KEGG   Cryptococcus deneoformans JEC21: CND01700
Entry
CND01700          CDS       T00243                                 
Name
(RefSeq) translation repressor, putative
  KO
K12600  superkiller protein 3
Organism
cne  Cryptococcus deneoformans JEC21
Pathway
cne03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cne00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CND01700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cne03019]
    CND01700
Messenger RNA biogenesis [BR:cne03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     CND01700
SSDB
Motif
Pfam: TPR_1 TPR_2 TPR_8 TPR_19 TPR_16 TPR_12 TPR_17 TPR_CcmH_CycH TPR_14 TPR_11 TPR_9 ANAPC3 TPR_6 TPR_7 E_motif NatB_MDM20 HrpB1_HrpK ARM_TT21_C Sel1
Other DBs
NCBI-GeneID: 3257370
NCBI-ProteinID: XP_024512790
UniProt: Q5KIU7
LinkDB
Position
4:join(456760..456887,456934..456991,457045..457181,457229..457304,457356..457804,457854..458104,458153..458457,458503..458660,458709..459121,459184..461293,461351..461921)
AA seq 1551 aa
MATKNALKSIKAHLGEKNSESALYEATELLKSIGPDSPEADQVLVFRGLALTQLQRLDEA
EKSYLHAYKLNPNNPLASVGLRRLYHKNQSWEKLATFLEVQVQTTFEKQDDEKLAEVLKE
LLEVREQHGPEEKLYRTLDLLLPSSPVAGLLQSVTPPQGTYIPLAIPVYPSASDILPTLP
SPLPHPVHLAGSLSLALVSLIRSEIEIKQKIDARVNNERKRLGAGTEKDVRRKVDREILG
TEGMRLVDLWKEIAGHPQVEEEIRREVEIREFEFWRRLVAALPVENKIASKESAGKASQA
EMPANASNELVEPALFKAKQYVAPNRTEALSHVNALADGFVLLDISAKGAEEGWRWVLEG
KDEPTLFYDIDLLHKYSEAFPNSPMACFIEEYCRWFKRPLPETEEDSSKTEAYERDEKAE
GSVKHRKSHKGGRGALTKRQSRRAHLREIHVSEDVEKEEREELFSSMTKLVDQLPMSIFA
HRVMARIALEDEDWSSAISFAEKARKLLTGLEAERGITLSNVRADLDTVLGVALVPHYPP
KHHVRAARILETVLKIHPTNNEARFARAQIYETAGQWSDARHHFEKIVQDGGSEKERLDS
KEEVGWCLANEGKLEEGRDILEEVIEVRDTKTEKEKEAEARERGRTWWRLGRTEWMIGDE
ESKQHAEEWFMASVRAHPDFAASYTSLGVCYSSATPPDNERALKCFQRAFELDATETDAA
YRLANGYADEDEWARVRTIAVRVMEGEGGLEGVAGGDVLNAKGRFAPQNGWAWKALGSSE
MHYKKYAEAAAAYQIALRADDQDVSTWIMLGESYVKCGRHMAGLKTFDHALTLDPDNWRA
LYNIGQTQSQLGAFDKAIEAYQKVLEITQDEDVGVIAALAEANLSLGRQTGTGGFRERSR
GAFHRAIELAMKVLKSGKAHKAWGWKLIGDATYELSGQESNIEEAQDSFTVVQPVLIFLV
EDDTDRRSTTPGVGHAANLLQDVVSTTTSLRASIFAFAYRAHILKNEPRVIDPALYDYAS
ALHTLAGKLIESDERKQCLKTAISAVRAALDRNAGDERLWNALGVICATAGPQVAQHAFV
VSLELYSKDPVVWVNLGYLYLHLDDLDLANQCFLKAQIIDPDSARAWYGQGLLADRHGDK
EHAKALFSHSVTLSAQSLLEADLALAAATFAQFFRPNASVDSSLLHQPAFALKHYCHQRP
RDSTAAHLYALICERLGLVEEAALSLENAAAVLEEEFERVESGEIENLYSVALCNLGRVR
LSAGVYLESLDALNNCWELIASSSEPSAVSLKPQCKLLQGLAFYWLGQIDESLEAFQASL
DAATQNQDYDVKEKVAVLLSRTLWGLGGNDAKETAKSNLMECLARERPSLGVISTLAAIA
LVSSDADLTNAAVSELLTRPIAERVQDPSGQANLVLYLQAISEGREEDAYNTLQSASQAA
