Cryptococcus neoformans var. grubii H99: CNAG_00694
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Entry
CNAG_00694 CDS
T08175
Name
(RefSeq) pre-mRNA-splicing factor CLF1
KO
K12869
crooked neck
Organism
cng
Cryptococcus neoformans var. grubii H99
Pathway
cng03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CNAG_00694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cng03041
]
CNAG_00694
03036 Chromosome and associated proteins [BR:
cng03036
]
CNAG_00694
Spliceosome [BR:
cng03041
]
Complex B
Other components
Prp19-related factors
CNAG_00694
Complex C
CNAG_00694
Chromosome and associated proteins [BR:
cng03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
CNAG_00694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
HAT
Suf
TPR_19
TPR_2
TPR_12
TPR_16
TPR_17
HAT_Syf1_M
TPR_CcmH_CycH
Mad3_BUB1_I
SNAP
U3_assoc_6
FAT
Motif
Other DBs
NCBI-GeneID:
23884476
NCBI-ProteinID:
XP_012046896
UniProt:
Q9HF03
LinkDB
All DBs
Position
1:1806777..1809680
Genome browser
AA seq
724 aa
AA seq
DB search
MAGRDPRDRAPRVRNRAPAAVQITAEQLLREAQERQEPTIQAPKQRVQDLEELSEFQARK
RTEFESRIRYSRDSILAWTKYAQWEASQNEYERSRSVFERALDVDPRSVDLWIKYTDMEL
KARNINHARNLFDRAITLLPRVDALWYKYVYLEELLLNVSGARQIFERWMQWEPNDKAWQ
SYIKLEERYNELDRASAIYERWIACRPIPKNWVAWAKFEEDRGQPDKAREVFQTALEFFG
DEEEQVEKAQSVFAAFARMETRLKEFERARVIYKFALARLPRSKSASLYAQYTKFEKQHG
DRAGVELTVLGKRRIQYEEELAYDPTNYDAWFSLARLEEDAYRADREDGEDVEPMRVREV
YERAVANVPPALEKRYWRRYIYLWLQYAAFEEIDTKDYDRARDVYKAAVKLVPHKTFTFA
KLWLAYAYFEIRRLDVSAARKVLGAGIGMCPKPKLFTGYIELEMRLREFDRVRTLYEKFL
TYDPSLSSAWIQWTQVESAVEDFERVRAIFELAVQQSLDMPEIVWKAYIDFEAGEGERER
ARNLYERLLERTSHVKVWISYALMEIATLGGGEDEDGNEIEGEAGDADLARKVFERGYKD
LRAKGEKEDRAVLLESWKSFEQEHGDEEMLAKVEDMLPTTRKRWRKAEDGSGELEEYWDL
VFPDDEKEANPTSFKFFQAAQAWAQQRAGQGEEGGLSYDLPSDSESENEDEDGDNREEEG
MDQD
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaagagacccaagagaccgtgctccaagagtgcgcaacagagcacccgctgct
gtacagattacagcggagcaactcttgagagaagcgcaagaacgacaggaacctactatc
caagcacccaaacagcgtgttcaggatttggaggagctttcagagtttcaggcgaggaag
agaacggagttcgagtcaaggatcagatactcaagggatagcatactcgcgtggaccaaa
tatgcgcagtgggaagccagccagaatgagtacgagcgatcaagatcagtgtttgagcga
gcgttggatgttgatcccagatcagtggatctctggattaagtacaccgacatggagttg
aaagctcgaaacatcaaccacgctcggaatctttttgacagagctatcaccctccttccc
cgtgttgacgcactttggtacaaatatgtctatcttgaagaactgcttctcaatgtttca
ggtgctcgtcaaatctttgagaggtggatgcagtgggagcccaacgacaaggcttggcag
agttacatcaagctcgaagaacgttataatgagctggatcgggcttccgccatttacgaa
cgctggattgcttgccgcccaattcccaagaactgggtggcttgggccaagtttgaggag
gacaggggccagccggacaaggctcgggaggttttccagacagctttggaattctttggt
gatgaggaggagcaggtggaaaaggcccaatcggtatttgctgcgttcgctaggatggag
actagattgaaggaatttgaaagggcgagagtgatttataaatttgccttggcgaggttg
cctagatcaaagtctgcgagcttatatgcccagtataccaaattcgagaagcaacatggt
gaccgtgctggtgttgagctcactgttctcggcaaacggcgcattcagtacgaggaagaa
cttgcctatgatcctacgaattatgatgcgtggttttctcttgctaggttagaagaagat
gcctatcgcgcggacagagaagacggcgaagatgttgagccaatgcgagttcgggaagtg
tacgagagggcagtggccaatgtccctcctgcgctggaaaaaaggtattggagaagatac
atttatctgtggttgcaatatgccgcatttgaggagattgacaccaaggactacgacagg
gcgcgagatgtctataaagcagctgttaagcttgtacctcataaaacgttcacctttgcc
aagctctggctggcctacgcatactttgaaattcgtcgacttgacgtctctgcggcccgc
aaagtccttggggctggtatcggcatgtgccccaaaccgaagctctttactggttatatc
gagttggagatgcggctgcgagagtttgatagggttcgaacattgtacgagaagtttttg
acttatgatccctccctcagttctgcctggatccaatggactcaagttgaatccgccgtc
gaagatttcgaacgtgttcgagcaattttcgaactcgccgtacaacaatctctggatatg
cccgagatcgtctggaaagcgtacattgacttcgaagccggcgagggggagcgcgaacgt
gcgcgtaatttgtacgagcgcttgctcgaacgtacttctcacgtcaaagtctggatttca
tacgcactcatggagattgcgacgcttggtgggggagaggatgaagatggcaatgagatt
gagggcgaggctggggacgctgacttggcgaggaaagtgtttgaaagaggttacaaggac
ttgcgagcgaagggtgaaaaggaagacagggccgtgttacttgaatcttggaagagtttc
gagcaggagcatggcgacgaggagatgttggccaaggtagaggatatgttgcccacaact
cgaaagaggtggaggaaggcagaggacgggagtggagagctggaagaatactgggacttg
gtattccccgacgatgaaaaggaagcgaacccgactagtttcaagttcttccaggctgct
caagcttgggctcaacagcgtgctgggcagggagaagaaggcggtttatcgtacgatttg
ccgtctgattcagagagtgaaaacgaggacgaggacggggacaatagggaagaagaggga
atggaccaggattag
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integrated database retrieval system
