Caloenas nicobarica (Nicobar pigeon): 135996525
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Entry
135996525 CDS
T11056
Symbol
TRAF1
Name
(RefSeq) TNF receptor-associated factor 1
KO
K03172
TNF receptor-associated factor 1
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
135996525 (TRAF1)
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Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
zf-C3HC4
zf-RING_UBOX
TRAF3_RING
TRAF2_zf
zf-C3HC4_2
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
135996525
NCBI-ProteinID:
XP_065504668
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Position
19:complement(9795698..9810739)
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AA seq
558 aa
AA seq
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MAEKTTRGPQDVPSSSPDENEFPFGYPSNICEDAPDQKYLCSNCNNVLKKALQTLCGHRY
CSACLSWIVRNNKNAICQKCKEEDSSTLSEGSLLAEERAFGDAAINKEISELKVHCVTLG
CSWSGIMKNFEEHQSLCEYALIPCHTGCGHMVMRKKLADHLENGCVNNVTMCQKCKRSLS
SSEYQEHSCEGNLCKEQKHVQAETPPKEKNHSTPLANKDGCRFSEVGCSFRGSKEKMRDH
EKTAVGPHMLLLLQHIKQLKTSLCSAAKAANGFVPQPGLNVNGAGKSISDLQIPAGLELS
GDLEEDCFPGSSVSEDESVLQQLVKEKVISELENKLHVFENIVAVLNKEVETSNLEITAF
RRQSELDQNIIRGLELKIAELHRCLTQKDTGLSNLHKSLLFSEQASYDGVFLWKITDVGR
KLQDSVTGRTVSLYSPAFYTAKYGYKVCLRVYLNGDGTGKGTHVSLFFVVMKGDYDALLP
WPFRHKVTFMLLDQNNREHIIDAFRPDLTSASFQRPVNDMNVASGCPLFLPLSKLQSPKY
AYVKEDTLFLKCIIETNQ
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaaaacaaccagaggcccacaggatgtccccagctcttctcctgatgaaaac
gaatttcctttcggatatcccagtaatatttgtgaggatgcgcctgaccagaagtacctg
tgcagcaactgcaacaatgttctgaagaaagccctgcagacgctctgcgggcaccggtac
tgctcagcctgcctctcctggatcgtacgaaacaataaaaatgcaatttgccagaaatgt
aaagaggaagacagcagcacattaagcgagggaagcctactggcagaagaaagggctttt
ggtgatgctgccattaataaagagatttctgagctcaaagtccactgtgtgacgctggga
tgcagctggtctgggatcatgaaaaattttgaagagcatcagagcttgtgtgaatatgct
ttaatcccttgtcacactggttgtggacacatggtgatgagaaagaagcttgcagatcat
ttggaaaatggatgtgttaataatgtgacgatgtgtcagaagtgtaagcggagcttgtcc
agtagtgagtaccaagaacattcatgtgaaggcaatttatgtaaagaacaaaaacatgtg
caagcagagacaccaccaaaggaaaagaaccactctacacccttagcgaacaaggatgga
tgtcgtttttctgaagtcggctgttcgtttaggggaagcaaagagaaaatgagagaccat
gaaaaaactgcagttgggccccacatgctgcttctgctgcagcacataaagcaactgaag
acaagcttgtgctctgctgccaaagctgcaaacggtttcgtcccacagccagggctgaat
gtgaatggtgcaggaaaaagcatctctgacctgcagatcccagcggggctggaactcagt
ggggatctggaagaagactgttttcctgggtcttctgtttctgaggatgaatctgttctc
caacagcttgtgaaggagaaagtgatttctgagctagaaaataagctgcatgtgtttgag
aatatcgtggcagtgctcaataaagaggtggagacctctaatttggaaatcacagccttt
cggagacagagtgaactcgatcaaaatataatacgaggccttgaactgaagatcgcagag
ttgcaccggtgcctgacgcagaaggacacaggcctgagcaatcttcacaagagcctcctg
ttctctgagcaagcctcctatgatggggtctttctgtggaaaataacagatgttggcagg
aagttacaagactctgtgactggaagaacagtcagtttgtattcaccagctttttacacg
gcaaagtacggctacaaggtctgtctgcgggtctatctgaacggggacgggacaggcaaa
gggacccacgtgtccctgttctttgttgtcatgaaaggagactacgatgctctgctgccg
tggccgttcagacacaaggttacgtttatgttgcttgaccaaaataacagggaacatatt
attgatgcgtttcgcccagacttgacttctgcttcatttcagagacccgtgaatgacatg
aatgttgcgagcggctgccccctgttcctccctctgtccaaactgcagtcacctaaatat
gcctatgtgaaagaagacacacttttccttaaatgcattatagaaacaaaccagtaa
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