE_1c34430 (rpoB)
DNA repair and recombination proteins [BR:
cnc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CNE_1c34430 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
AEI78746
UniProt:
G0EYV0
LinkDB
All DBs
Position
1:complement(3584984..3589090)
Genome browser
AA seq
1368 aa
AA seq
DB search
MAYSFTEKKRIRKSFAKRATVHQVPFLLATQIESYTQFLQAETPTARRKTEGLQAAFNAI
FPISSHNGLARMEFVSYHLSNPPFDVKECQQRGLTFHSALRAKVRLIINDRENPGKVKEV
KEQEVYMGEIPLMTSTGSFVINGTERVIVSQLHRSPGVFFEHDKGKTHSSGKLLFSARII
PYRGSWLDFEFDPKDILYFRVDRRRKMPVTILLKSIGLTPEQILAHFFVFDNFTLQAEGA
QLEFVPERLRGEVARFDIADKNGRVVVEKDKRINAKHIRDLDSAGTKLISVPEDYLLGRV
LAKNIIDPDTGEVIANANDELTETLLENLREAGVKQIQTLYTNDLDQGPYMSQTLRVDET
ADQTAARIAIYRMMRPGEPPTEEAVEALFQRLFYSEESYDLSRVGRMKVNSRLGRPTGEG
AMVLQDEDILETIKILVNLRNGKGEVDDIDHLGNRRVRCVGELAENQFRAGLSRVERAVK
ERLGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEITHKRRVSALGPG
GLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLALYARLNEYGFLETPYRKVVD
SKLTDQVDYLSAIEEGKYVVAQANATVDAEGNLTDELVSAREGSERETRMVTPDRVQYID
VAPSQIVSAAASLVPFLEHDDANRALMGANMQRQAVPCLRPDKPLVGTGIERTVAVDSGT
AVQAMRGGVVDYVDAMRIVIRVNDDEAVAGEVGVDIYNLIKYTRSNQNTNINQRPMVKVG
DIVARNDVIADGASTDLGELALGQNMLVAFMPWNGYNFEDSILISERVVAEDRYTSIHIE
ELSVVARDTKLGPEEITRDISNLAEAQLARLDESGITYIGAEVEAGDVLVGKVTPKGETQ
LTPEEKLLRAIFGEKASDVKDTSLRVPSGMSGIVIDVQVFTREGVTRDKRAQSIIDDELK
RYRLDLNDQLRIVEGDAFQRLERLLIDKTVNGGPKKLAKGAKITKEYLADIDRYHWFDIR
PADEELAAQLEAVKEAIEQKRHEFDLAFEEKRKKLTQGDELPPGVIKMVKVYLAVKRRLQ
PGDKMAGRHGNKGVVSKITPIEDMPYMADGTPADIVLNPLGVPSRMNVGQILETHLGWAA
RGLGERIGNMLKAQAKAAEVRKLLTQIYNESGKVEDLDSLSDSEVLELAENLKKGVPFAT
PVFDGAHEDEIRRMLDLAYPEEIAKEKGLTASKQQVTLFDGRTGEAFERPVTLGVMHMLK
LHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYVLQEMLTVK
SDDVNGRTKVYENIVKGEHSIDAGMPESFNVLVKEIRSLGIDIDLDRY
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacagcttcaccgaaaagaagcgcattcgcaaaagttttgcgaagcgcgcgacg
gtacatcaggttccattcctgcttgccacccagattgaatcctacactcagttcttgcaa
gcggaaacgccgaccgcgcgtcgcaagaccgaaggcctccaggccgctttcaacgcaatc
ttcccgatctcctcgcataacgggcttgcccgtatggagttcgtctcgtatcacctgtcc
aacccgccgttcgacgtcaaggaatgtcaacagcgtggcctgaccttccactcggcgctg
cgcgccaaggttcgcctgatcatcaacgatcgcgagaatcctggcaaggtcaaggaagtg
aaggagcaggaagtctacatgggcgaaatcccgctgatgacttccacgggttcgttcgtc
atcaacggcaccgagcgtgtcatcgtctcgcagctgcaccgctcgccgggcgtgttcttc
gagcacgacaagggcaagacccacagctcgggcaagctgctgttctcggcacgtatcatc
ccctaccgcggttcgtggctggacttcgagttcgacccgaaggacatcctgtacttccgc
gtcgaccgccgccgcaagatgccggtgacgatcctgctgaagtcgatcggcctgaccccg
gaacagatcctcgcgcacttcttcgtgttcgacaacttcacgctgcaggccgaaggcgcg
cagctggagttcgtgcccgagcgcctgcgcggtgaagtcgcgcgcttcgacatcgccgac
aagaacggccgcgtggtggtcgagaaagacaagcggatcaacgccaagcacatccgcgac
ctggattcggccggcaccaagctgatcagcgtgccggaagactacctgctgggccgcgtg
ctggccaagaacatcatcgacccggataccggcgaggtgattgccaacgccaacgacgag
ctcaccgaaacgctgctggaaaacctgcgcgaagccggcgtcaagcagatccagaccctg
tacaccaacgacctggaccagggcccgtacatgtcgcagaccctgcgcgtggacgagacc
gccgaccagaccgctgcgcgtatcgcgatctaccgcatgatgcgcccgggcgagccgccg
accgaggaagccgtggaagcgctgttccagcgcctgttctacagcgaagagtcgtacgac
