Caloenas nicobarica (Nicobar pigeon): 135993910
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Entry
135993910 CDS
T11056
Symbol
SH3TC2
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnic04131
]
135993910 (SH3TC2)
Membrane trafficking [BR:
cnic04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
135993910 (SH3TC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
SH3_2
SNAP
SH3_1
TPR_1
TPR_2
Motif
Other DBs
NCBI-GeneID:
135993910
NCBI-ProteinID:
XP_065500169
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All DBs
Position
13:2211870..2229607
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AA seq
1349 aa
AA seq
DB search
MRLDPGQPKGSHAAAESVPPAVGIWRSDSSDLRGEECDSCCPRSPVLLPRWDLHHAAAER
RGKWWREKTMASGKVGASEPSDPATKAAESPPDTPSVLLAVEEGFPPEISLFFSVESRSS
RCLNSQLQEAARKKLWALESDDRGVCALFKELSARLVCMQAQEDRFILTFKTLEEVWKFS
TYLTLGYVGSCLEQLLFDQEYWLNCALMEDTEVRVTVDEDRLAAIYMGLLLQEGNFFSRA
VPSAWQPEQEGEEGLQLCENTLIHVKNIGEESKWEGMSLLTGQRGLVPLSALEPITQPFY
QWFLKNYAVGFGISQEISGTTSRPVVKGRCTATEDHRGAAWDELSFSKGDSIEIIGFLVP
GLPWFVGKSLSSGTIGFVSTRYINPEACEPLGKGSVFLSEEEKSPLLRIPCNGGEQHVTT
LLGDLARTDITSVYRLDGFEPTAMLPKVPSGAVLPGCKDIQLLQSWEEINDVVTTSTSEL
SSPGSESVSPTLEDFLLEKLDDFDDPKFFIDLNAGHMEDADVFDPILTFLNQDSYVPSFQ
SLYDLSFSFLNSTFYGFSDEDELVLYLETSRNWAKRTHSVWAHVRLCFLLGKLCIKKVKL
SQARVYFEEAMSTLDRGFGDLPLLAALHVNLASIYLKQNMKHKFSSLLGKTVALLVCLPG
HSFSSENELEVMMYVLREAIAVGNVPLEARVCFLIVKLFLQLGKNDEVLPFTEHLQCLST
TLLIPDASSVPLDATPILSYLYDKKYLPNIALASARLFVPSGIKGAPTPIWRAGFILQNA
SKLLGNQLERSSIPALACFYLKQALHFSCERRAVPIQRTLCAILSRMYLQHGVLDGAVCY
AATAVTLSRLMGEEEAFASSLSLGWMYLLHRQPGPAADIMWQLLRSLHRTDSVTQGGAVH
NLLAIALKGEGQVQKAAENYLLALHKAKQTGNKRNQAIALANLGQLSLSRGANQLSELYL
LQSAQLYAELQGSEDLEMELVQVLLWLAQAMVNRQRMEDGKLCYELALVFALKWHNVRSQ
LHITESLCHFYSKVSPDLQACITYHEHWVSLTQQLQDRELEGNVRRTLGQLYQALGTSEA
LRQSLDCTKQSLRIFIDLEETVKAAEAWLQAGKLYYLLQEDELVEMYFQAAIQTALKSEN
FSLAMDLYEKAGDTFFSGSRNRDRAVEFYRGGAVPLARKLKATKTELRLFNKLAELQIGL
QGYEKALEFATLAARLSIRVGDELQELVAFHRLATVYYFLHMYEMAEDCYLKTLALRPPL
LQCSGEALYYCKVYCHLGNLTLHKLKDEQDAAAYFLLALAAATELGDQDLQGLICAKLGD
IPGALRGTESTPGCATYRPRWLSEGGHIV
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atgagacttgatcccgggcagcccaagggatcccacgcagcagccgaatcggtccctcct
gctgttggcatctggcgttcagacagttcagatctcagaggcgaagagtgtgactcctgc
tgcccccgctcgcctgtgctcctgccccgctgggacctgcatcacgccgcagccgagcgc
cggggaaaatggtggcgggagaagaccatggcatcaggtaaggttggtgcatcggagcca
agcgaccctgctaccaaggcagcagaaagtccaccggacaccccctcggtgctgctggct
gtcgaggaggggtttccaccagagatttcactcttcttctccgttgagagccgttcctcc
cggtgcctcaattcccagctccaggaagcagccagaaagaagctgtgggccctggagagc
gacgacagaggtgtttgtgccctgttcaaggagctgtcagccaggctggtctgtatgcaa
gcacaggaggatcggttcatcctcaccttcaaaaccctagaagaagtctggaagttttcc
acatatttgactttagggtacgtgggcagctgcttggagcagcttctctttgaccaagag
tactggctaaactgtgctctgatggaggacacagaggtcagagttactgtggatgaagat
cgcttggctgccatatatatgggtctgctcctccaggaaggtaactttttttccagagca
gtgcccagtgcctggcagccagagcaggagggagaggaaggcctgcagctctgcgagaac
acgctgatccatgtgaagaacatcggggaggagtccaagtgggaaggaatgtccttactg
acaggtcaacgaggcctggtgcctctgtcagctctggagccaataactcagccattttac
caatggttcctgaagaattatgctgtgggttttggcatctcccaggagatcagtgggaca
acctctcgaccagttgtcaaaggtagatgcacagccacagaggaccacagaggagcagca