PASRSIRNRLVEALIKAGKSKEALDVLAVKNVKEGTAEVKAKEERLLGIGELMEGDAKGM
KGVVRSVMLAPWEDESWQALAWGKKVVEEAGLIETKDGAKDDAATKLDLTE
NT seq 4656 nt   +upstreamnt  +downstreamnt
atggctacgaagaatgccctcaagtctatcaaggctcacttaggagaaaagaactccgaa
tccgctctctatgaggccaccgaacttctcaagtccatcggcccagactcaccagaagct
gatcaggttctggtctttcgagggctcgccctcactcaacttcaaaggctggacgaagcg
gaaaagtcatatcttcatgcttataaattgaatcccaacaatcctctcgcatccgttggg
ctacggcggctgtaccacaaaaaccaaagttgggaaaagcttgcgactttcttagaggtg
caagtgcaaacgacgtttgagaaacaggatgacgaaaagcttgcagaggttcttaaagaa
ttattagaggtcagagagcaacatgggcctgaggaaaaactttatcggactcttgatctt
cttctcccttcatcgcctgtagcggggcttttgcagtcagtgacgccaccccaagggact
tacattcctctagccatccctgtctacccatcagcatctgacatcctgccgactcttcct
tcccctcttccccaccctgttcaccttgctggatctctttctctcgcattggtatccctg
atccgctcggaaattgagattaaacagaagatcgatgcacgggttaataatgagcgcaag
cgcctaggtgctggaacagagaaggatgtcaggaggaaagtcgacagagaaatactcgga
acagaaggcatgaggctggtcgatctctggaaagagattgcaggtcatccacaagtggaa
gaggagattcgaagagaggttgaaattcgggaattcgaattttggaggagactcgtcgct
gctcttcctgtcgaaaataaaatagcttccaaagagtctgctggtaaagcctcacaagct
gagatgccggccaacgcctccaacgaacttgttgagccggcgctcttcaaagccaaacaa
tatgtagctccgaatcgcacagaagctctctctcatgtcaatgcgctcgccgatggcttc
gtcctactcgatatctcggccaagggcgccgaggagggctggcgatgggtgttagagggc
aaagatgagcctactttgttctatgatattgatttgcttcacaagtattctgaagcgttt
cccaactctcctatggcatgctttatagaagaatactgccggtggttcaaacgtcctttg
ccggaaacggaggaagattcttcaaaaacagaagcatacgaaagagacgagaaagccgag
ggttctgtaaagcaccggaagagtcacaagggcgggcgaggtgctttaacaaagagacaa
tctcgtcgagcccatctgcgggaaatccatgtgtcagaggacgttgaaaaggaggaaaga
gaggagctgttctcgtcgatgactaaacttgtcgaccaacttccgatgtccatttttgcc
catagggtgatggcgagaatcgcgcttgaagatgaagattggtccagcgcgataagcttt
gctgagaaggcccgcaagcttcttaccggactggaagctgagagaggtatcactctttcc
aacgttcgcgcagacctcgatacagttctgggcgtagccctcgtcccgcattaccctccc
aaacaccatgtccgtgcagcgcgcatccttgagacagtgctcaaaatccatccgaccaat
aatgaggcccgttttgcccgtgcacaaatttacgaaactgccggccaatggtctgatgct
cgtcatcatttcgaaaaaattgtccaagatggcgggagcgaaaaggaaaggttggattca
aaggaagaagtcggctggtgtttggccaacgaaggaaagctcgaggaagggagagatata
ttggaggaggtcatagaagtcagagacaccaagacagaaaaagaaaaagaggcagaagca
agggagagggggaggacttggtggagattgggcaggactgagtggatgatcggagatgag
gaaagtaagcaacatgccgaagaatggtttatggcatctgtccgtgcacacccagacttt
gcggcgtcttacacttcccttggagtctgttactcatccgcaacccctcccgataacgag
cgtgccctcaaatgctttcaacgagctttcgagcttgacgccacagaaactgatgccgct
tatcgactggcaaatggatacgccgatgaagatgagtgggcaagggtgaggacgatcgcc
gtgcgtgtgatggaaggcgaagggggtctggagggtgtggcgggcggggacgtattgaac