ctgtcgcgcgttggccgcatgaaggtcaacagccgcctgggccgccccaccggcgaaggc
gccatggtgttgcaggacgaggacatcctcgagactatcaagatcctggtcaacctgcgc
aacggcaagggcgaggtcgatgacatcgaccacctgggcaaccgtcgcgtgcgttgcgtc
ggcgaactggccgaaaaccagttccgcgccggcctgtcgcgcgtggagcgtgccgtcaag
gaacgtctgggccaggccgagaccgagaacctgatgccgcacgacctgatcaactcgaag
ccgatctcgtcggcgatccgcgagttcttcggttcgtcgcagctgtcgcagttcatggac
cagaccaacccgctgtccgagatcacgcacaagcgccgtgtctccgcactgggcccgggc
ggtctgacgcgcgagcgcgccggctttgaagtccgtgacgtgcacccgacccactatggc
cgcgtgtgcccgatcgaaacgccggaaggtccgaacattggtctgatcaactcgctggca
ctgtatgcccgcctgaacgaatacggcttcctggaaacgccgtaccgcaaggtggtcgac
agcaagctgaccgaccaggtcgactacctgtccgcgatcgaggaaggcaagtacgtggtg
gcgcaggccaacgcgaccgttgacgccgagggcaacctgaccgacgaactggtgtcggcg
cgtgaaggctccgagcgtgaaacccgcatggtcacgccggaccgcgtgcagtacatcgac
gtggcaccgtcgcagatcgtgtcggccgctgcctcgctggtgccgttcctggaacacgat
gacgcgaaccgtgcactgatgggcgccaacatgcagcgccaggccgtgccttgcctgcgt
ccggacaagccgctggtcggcaccggcatcgagcgtaccgttgcggtcgactcgggtacg
gccgtgcaggcgatgcgtggcggcgtggtcgactacgtcgacgcgatgcgtatcgtgatc
cgcgtgaacgacgacgaagccgttgccggtgaagtcggcgtggacatctacaacctgatc
aagtacacgcgctcgaaccagaacaccaacatcaaccagcgtccgatggtcaaggttggc
gatatcgttgcccgcaacgatgtgatcgccgacggcgcctcgaccgacctgggtgaactg
gccctgggccagaacatgctggtggcgttcatgccgtggaacggctacaacttcgaggat
tcgatcctgatctcggagcgtgtggtggccgaagaccgctatacctcgatccacatcgag
gaactgtcggtcgttgcccgcgacaccaagctgggaccggaagaaatcacgcgcgatatc
tcgaacctggccgaggcccagctggctcgcctggacgagtcgggcatcacctacatcggc
gctgaagtcgaagccggtgacgtgctggtgggcaaggtcacgccgaagggcgagacccag
ctgaccccggaagagaagctgctgcgcgcgatcttcggcgagaaggcttcggacgtgaag
gacacctcgctgcgcgtgccgtcgggcatgagcggcatcgtgatcgacgtccaggtcttc
acccgcgaaggcgtgacgcgcgacaagcgtgcccagtcgatcatcgacgacgaactgaag
cgctaccgcctggacctgaacgaccagctgcgtatcgtggaaggcgacgcgttccagcgt
ctggagcgcctgctcatcgacaagaccgtcaacggcggtccgaagaagctggccaagggt
gccaagatcaccaaggaatacctggcggacatcgacaggtaccactggttcgacatccgt
ccggccgacgaggaactggctgcccagctggaagccgtcaaggaagccatcgagcagaag
cgccacgagttcgacctggccttcgaagagaagcgcaagaagctcacgcagggcgacgaa
ctgccgccgggcgtgatcaagatggtcaaggtgtacctggccgtcaagcgccgcctgcag
cctggcgacaagatggcaggccgtcacggcaacaagggtgtcgtgtccaagatcactccg
atcgaagacatgccctacatggccgacggtacgcctgccgacatcgtgctgaatccgctg
ggcgtgccttcgcggatgaacgtgggtcagattctcgagacccacctgggctgggccgcg
cgcggtctgggcgagcgcatcggcaacatgctgaaggcgcaagccaaggcagccgaagtg
cgcaagctgctcacgcagatctacaacgagagcggcaaggtcgaagacctcgacagcctg
tcggattcggaagtcctggaactggccgagaacctgaagaagggcgtgccgttcgcgacg
ccggtgttcgatggtgcgcatgaggacgaaatccgccgcatgctggacctcgcctatccg
gaagagatcgcgaaggagaagggcctgacggcttccaagcagcaggtcacgctgttcgac
ggccgcaccggcgaggcgttcgagcgtccggtcacgctgggtgtgatgcacatgctgaag
ctgcaccacctggtcgatgacaagatgcacgcgcgttccaccggcccgtactcgctggtg
acgcagcagccgctgggtggtaaagcccagttcggtggccagcgtttcggtgagatggaa
gtttgggcactggaagcctacggcgcgtcgtacgtgctgcaggaaatgctgacggtcaag
tccgatgacgtgaacggccgtaccaaggtgtacgagaacatcgtcaagggcgagcactcg
atcgatgccggcatgccggaatcgttcaacgtgctggtgaaggaaatccgctcgctgggt
atcgacatcgacctcgatcgctactga
DBGET
integrated database retrieval system
