Cryptococcus deneoformans JEC21: CND02890
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Entry
CND02890 CDS
T00243
Name
(RefSeq) DNA supercoiling, putative
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
cne
Cryptococcus deneoformans JEC21
Pathway
cne03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CND02890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cne03400
]
CND02890
DNA repair and recombination proteins [BR:
cne03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
CND02890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Rad54_N
Helicase_C
HDA2-3
ResIII
Motif
Other DBs
NCBI-GeneID:
3256842
NCBI-ProteinID:
XP_570462
UniProt:
Q5KII1
LinkDB
All DBs
Position
4:complement(join(781918..782026,782081..782284,782343..782467,782519..782789,782840..783128,783178..783474,783530..784338,784400..784752))
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AA seq
818 aa
AA seq
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MLRRTIQRPSEPPLTSATSGGYGIVSTPFKVPKSSAPKRESALPARKRKAVSYKEEGSFD
GSGDYEDNNEGRASKKGKFAMGNKEYGSDGVLGDMAKWCNRKFPVFQPKDKSGVFTKSFS
IPVMYCPKTSEPIIHSLSHASLGARRHPTLIPRPLHNPMDDHAIVLFDPTIDDKPNPEDM
KAAEFHEEMKKKEELNKGPHRSLKAILGIVDEKKNKQVVKVPVVIDPRLSKVLRPHQIEG
VKFLYRCTTGLIADGAWGCIMADEMGLGKTLQCIALLWTLLKQSPVAGKPTCEKVIIACP
TSLVGNWANELVKWLGTGAVSPMVVDGKGGKAELIPAVRRWVQAHGRNVTLPVMIVSYET
LRTLQEELASCEIGLLLADEGHRLKNAETLTFQALTSLKVQRRVILTGTPIQNDLSEYFA
LLNFANPEYLGSKLDFKKNFESKILRGRDADATEKEKLESDAKLKELGGLVSKFIIRRTN
DLLSKYLPVKYEHVVFCRPSPLQASLYNLFVTSKDVQRLLRGKDSQPLKAIGLLRKLVNH
PDLLNLPEDLPGSEALLPDGYNGKGRDRTVNCQYSGKFVVLERMLDHINHHTNDKIVLIS
NATQTLDLMEKLCRSKRYGYLRLDGSMSVPKRSKIVAQFNQPESKEFVFLLSSKAGGCGI
NLIGANRLVLFDPDWNPASDQQALARVWRDGQKKECFVYRFQTTGTIEEKIFQRQCQKQN
LSACVVDEAEDTARHFTQGDLRQLFNFNPETLCDTHDTYKCKRCREGKQFVKAQALLYGD
ASTWNHYPNEELGKMHDDLLRAELGLPEVSYVFQYISH
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgcttcggagaacaattcaacgtcccagcgagccgccgctcacctcagccacttctggg
ggctacggtatcgtatccactcccttcaaggtacccaaatcttcagcacctaaacgcgaa
tcagcacttccagcgcgaaagcggaaagcggtctcgtataaagaagaaggatcctttgat
ggcagtggcgattatgaagacaataatgaaggaagggccagcaagaaaggcaaatttgct
atgggtaacaaggagtatggctccgatggcgtgttgggcgatatggccaaatggtgtaat
agaaaatttccggtgtttcaaccaaaagacaagtcaggggtatttacaaaaagcttctca
atcccagtcatgtattgccccaagacctcagaacccataatacactcgctttcccatgcc
tctcttggtgcccgcagacatcctactcttatccccaggcctctacacaatcctatggac
gaccatgctatcgttctgttcgatcccactattgatgataagccgaatccagaggatatg
aaggcagcagaatttcatgaagaaatgaagaagaaagaagaattgaacaaggggccgcat
agaagcttgaaggccatccttggtattgttgatgaaaagaagaataagcaggttgtcaag
gtgccagttgtcatagacccaaggctttcgaaagtcttgcgacctcaccaaatcgaaggt
gtgaaattcctataccggtgcacaaccggtctgattgcagatggagcatggggatgtatc
atggcagatgaaatgggtctcggaaaaactctgcaatgtatcgctctcctttggacactt
ctcaagcagtcgcccgttgccgggaagcctacgtgtgagaaagttattatcgcctgcccc
acgtcactcgttggtaattgggccaatgagctcgtcaaatggcttggaacaggagcggtc
agtcctatggtagtggacggcaaagggggaaaagctgagcttatccccgctgtgaggcgg
tgggtgcaagcacacggcaggaatgtcactttgcctgtgatgatcgtgtcgtatgagact
ttgcgaactctacaagaagagttggctagttgtgaaattgggctgcttcttgctgatgag
ggtcatcggctcaaaaacgcggagactcttaccttccaagctcttacctctctcaaagtc
cagcgtcgagtcattttaactggaacacccatacaaaacgacttatctgagtattttgct
ctattgaattttgccaacccagagtatcttggttcgaagcttgatttcaaaaagaacttt
gagtccaaaattctcagagggcgtgatgccgatgcaacggagaaagaaaaattggaaagt
gacgcgaaattaaaagagcttggtggactcgtgagcaagttcatcatcagacggacaaac
gacctgttatccaaatatctgcctgtcaaatacgagcatgtcgtattctgtcgcccgagt
ccccttcaagcatcgctctacaatcttttcgttacctccaaggacgtccaacgcctcctt
cgaggaaaagattctcaacctctcaaggccattggtcttctcagaaagctggttaatcac
ccggatcttctcaatctacccgaagaccttcctggcagcgaagccttgttaccagatggg
tataacgggaagggcagggacagaaccgtcaactgccagtattctgggaaatttgttgtt
cttgaaaggatgctagaccacataaaccaccacacaaatgacaaaatagtactcatcagc
aacgctacccaaactcttgacctgatggagaagctatgtcgcagtaagcggtatggctat
cttcggttagacggtagcatgtcggtccccaagagatcaaagattgtggcgcagttcaat
cagcccgaaagcaaggaatttgtctttttgcttagctccaaggcaggtggatgtggcatt
aacttaatcggcgccaacagattggtgctgtttgaccctgattggaaccctgccagtgac
cagcaggctttggctcgtgtctggcgtgatggccaaaagaaagaatgttttgtctatcga
tttcagacgacaggtactattgaagaaaaaatattccaacgacaatgtcaaaagcaaaat
ctctcagcgtgcgtggtagacgaagcagaagatacggcccgacatttcacgcagggtgac
ctacgacaactgttcaatttcaaccccgaaactttgtgtgatacgcacgatacatacaaa
tgcaaacgatgtcgagaaggcaaacaattcgtcaaggcccaagccctgctctatggcgat
gccagcacatggaatcattatcccaacgaggagctcgggaagatgcatgacgacctattg
agagcggaattgggtctcccagaggtgtcatacgtcttccagtacatttctcactga
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