Caloenas nicobarica (Nicobar pigeon): 135997619
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Entry
135997619 CDS
T11056
Symbol
PUM1
Name
(RefSeq) pumilio homolog 1 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
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Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
DUF6922
Motif
Other DBs
NCBI-GeneID:
135997619
NCBI-ProteinID:
XP_065506409
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Position
23:complement(1639932..1703127)
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AA seq
1192 aa
AA seq
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MSVACVLKRKAVLWQDSFSPHLKQHAQDTANPTMPVVLTSGTGSQAQAQPPANQALAAGT
HSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAEH
QVRSMDELNHDFQALALEGRAMGEQLLPGKKFWESDDSSKDGPKGIFLGDQWRDSAWGTS
DHSVSQPIMVQRRPGQGFHVNSEVNSVLSPRSESGGLGVSMVEYVLSSSPGDSCLRKGGF
GPRDAENDENDKGDKKNKGTFDGDKLGDLKEEGDVMDKTNGLPVQNGIDADVKDFSRTPG
NCQNSASEVDLLGPNQNGSEGLAQLASTNGAKPVEDFSNMESQSVPLDPMEHVGMEPLQF
DYSGTQVPVDSSAATVGLFDYSSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIGMF
SAGLAPAAFVPNPYIISAAPPGTDPYAAGLAAAATLGPAVVPHQYYGVTPWGVYPASLFQ
QQAAAAAAATNSANQQSTQQTQQGQQQVLRGGASQRPLTPNQNQQGQQTDPLVAAAAVNS
ALAFGQGLAAGMPGYPVLAPAAYYDQTGALVVNTGARNGLGAPVRLVAPAPVIISSSAAQ
AAVAAAAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQQPTNNLASSSFYGNSLSSNSQ
SSSLFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSNTGSGSRRDSLTGSSDL
YKRTSSSLTPIGHSFYNGLGFSSSPGPVGMPLPSQGPGHSQTPPPSLSSHGSSSSLNLGG
LTNGSGRYISAAPGAEAKYRSASSASSLFSPSSTLFPSSRLRYGMSDVMPSGRSRLLEDF
RNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDV
FGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQVINEMV
RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL
EHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQ
HKFASNVVEKCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEP
AQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGII
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttgcgtgtgttttgaagagaaaagcagtactctggcaggactcgttcagcccc
cacctgaagcagcacgctcaagatacagctaatcccaccatgcctgttgtattgacatct
ggaacagggtcccaggctcaggcacagccgcccgcaaaccaggcgctggcggcggggacg
cactccagccctgtccccggatccatcggagtggcgggccgctcccaggacgacgccatg
gtggattatttcttccagaggcagcatggtgagcagcttgggggaggaggaagcggtgga
ggcggctataataacagcaaacatcgctggcctactggggataacattcatgcagagcat
caggtgcgttccatggatgaactgaatcatgattttcaagcgcttgctctggaaggacgg
gctatgggagagcagctgttgccgggtaaaaagttttgggaatctgatgattccagcaaa
gatggaccaaaagggatatttctgggagatcagtggagagacagtgcttggggaacatca
gatcactctgtttcccagcccattatggttcagagaagacctggtcaggggtttcatgtg
aatagtgaagtcaactcggtgctttccccacggtcagagagtggaggacttggcgttagc
atggtggagtatgtgttgagctcatctccgggagactcctgcctaaggaaaggaggattt
gggccaagggatgcagagaatgatgagaatgacaaaggggataagaaaaataagggcacg
tttgatggcgataaattaggagatctgaaggaggagggggatgtgatggataaaacaaat
