Caloenas nicobarica (Nicobar pigeon): 135985068
Help
Entry
135985068 CDS
T11056
Symbol
TRPC4
Name
(RefSeq) short transient receptor potential channel 4 isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cnic04040
]
135985068 (TRPC4)
Ion channels [BR:
cnic04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
135985068 (TRPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
YVC1_C
Motif
Other DBs
NCBI-GeneID:
135985068
NCBI-ProteinID:
XP_065484063
LinkDB
All DBs
Position
1:188444896..188542374
Genome browser
AA seq
975 aa
AA seq
DB search
MAQFYYKRSVNAPYRDRIPLRIVRAESELSHSEKAYLNAVEKGDYASVKKALEEAEIYFK
ININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPVLLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVSVPRPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNSLIEEQSGNDLARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKMLTCVVIGLLFPVFSVCYLIAPKSPLGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIDRSDLSMQGPPPTIVEWMILPWVLGFIWGEIKQ
MWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFSKYSGLVPRESWDMWHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YETNEPGNCKGIRCEKQNNAFSTLFETLQSLFWSIFGLINLYVTNVKARHEFTEFVGATM
FGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVI
PSPKSLWYLIRWLWRHLCKKKIRRKPESFGTIGRRAADNLRRHHQYQEVMRNLVKRYVAA
MIRDAKTEEGLTEENFKELKQDISSFRFEVLGLLKGSKLSNLQTAKNNKDTASLSENEEN
GESEGNKKGKKNTFSLFDITTMIHPRSATIASEAHNVSNGSAMMVSESTKEKQKRVNFVT
DIKNFGLFHRRSKTNSVEQSTNKIYTVSEEVSRQQAEEQCEKSAELEEGELSMDCELNIQ
SPDEKCILAESQNNSNSLDSQEEGSICASETEKMELQNSEPATPQDQLDKELDICIDCDG
NQETIDQGDYVITRL
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggcccagttctactacaaaagaagtgtcaatgctccctacagagatcgtatccctctt
cgtattgtacgggcagaatccgaactgtctcattcagagaaagcctacctgaatgctgtg
gagaaaggagattacgccagtgtaaagaaagctttggaggaagcagaaatttatttcaag
atcaatattaattgcattgatcccctgggaagaactgcactccttattgcaattgaaaat
gagaaccttgagctcattgagctgctcttaagttttaatgtatatgtgggagatgctctg
ttgcatgccatacgaaaagaggtggttggtgccgtggagctgctgttaaaccacaagaag
cccagtggggagaaacaggtgccaccggtgcttctggacaagcagttttcagaattcacg
ccggatatcacacccattattctggctgcccacaccaacaattatgaaatcataaagctc
cttgtgcagaaaggcgtctccgtgcccaggccacatgaggtccgctgtaactgcgtggag
tgtgtctccagttcggatgtggacagcctccgccactctcgatccagactcaatatctac
aaggctctggcaagcccatcattgattgctttgtccagtgaggatcctttccttactgct
tttcagctgagctgggagctgcaggagctgagtaaagttgaaaatgaatttaagtcggag
tatgaggaactgtcacggcaatgcaagcaatttgcaaaagatctcctggatcagacacgg
agttccagggaattggaaattattcttaattacagagatgataatagcttgatagaagaa
caaagtggtaatgatcttgcaagattgaaactggcaattaagtaccgtcaaaaagagttt
gttgctcagcccaactgccagcagctgctcgcatcccgctggtacgacgagttccctgga
tggaggaggcgacactgggctgtgaagatgttgacctgtgttgtgataggactgcttttc
ccagtcttctctgtgtgctacctgatagctcccaaaagcccattagggctgttcatcaga
aagccatttatcaaatttatctgccatactgcatcctacttgacttttctgttcctgctg
ttgcttgcctcgcagcacattgacaggtcagacttgagcatgcagggaccgccaccaacc
atcgtcgagtggatgatattaccgtgggtcctgggttttatctggggtgaaattaaacag
atgtgggatggtggactacaggactacattcatgactggtggaacctcatggattttgta
atgaactccttgtacttagcaacaatctctttgaaaattgttgcattttcaaagtatagt
gggttagttccacgggagagctgggacatgtggcatccaaccctggtggctgaggccctg
tttgcaatcgcaaacatctttagctcccttcgcttgatctcattattcactgcaaattct
cacctgggacctctgcagatatctctaggaagaatgttgctggacattttgaagtttctc
ttcatatactgccttgtgctgttagcttttgcaaatggattgaaccagctatacttctac
tacgagacaaatgaacccggcaattgcaaaggaataagatgtgaaaagcagaataatgca
ttttcaacattatttgaaacgctgcagtcattattctggtctatatttggactcatcaat
ctctatgtgaccaatgtgaaagcaaggcatgaattcactgaatttgttggagccaccatg
tttggtacctataatgtaatctctctggttgttctactcaacatgctaatagccatgatg
aataattcttaccagcttattgctgatcatgcagatattgagtggaagtttgctcgaaca
aaactctggatgagttactttgaagaaggaggaactctgcccacgcctttcaatgtcata
ccaagcccaaagtctctctggtatctgatcagatggttatggagacatctttgcaagaaa
aaaattagaagaaagcctgaaagttttggaacaatagggaggcgtgcagctgacaatcta
agaagacatcatcaataccaggaagtcatgagaaatctggttaagagatatgttgcagca
atgataagagatgccaaaactgaggaaggactgacagaagaaaattttaaggagttaaaa
caagatatttccagctttcgttttgaagtcctgggtttattaaaaggaagcaagctgtct
aatttgcagactgcaaagaataacaaagacactgcctctctgtcagaaaatgaagaaaat
ggtgagagtgaaggaaacaagaaaggaaaaaagaacaccttcagcctttttgacataaca
acaatgattcatccaagatctgccactattgcctctgaagcacataatgtaagcaatggc
tcagcaatgatggtgtcagagtccacgaaggagaaacaaaagcgtgtgaattttgtaaca
gacataaaaaattttgggttatttcacagacgatcaaaaacaaactctgtggagcagagt
acaaataaaatatacaccgtttctgaagaagtttcccgtcaacaggcagaagaacaatgt
gagaaaagtgctgaactggaagagggagaactgagcatggactgtgaattgaacatccaa
agtcctgatgaaaaatgcattttagctgaatcacaaaataacagcaactctttggattca
caggaagaggggagtatttgtgcttcagaaacagagaaaatggagttacagaactcagaa
ccagccacaccacaggatcagctggacaaggagttggacatttgcattgactgtgatggg
aaccaggaaacaattgatcagggtgattacgtgataacaaggttgtga
DBGET
integrated database retrieval system
