Caloenas nicobarica (Nicobar pigeon): 135988227
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Entry
135988227 CDS
T11056
Symbol
NPNT
Name
(RefSeq) nephronectin isoform X1
KO
K06824
nephronectin
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04512
ECM-receptor interaction
cnic04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135988227 (NPNT)
04518 Integrin signaling
135988227 (NPNT)
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Gene cluster
GFIT
Motif
Pfam:
EGF_CA
MAM
cEGF
FXa_inhibition
EGF_3
EGF_PEAR1L
EGF
Plasmod_Pvs28
EGF_DL_JAG
EGF_MSP1_1
JAG1-like_EGF2
EGF_2
C_tripleX
hEGF
Motif
Other DBs
NCBI-GeneID:
135988227
NCBI-ProteinID:
XP_065490086
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Position
4:6759972..6809848
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AA seq
603 aa
AA seq
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MELSLRLLLASCLSLGAAGEFDRRWPRQIVSSPGLCRFGSRIDCCWGWARLSWGQCQPIC
QPGCKHGECVGPNKCKCHPGYTGKTCNQDLNECGLKPRPCKHRCMNTYGSYKCYCLNGYM
LMPDGTCSNALSCSMANCQYGCDVLKGEVRCRCPSPGLQLGPDGRTCIDIDECATGRVIC
PRFRHCINTFGSYICRCHKGFDLMYIGGKYQCYDIDECSLGHYQCGSFSRCYNTPGSYKC
KCKEGYRDNGTNCILIPKVMIEPPGPYHTFKGNSTLPKADSGIANRIPDVGSTRQPLRPP
FVPAIVTERPVIRPTTRPTPRPMTRPTPRPTTRPTPKPTTRYVPMTTRPVTTRPVTKPVT
RPAPLTPPQPTTLRPTLPPQRTPLMTTEEPSHVPIETTSSRGITDDNRIQVDPQKPRGDV
FIPRQPGVSNNLFEILEIERGITADEFEANDDPGVLVHSCDFDSGLCGWMKDKDDDLHWE
PVRDASGGQYLTISEPKGQEGGVAHLILPLGPVAQAGDLCLSFRHKVPGRHSGALHVFVR
KNGAHGPAVWGRNAGHGWRQTHITLRGLGIKSVIFKGEKGKGRTGDIGLDDVILRRGRCS
EEH
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggagctctccctgcggctgctcctggcgtcctgcctctccctgggggcggccggggag
tttgacagaaggtggcccagacaaatagtctcctctccaggactgtgtcggtttggaagt
agaatcgactgctgctggggctgggcccggttgtcctgggggcaatgccaacctatatgc
cagccaggatgcaaacacggcgaatgtgttgggccaaacaagtgcaagtgtcacccggga
tacactggaaaaacctgcaaccaagatctaaatgagtgtggactaaagccacggccgtgc
aaacaccggtgtatgaatacctacggcagctacaagtgctactgtctgaacggctacatg
cttatgccagatggaacgtgctcaaatgccctttcttgctccatggcaaactgtcagtat
ggctgtgatgtactgaaaggtgaagtccgctgccggtgcccttctccaggactccagcta
gggcctgatggcaggacttgcatagatattgatgaatgtgctactgggagagttatctgt
ccacgatttaggcactgcatcaatacttttggaagctacatttgcaggtgtcataaaggc
tttgatctaatgtacattggaggcaaataccaatgctatgatattgatgaatgttccctt
ggccactatcagtgtggcagtttttcacgatgttacaatacaccaggatcctacaaatgc
aagtgtaaagaagggtacagagacaatggaacaaactgcatacttattcctaaagttatg
attgaaccacctggtccatatcatacattcaagggcaacagcacgctccctaaggcagac
agtggtatagccaataggattcctgatgttggaagcacaaggcaacccctcagaccaccg
tttgtacctgctattgttacagaaaggccagtgatcaggccaacgactcgacctacaccc
aggccaatgactcgacctacacccaggccaacaactcgaccgacgccaaagccaaccact
aggtacgtgccgatgacaacaaggccggtgacaacaaggccagtaacaaagccagtgaca
aggcctgcacctctaacaccacctcagcctacaacgttaagacctacgctaccaccacaa
agaactcctctgatgacaactgaagagccttcacatgttcctattgaaactacatcttcc
cgaggaattacagatgacaacaggatccaggtagatcctcagaaaccccgaggagatgtg
ttcattccacgccagcctggagtgagcaataatctgtttgaaatacttgaaatcgaaaga
gggattaccgctgatgaatttgaagcaaacgatgacccaggagtgctggtgcacagctgt
gattttgacagcggactgtgcggatggatgaaggacaaagacgacgacttgcactgggaa
ccagtgagagatgcgtcagggggacagtatctcaccatctccgagcccaaaggccaagaa
ggaggagttgcacatctgatcctgcccttgggtcccgtggctcaggccggcgacttgtgc
ttgtccttcaggcacaaggtgcccggacggcattctggtgccctccacgtcttcgtaagg
aagaacggagctcacggaccagccgtttggggaagaaatgctggtcacggctggagacag
acacacataactttacgaggactgggcatcaagagtgttattttcaaaggggaaaaaggg
aaaggaagaactggggatattggactagatgacgtgatcttgaggaggggacgctgctct
gaggagcattag
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