tgggatgaactgagtttctccaaaggagacagcatagaaatcatcggcttcctcgttcca
ggactcccatggtttgtgggcaaatccctcagcagtgggaccatcggctttgtttctacc
cgatacataaatcctgaggcttgtgaacctctgggaaagggctcagtgtttctgagcgaa
gaagaaaagtccccactcctgcgcatcccttgcaacggtggcgagcagcatgtcactacc
ctcctgggtgacctggcacgcactgacatcacctctgtgtaccgcctggatggttttgaa
cccacagccatgctcccaaaggtgccatcaggggctgttctccctggctgtaaagatatc
cagctgctccagtcttgggaggaaataaatgatgtggttacaaccagtacctctgagctg
tctagcccagggagtgaatcagtctctcctacgttggaagattttctcctggagaagctg
gatgattttgatgatcccaagttctttattgacctgaatgctggacacatggaagatgct
gatgtctttgaccccatattgaccttccttaaccaagacagttatgtgcccagttttcaa
agcctctatgatctcagtttttcctttctcaattccactttttatggtttctctgacgag
gatgaactggtcttgtaccttgagacatccaggaactgggccaagagaactcattcagtt
tgggctcatgtcaggctctgtttcctcttgggtaagctctgcatcaaaaaggtaaagtta
tcccaggcccgagtctactttgaggaagccatgagcaccctggacaggggtttcggggac
ctgcctctgctggctgcactgcacgtgaacctggcctccatctacttgaaacagaacatg
aaacacaaattctcctccctgctgggaaaaacagtggccttgcttgtctgcttgcccggc
cactctttcagctctgagaatgagctggaagtcatgatgtacgtcctgagggaagccatt
gctgtgggtaatgtgcctttggaggcacgggtctgcttccttattgtcaagctcttccta
caactgggcaaaaatgatgaagtgctgccctttactgagcatcttcaatgtctcagcacc
accttactcatcccggacgctagttctgtgccgctggatgccactcctatcttgagctac
ctgtatgacaagaagtacttgccaaatatcgcactggcctctgccaggttgtttgttccc
agcggcatcaagggggcaccaacacccatttggagagctggcttcatcctccaaaatgct
tccaagctcttggggaaccaactggagaggagcagcatcccagcactggcttgtttctac
ctcaagcaagcactgcatttctcctgtgagaggagagctgtgcccatccagaggacactg
tgtgccatcttgtccaggatgtacctccagcatggagtgttggacggggcggtttgttac
gcagccacggctgtaaccctcagcagactcatgggcgaggaggaggcttttgcatcttcc
ctctctttggggtggatgtatctcctgcacaggcagccgggcccggctgcagacatcatg
tggcagctcttgcgctctctgcacaggacagacagcgtgacccagggtggagccgtgcac
aatctcctggccattgccctcaaaggagaagggcaggtgcaaaaggctgcagagaactac
ctcctggccctgcacaaagccaagcagaccgggaacaagaggaaccaggctattgccctg
gctaacctggggcagctgagcctctcacgtggggcaaaccagctgtctgagctctacctg
ctccagtcggctcagctctacgctgagctccagggaagcgaagacctggagatggagttg
gtgcaggtgctgctgtggctggcgcaggccatggtgaacaggcagaggatggaagatggc
aaactctgttatgaactggcgttggtttttgccctgaagtggcataacgtgaggagtcag
cttcacatcactgagtctctctgccatttctacagcaaagtgtcccccgatctccaggcc
tgcattacctaccatgagcactgggtatctttgacacaacagctgcaggacagggagctg
gagggcaatgttcggcggaccctcggccagctctaccaggctttgggcacatctgaggct
ttgagacagtccctggactgcaccaaacagagtctaaggatcttcattgaccttgaggag
actgtgaaagcagcagaggcctggctgcaggcaggaaagctctactaccttctgcaggaa
gatgagctggtggaaatgtactttcaggcagccattcagactgctctgaaatccgagaac
ttctccttggccatggatctttatgaaaaagcaggtgataccttttttagtggcagccga
aacagggatcgagcggtggagttttataggggaggtgctgtgcccttggccaggaaacta
aaggccactaagacagagctgcggctgttcaataagctggcagagctgcagatcgggctg
cagggctatgagaaggcgctggagtttgccacgctggcagccaggctgagcatcagggtc
ggagatgaattgcaagagctggttgcattccaccgcctggccacagtctactattttctg
cacatgtatgagatggcagaagattgctacctgaagacacttgccttgcgtccccccttg
ctgcagtgctctggagaggccctgtactactgcaaggtgtattgccaccttggcaacctg
accctgcacaaactgaaggatgaacaggatgcagcagcctacttcctcctggccctcgct
gcagcgaccgagctgggagaccaggacctgcaaggcctcatttgcgccaagctgggtgac
atccccggtgccctgcgggggactgagagcacaccgggctgtgccacgtaccggcccagg
tggttgagcgaaggcggccacatcgtctga
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