Caloenas nicobarica (Nicobar pigeon): 135995674
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Entry
135995674 CDS
T11056
Symbol
PTCHD1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cnic04990
]
135995674 (PTCHD1)
Domain-containing proteins not elsewhere classified [BR:
cnic04990
]
Other domain-containing proteins
Patched domain-containing proteins
135995674 (PTCHD1)
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Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
135995674
NCBI-ProteinID:
XP_065503245
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All DBs
Position
1:110089256..110123800
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AA seq
888 aa
AA seq
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MLRQVLHRGLGTSFSRLGHFVASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPTH
SLAKIERNLVDSLFPVNRSKHRLYSDLQTPGRYGRVIITSFRKANMLDQHHTDLILKLHS
AVTRIQVQRPGFNYTFAHICILNNDKTCIVDDIVHVLEELKAARSSNRTNFAITYPITHL
KDGREVYNGHQLGGVTVHSKDRVKSAEAIQLTYYLQAINSLNDMVAEKWESIFCDTVELF
QKSNRKVKMYPFTSSSLKEDFQKTSRVSERYLITSLVLVVTLAILCCSMQDCVRSKPWLG
LLGLLTVTLATLTAAGIINLTGGKYNSTFLGIPFVMLGHGLYGTFEMLSSWRKTREDQHV
KERTAAVFADSMLSFSLTTAMYLVTFGIGASPFTNIEAARIFCCNSCIAIFFNYLYVLSF
YGSSLVFTGYIENNYQHSIFCRKVPKPEVLQEKPAWYRFLLTAKFSEDTADSEETNTYES
HLLVWFLKRYYCDWITNTYVKPFVVLFYLVYISFALMGYLQVSEGSDLSNIVATATRTIE
YTTAQQKYFSNYSPVIGFYIYESIEYWNTSVQEDVLEYTKGFVRISWFESYLNYLRKLNI
STGLPKKNFTDMLRNSFLKAPQFAHFSEDIIFSKKYNNEVDVVASRMFLVAKTMETKREE
LYDLLETLRKLSLTSKVKFIVFNPSFVYMDRYASSVGAPLQNSCISALFLLFFSAFLVAD
SLINVWLTLTVASVEFGVIGFMTLWKVELDCISVLCLIYGINYTIDNCAPLLSTFVLGKE
FTRTKWVKNALEVHGVAILQSYLCYIVGLIPLAAVPSNLTRTLFRCLFLIALVTFFHCFA
ILPVILTFLPPSKKKRKEKKNPENREEIECVEMVDMDSTRVVDQITTV
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgttgcggcaggtcttgcacagggggctggggacgtccttctcccggctcggccacttc
gtcgccagccacccggtgttcttcgcctcggcgcctgtgctcatctccatcctgctaggc
gccagcttcagccgctaccaggtggaggagagcgtggagcacctcctggcccccacgcac
agcctggccaagatcgagaggaacctggtggacagcctcttcccggtgaaccgctccaag
caccggctctactccgacctgcagacgccggggaggtacggcagggtgatcatcacctcc
ttccgcaaggccaacatgctggaccagcaccacaccgatctcatccttaagttgcactct
gctgtgaccaggatccaagttcaaagacctggtttcaattacacgtttgcccatatatgt
atcctgaacaatgacaagacatgcatagtggacgacatagtgcatgtactggaggaatta
aaagctgctcgttcttctaatcgaactaattttgcaatcacttatccgattactcactta
aaggatggcagggaagtgtataacgggcatcagcttggtggggttacggtgcacagcaaa
gaccgcgtgaagtctgcagaagccattcagctcacctactacttgcaggcaatcaactcc
ttgaatgacatggtggcagagaagtgggaatccattttttgtgacactgttgaacttttc
cagaaatccaacaggaaagtcaaaatgtatcctttcacttcttcttcgctgaaggaggat
ttccagaagacgagcagggtgtcagaacgctacctgatcacaagcttggtccttgtggtc
accttggccattctctgctgctccatgcaggattgtgtccgcagcaaaccctggcttggc
ctcctgggattgctgactgtgacccttgccaccctgactgcagctgggatcatcaatctc
actggtgggaaatacaattccaccttcctgggaatccccttcgtgatgttaggtcatggg
ttatatgggacttttgaaatgttgtcctcctggagaaaaactagagaagaccaacacgtt
aaagagaggactgcagctgtatttgcagactccatgctctcgttttctctcaccactgcc
atgtacctggtcacttttggaataggtgccagtcccttcactaacattgaagcagccagg
attttctgctgcaattcctgtattgcaattttcttcaactacctctatgtactctccttt
tatggttccagcctggtgtttactggctacattgaaaacaactaccagcatagtatcttc
tgcagaaaggtaccaaagccagaggtattgcaagagaagcctgcatggtataggtttctt
ctgacagccaaattcagcgaggacacggcggattcagaggaaacaaacacttacgagagt
catcttttggtttggttcctgaaacgctattattgtgactggataacaaacacttatgtc
aagccttttgtagttctcttttaccttgtttatatttcctttgccttaatgggctacctg
caggtcagtgaagggtcggacctgagcaacatcgtagcgaccgccacacggaccattgag
tatacgactgcccagcagaagtatttcagtaactacagcccagtgattggcttctacatc
tacgagtcgatcgagtactggaacaccagtgtccaggaggacgtgctggagtataccaag
ggctttgtgaggatatcttggtttgaaagctacttaaattaccttaggaaactcaacata
tctactggattgcccaagaagaacttcactgatatgttgaggaactccttcctgaaggcc
cctcagtttgcccatttttcagaggatatcatattttccaagaaatacaacaatgaagtt
gatgtcgtggcctccaggatgttcttggtggccaagacaatggaaaccaagagagaagaa
ctttatgacctcctggagaccctgaggaagctctctctcacctccaaggtgaaattcatc
gttttcaatccatcgtttgtgtacatggatcgttatgcctcttcagtgggagccccctta
caaaactcctgcattagtgctttatttttgctcttcttctctgcattcctggtggcagac
tctctgatcaatgtctggctcactctaactgttgcctcggttgagtttggagttataggc
tttatgaccttgtggaaagtggaactagattgtatttctgtgttgtgcttaatttacgga
attaattatacaattgacaactgtgctccactgttatcaacctttgtcctgggcaaagag
ttcacaagaactaaatgggtgaaaaatgccctggaagtgcatggggtagctattttgcag
agctatctctgctatattgttggtctgattcctcttgcagctgtgccttcaaatctgacc
cgtacactgttcaggtgcttgtttttaatagcattagtcaccttctttcactgctttgcc
attttacctgtgatactgactttcctgccaccatccaagaagaagaggaaagagaagaag
aatcctgaaaaccgtgaggaaatagagtgtgttgaaatggtggatatggatagcacccga
gtggttgaccaaattacaacagtctaa
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