Caloenas nicobarica (Nicobar pigeon): 135996005
Help
Entry
135996005 CDS
T11056
Symbol
TSEN54
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cnic03016
]
135996005 (TSEN54)
Transfer RNA biogenesis [BR:
cnic03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
135996005 (TSEN54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
Motif
Other DBs
NCBI-GeneID:
135996005
NCBI-ProteinID:
XP_065503751
LinkDB
All DBs
Position
18:complement(4818566..4829086)
Genome browser
AA seq
516 aa
AA seq
DB search
MEAGGSRSPSAAEVLAAHGRKAPPRPHGQKDFIPDGSAEQAEKLRRCREEQWQLLSEEPV
ERLGNLVKAEWKPGQGIVELQSPAGKFWHTMGFSERGKQCLLPEEALYLLECGYVQLFYR
DLPLSVQEAYEILLSQEAVSLPHYQVFSHLKQLGYIVLRFDPSTVPSPYERQLNLESHCK
SSGKHHCKRRRSSSPPSHEKKPKVSEDFAEAEGTSKKAKDDCGDSSCLPINEKPLSEQPK
ESDASSGERESSPAPLHTGQKDTLTPCRSQAGDHKGSSTGTCAPHWDFTSIIFPNVAPDQ
PCTHLPIPDDRVLPKNVPGREVDAACWCARINQKREKMSQKEREQRERESRYKSSVNADR
EVRRCSSWQEYKALLKQRSQQKVWKRPPHLWDQAVTPLLRPDEATSSAALLQQISVLQPS
HILDGASRLQEDPEGMKIDFNVYQADAVAKFKKTNPGKPYVRMCVRSFDEQIPSLRALKQ
VTYQSGDIPVVFALVDHGEIAFFSLKEFKLPVDVNH
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggaggccggcgggtcgcgcagccccagcgcggcggaggtgctggcggcccacggccgc
aaggcccctccgcgtccccacggccagaaggatttcatccccgacggctcggccgagcag
gcggagaagctgcgccggtgccgggaggagcagtggcagctcctctccgaggagcctgtg
gagcggctggggaatctggtgaaagctgagtggaagccaggacagggcattgtggagctg
cagtcccctgcggggaagttctggcacaccatggggttctcagagcgtggcaaacagtgc
ctgctgcccgaggaggctctgtacctgctggagtgtggctatgttcagctcttctacaga
gatctgcccttgtcagtccaggaagcctatgagatcctgctctcccaggaagcagtgagc
ctgccacattaccaggtgttcagccacttgaagcaactgggttatattgtactgagattc
gaccccagcactgtcccgtctccctacgagaggcaactgaacctggaaagtcactgcaag
agctctgggaaacaccattgcaaaaggaggaggagttctagccccccgtcacatgagaag
aaacctaaggtatctgaggactttgcagaagctgaagggacctcaaaaaaagctaaagat
gactgtggagactccagctgccttcccatcaatgaaaagcccttgtcagagcagccaaag
gaatcagatgctagcagtggagagagggagtcaagcccagctcctcttcatacgggacaa
aaggacaccttgaccccctgtaggagccaggctggagaccacaaggggagcagcactggc
acctgtgcaccccactgggattttacgagcatcatcttcccaaacgtggccccagaccag
ccatgcacacatctccccatacctgatgacagggtcctgccaaagaacgtgccagggagg
gaggttgatgcagcttgctggtgtgcgcgcatcaatcagaaacgggagaagatgtcgcag
aaggaaagggagcagcgagagagggagagcaggtacaagagcagtgtcaatgctgaccgg
gaggtgaggcgctgctccagctggcaggagtacaaagcccttttgaagcagaggagccag
cagaaggtttggaaacggccgccacatctctgggaccaagctgtcactccacttttgcgg
ccagatgaagctacctcatcagctgcgctcctccagcagatcagcgtgctgcagccctcc
cacatactggatggagcctcccggctgcaggaggacccagagggcatgaagatagacttc
aatgtgtatcaagcagatgctgtggccaagtttaagaagacaaaccctgggaagccatat
gtcaggatgtgtgttcggagctttgacgagcagattccatctcttcgggctttgaagcag
gttacatatcagagtggggacatcccggtggtctttgcactggtggatcatggagaaatt
gcctttttttcgctaaaggaattcaagctgccagttgatgttaatcactga
DBGET
integrated database retrieval system
