Caloenas nicobarica (Nicobar pigeon): 135992782
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Entry
135992782 CDS
T11056
Symbol
LINGO1
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnic04131
]
135992782 (LINGO1)
Membrane trafficking [BR:
cnic04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
135992782 (LINGO1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_9
LRRNT
Motif
Other DBs
NCBI-GeneID:
135992782
NCBI-ProteinID:
XP_065498279
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Position
10:complement(5328980..5345650)
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AA seq
619 aa
AA seq
DB search
MQVRDRMVAEEASMRSPILACWQPILLLMLGSILSGSATGCPPRCECSAQERAVLCHRKR
FMVVPEGIPTETRLLDLGKNRIKTLNQDEFANYPHLEELELNENIISAIEPGAFNNLFNL
RTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVY
ISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINTIRDYSFKRLYRL
KVLEISHWPYLDTMTSNCLYGLNLTSLSITHCNLTSIPYVSVRHLVYLRFLNLSYNPIVT
IEGSMLHDLLRLQEIQLVGGQLTMVEPFAFRGLNYLRILNVSGNLLTTLEESAFHSVGNL
ETLILDNNPLACDCRLLWVFRRRWRLNFNKQQPTCSTPEFVQGKEFKDFPDVLLPNYFTC
RRARIRDRKPQQIFVDEGHTVHFVCRADGDPPPTIMWLSPRKHLISTKTNGRLTVFPDGT
LEVRYAQIQDNGTYLCIASNAGGNDTMLAHLHVRSYSPDWPHQPNKTFAFISNQPNESDA
NSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRK
SDAGISSADAPRKFNMKMI
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgagagataggatggtagctgaggaggcgagtatgcgcagcccaatcctggcc
tgctggcagccgatcctcctcctgatgctgggctccatcctgtccggctctgccacgggc
tgcccgccgcgctgcgagtgctctgcccaggagcgcgccgtcctgtgccaccgcaagcga
ttcatggtcgtgcccgaggggatccccaccgagaccaggctgctggacttgggcaagaac
cgcatcaagacactcaaccaggatgaatttgccaactaccctcacctggaggagctggag
ctaaatgagaacattatcagtgccattgaacctggggctttcaacaacctcttcaacctc
aggacgctggggctcaggagtaacagactcaagttgatccccttgggagtgtttactgga
ctcagcaaccttaccaagctagacattagtgagaacaaaattgtgatcctcttagactac
atgttccaggacttgtacaacctgaagtctttggaggtgggggacaatgatcttgtctac
atctcccaccgggctttcagtggcctcaacagcctggagcagctgaccctggagaaatgc
aacctgacctccatccccacggaggccctgtcccaccttcacggcttgatcgtgctgcgg
ctgcgccatctgaacatcaacaccatccgggattactcattcaagaggctgtaccggctc
aaggtgcttgagatctcacactggccctacctggatactatgacgtccaactgcctctat
gggttgaacctgacctccttgtccatcacccactgcaacctgacatccatcccgtatgtg
tcagtgaggcacttggtttacctccggttcctgaacctgtcctacaatcccattgtcacc
atcgagggctccatgctccatgacctgctcaggctgcaggagatccagctggtgggaggg
cagctcaccatggtcgagcccttcgccttccgcggcctcaattacctgcgcatcctgaac
gtgtcggggaatttgctgaccaccctggaggagtcggccttccactcggtgggcaacctg
gagacgctcatcctcgacaacaaccccttggcctgtgactgtcggctgctctgggttttc
cggcggcgatggaggttgaacttcaacaagcagcagcccacctgctccactcccgagttc
gtccagggcaaggagttcaaagacttccccgatgtcctcctgcccaactacttcacctgc
cgccgagcacggatacgggaccgcaaacctcagcagatctttgtggatgaaggccacacg
gtccattttgtctgccgggcagatggggacccaccccccaccatcatgtggctctctccc
cgcaagcacctcatctctaccaaaaccaacgggcgcctcactgtcttccccgacggcaca
ctggaggtgcgctacgcccagatccaggacaacggcacctacctatgcatcgccagcaac
gcgggtggcaacgacaccatgctggcccacctgcacgtgcgcagctactcccccgactgg
ccccaccagcccaacaagactttcgcgttcatctccaaccagcccaacgagagcgatgcc
aacagcacgcgcgccaccgtgcctttcccctttgacatcaagactctcatcatcgccacc
accatgggcttcatctccttcctgggcgtcgtgctcttctgtctggtgctcctcttcctg
tggagccgggggaaaggcaacaccaagcacaacatcgaaatcgagtacgtgccgcgcaag
tccgacgcgggcatcagctctgccgatgcgccgcgcaagttcaacatgaaaatgatttaa
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