ggtttgcctgtgcagaatgggattgacgcagatgtcaaagacttcagccgtacacccggt
aattgccagaactctgctagtgaagtcgatcttctggggccaaaccagaacggatcggag
ggtttggcccagctggcgagcactaatggtgccaaaccggtggaggatttctccaacatg
gagtcccagagcgtccctctggatcccatggagcacgtggggatggagccgctgcagttt
gattattctggcacccaagtacctgtggactcatccgcagcgaccgtggggctctttgat
tacagctcccagcagcagctgttccagagaccgaacgccctggccgttcagcagctgacg
gcggcgcagcagcagcagtacgccttggctgcggcccatcagccccacataggtatgttt
tcagcaggtttagcccctgctgcctttgtccccaatccgtacatcatcagcgccgctccg
ccaggaactgacccgtacgcagccggactcgcagcagctgccacgttaggcccggccgtg
gtccctcaccagtactatggagttacaccctggggagtttatcccgccagcctgttccag
cagcaagcggccgccgccgccgccgccaccaactctgccaaccagcagagcacgcagcaa
acccagcagggccagcagcaggttctccgcggaggagccagccagcgtcctctgaccccc
aaccagaaccagcagggccagcagaccgatccactggtggccgccgccgccgtcaactct
gcgctcgccttcggccaggggctggcggccgggatgccgggttaccccgtgctggctcct
gccgcttactacgaccaaaccggtgctctggtggtgaacacgggggccaggaacggcctg
ggcgcccccgtgcgcctggtggcccccgcccccgtcatcatcagctcctcggccgcgcag
gcagcggttgcagcggctgcggcttcagccaacggcgcagcgggtggcctggcaggaacg
acaaatggaccatttcgccctctgggaactcagcagccccagccccagccccagcagcag
cccaccaacaacctggcatccagctccttctacggcaactcgctcagcagcaattcccag
agcagctccctcttctcccagggctctgcccaacctgccaacacctccctgggcttcgga
agcagcagctctctcggtgccacgctgggctctgcgctgggaggctttgggacagcagtt
gcaaactccaacacgggcagcggctcccgccgagactccctgaccgggagcagcgacctg
tacaagaggacatccagcagtttgacacccatcggacacagtttttataacggccttggc
ttttcctcctctcccggccctgtggggatgcccctgcccagccaaggacccggccactcc
cagactccaccgccttccttatcttcacacggatcatcttcaagtttaaacctgggagga
ctcacgaatgggagcggccgctacatctctgctgctccgggagccgaagccaagtaccgc
agcgcgagcagcgcgtccagcctcttcagccccagcagcacgctcttcccctcctcccgc
ctgcgctatggcatgtccgacgtgatgccctccggccgaagcaggctgctggaagacttt
cgcaacaaccggtaccccaatttgcagctgagggagattgctgggcacatcatggagttc
tcacaggatcagcatgggtccaggtttattcagctgaaactggagcgtgctaccccagca
gaacgtcagcttgtgttcaatgagatcctccaggcagcttatcagttgatggtcgatgta
tttggaaattacgtcatccagaagtttttcgaatttggcagcctggaacagaagttggcc
ctggcagaacggatccgtgggcacgttctgtccctggctctgcagatgtacggctgtagg
gtgatccagaaggcccttgagttcattcctccagaccagcaggtaattaatgagatggta
cgggagctggacggccacgtcctcaagtgtgtgaaagaccagaacgggaaccacgtggtg
cagaagtgtattgagtgtgtgcagcctcagtccctgcagttcatcatcgatgcgtttaag
gggcaggtttttgcgttgtctacacatccgtacggctgccgtgtgatccagaggatcctc
gagcactgtcttcctgagcaaacccttcccatcttggaggaacttcaccaacacaccgag
cagcttgtgcaggatcagtatgggaactatgttatccagcatgtactagaacatggtcgg
cctgaggataagagcaagattgtagcagaaatcagaggcaacgtgctcgtgttgagtcaa
cataaatttgctagcaacgtggtggagaaatgcgtgactcacgcctcccgtacagagcgc
gccatgctgatcgatgaggtgtgcactatgaacgacggccctcacagtgccttatacacc
atgatgaaagatcagtacgccaactacgtggtacagaagatgatcgatgtggcagaacca
gcgcagcggaagattgtcatgcacaagatccggcctcacatcgctacgctgcgcaagtac
acctacggcaaacacattttggccaagctggagaaatactacatgaagaacggggtggac
ctggggccgatttgtgggccccccaacggcatcatctga
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