gctaaaggaagatttgctccgcaaaatggttgggcttggaaagcactcggctcttccgag
atgcattataaaaaatatgctgaggccgccgccgcctatcagatcgctcttcgtgccgat
gatcaggatgtatccacgtggattatgttaggcgagagttacgtcaagtgcgggcgacac
atggcaggactcaagacatttgaccatgccctaaccctcgatcccgacaactggcgcgct
ctctacaatatcggtcaaactcaaagccagctcggcgctttcgacaaagccattgaagcc
tatcagaaagtcttggaaatcacccaggatgaggatgttggtgtaattgcggctttggcg
gaggcgaacctttctctcggacgacagaccggaacgggaggctttagagaaaggtcaaga
ggagcattccatcgagcgatcgagttggctatgaaggtgctcaagtcaggaaaggctcac
aaggcatggggatggaagcttattggcgacgctacctatgaattgagcggacaagaatca
aatattgaggaggcgcaggattcgtttacggttgtacaaccggtgctgattttccttgtt
gaagatgacaccgatcgtcggtcaacaacaccaggtgtcggccatgcagcaaatctcctt
caagatgttgtctccaccaccacttctctccgggcttcgatcttcgctttcgcgtatcgt
gcccatattctcaagaacgagccccgtgttatcgatccagcattgtatgactatgccagc
gccttgcatacattggctggcaaacttatcgaaagcgatgagaggaagcaatgtcttaag
accgctatcagcgctgtaagggcagctttggataggaacgcaggcgatgaaaggctttgg
aatgctttgggtgtgatttgtgcgactgctggcccacaagttgctcaacacgcttttgta
gtgtctctcgagctctacagcaaggatccagttgtttgggtcaacttgggatacttgtat
ctgcatttggatgatctcgatctcgccaatcaatgtttcctcaaggctcaaatcattgat
cccgattctgcgagggcttggtatggacaaggcctgttagctgaccgacatggtgataaa
gagcatgccaaggcactcttttcacactcagtgacactctcagcccaatcccttctagaa
gcggaccttgctcttgcagcggcgactttcgcccaattcttccgccccaacgcttctgtt
gattctagtcttcttcatcaacccgcgtttgccctcaagcattactgtcatcagcgcccg
cgcgattccactgctgctcatctctatgctctcatatgcgagcgattgggtcttgtcgag
gaagcagcgttgtcacttgaaaatgccgctgctgtgttggaagaggaatttgagcgagtt
gaatcgggggaaattgaaaacctttattctgttgccctttgcaacctcggtcgagttcgc
ctttctgctggcgtgtacttagaatctcttgatgcgctcaacaactgctgggagctcatt
gcgtcttcatctgaaccgagtgcagtttctctaaagccgcaatgcaagctcctgcaaggt
ttggcattctactggcttggacagattgatgaaagcctggaggcattccaagcaagttta
gacgcagcgacacagaatcaggactacgatgtcaaggagaaggtggcagtgctcctgagt
agaacgttgtgggggttgggagggaatgatgcgaaggagacagcaaaaagtaacctcatg
gaatgtttggctcgagaaagaccatctcttggagttatctctactctggcggccattgcg
ctcgtatcctccgacgcagatcttactaatgctgctgtctccgagctccttactcgacct
atcgcggagagagtacaagatccttctggacaggccaatctcgtgctctatctacaagct
atctctgagggtcgagaggaagacgcctacaatacattacagtccgcttctcaggccgca
ccagcatctcgaagcatacggaaccgccttgtagaagccctcatcaaggctggcaaatca
aaggaagcgcttgatgttctcgctgttaaaaatgttaaggaaggaactgctgaagtcaaa
gccaaggaggaaagattgcttggcataggagagttgatggaaggagatgcgaaggggatg
aaaggagtagtcaggagcgtaatgcttgcaccttgggaagatgagagctggcaggctttg
gcgtggggaaagaaagtggttgaagaggcgggcttgattgagaccaaagatggggcgaaa
gatgacgccgcgactaaattagatcttacagaatga

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