KEGG   Caloenas nicobarica (Nicobar pigeon): 135989300
Entry
135989300         CDS       T11056                                 
Name
(RefSeq) signal recognition particle subunit SRP54 isoform X1
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
cnic  Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03060  Protein export
Brite
KEGG Orthology (KO) [BR:cnic00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    135989300
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cnic02044]
    135989300
Enzymes [BR:cnic01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     135989300
Secretion system [BR:cnic02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   135989300
  Eukaryotic Sec-SRP protein
   135989300
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N cobW CbiA AAA_22 AAA_33 DUF2209 nSTAND3 NPHP3_N ResIII MeaB AAA_17 MobB AAA_30 nSTAND_NTPase5 AAA_19 ATP_bind_1 PduV-EutP APS_kinase 6PF2K AAA_31 AAA_18 Zeta_toxin AAA_16 AAA
Other DBs
NCBI-GeneID: 135989300
NCBI-ProteinID: XP_065492105
LinkDB
Position
5:complement(26991658..27027469)
AA seq 504 aa
MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAI
DLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNIIMFVGLQGSGKTTTCSK
LAYFYQRKGWKTCLICADTYRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFK
NENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEAQAKAFKDKV
DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI
EGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDFM
SKGNEQESMARLKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQEL
LTQYTKFAQMVKKMGGIKGLFKGGDMSKNVNPSQLAKLNQQMAKMMDPRVLHHMGGMAGL
QSMMRQFQQGAAGNMKGMMGFNNM
NT seq 1515 nt   +upstreamnt  +downstreamnt
atggttctagcagatcttggaagaaaaataacttcagcattacgctcactgagcaatgct
acaattatcaatgaagaggttttaaatgctatgttgaaagaagtatgtacagcattactg
gaagctgatgttaatattaaacttgtgaagcagctcagagaaaatgtcaagtctgcaatt
gatcttgaagaaatggcatctggccttaacaagagaaaaatgattcagcatgctgtcttt
aaggaacttgtgaagcttgtggatcctggagtcaaggcatggacacctaccaaaggaaaa
cagaatattataatgtttgttgggttgcaaggaagtggtaaaacaacaacctgttcaaag
ttagcatacttctatcagaggaaaggttggaagacgtgtttaatttgtgcagacacatac
agagcaggtgctttcgaccagctaaagcagaacgccacaaaagcaagaattccgttttac
gggagttatacagaaatggatcctgtaattattgcctcagaaggtgttgagaaattcaag
aatgaaaacttcgaaataatcattgttgatacaagtggacgtcacaaacaggaagactct
ttgtttgaagagatgttacaagttgctaatgccatacaaccagacaacattgtttatgtg
atggatgcttccattggccaagcttgtgaagctcaagctaaagctttcaaagataaagta
gatgtggcttctgttattgttactaagcttgatggacatgcaaaaggaggtggagctctt
agtgcagttgctgccacaaagagtcctattatttttattggaactggagaacacatagat
gactttgaaccctttaaaacacagcctttcatcagcaaacttcttggtatgggtgatatt
gaaggattgatagataaagtaaatgagttaaagctggatgataatgaagcactcatagaa
aagctcaaacatggtcaatttacattacgggatatgtatgaacaattccaaaacatcatg
aaaatgggaccattcagtcagatcttgggtatgatccctggttttggaactgacttcatg
agtaaaggcaatgaacaggaatcaatggcaaggctaaagaaactgatgactataatggac
agtatgaatgaccaagaacttgacagtacagatggtgccaaagttttcagtaagcagcca
ggaagaatccaaagagtagcaagaggttcaggtgtttctaccagagatgttcaggagcta
ttgacccaatacactaagtttgcacagatggtgaaaaagatgggaggcatcaaagggctt
ttcaaaggtggtgatatgtcaaagaacgtaaacccatctcagttggccaaactgaaccag
caaatggcaaagatgatggatccaagagttcttcatcatatgggtggcatggcaggattg
cagtcaatgatgagacaatttcaacaaggtgctgctgggaatatgaaaggcatgatggga
ttcaataatatgtaa

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