Cryptococcus neoformans var. grubii H99: CNAG_00659
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Entry
CNAG_00659 CDS
T08175
Name
(RefSeq) TFIIH basal transcription factor complex TTD-A subunit
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
cng
Cryptococcus neoformans var. grubii H99
Pathway
cng03022
Basal transcription factors
cng03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CNAG_00659
09124 Replication and repair
03420 Nucleotide excision repair
CNAG_00659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cng03021
]
CNAG_00659
03400 DNA repair and recombination proteins [BR:
cng03400
]
CNAG_00659
Transcription machinery [BR:
cng03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CNAG_00659
DNA repair and recombination proteins [BR:
cng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CNAG_00659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb5
Motif
Other DBs
NCBI-GeneID:
23884441
NCBI-ProteinID:
XP_012046870
UniProt:
J9VFB7
LinkDB
All DBs
Position
1:1712601..1713641
Genome browser
AA seq
78 aa
AA seq
DB search
MSADSYNVKITSGVLVTCDSAAKQILLHLDSMRDGPSKFVIRDVDENRVMIKKEYVEMIK
DELQTELEKNTYIQDPDI
NT seq
237 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcagacagctacaacgtcaagatcacctcgggcgtcctcgtcacctgcgactcc
gccgcaaagcagatcttgttgcatttggattccatgcgggatggtcccagcaagtttgtc
attcgtgacgttgacgagaaccgtgtgatgatcaaaaaggaatacgtcgaaatgatcaaa
gacgagcttcaaaccgagttggagaaaaatacgtatattcaagaccctgacatatga
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