Caloenas nicobarica (Nicobar pigeon): 136000321
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Entry
136000321 CDS
T11056
Symbol
CAPN1
Name
(RefSeq) LOW QUALITY PROTEIN: calpain-1 catalytic subunit
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04141
Protein processing in endoplasmic reticulum
cnic04210
Apoptosis
cnic04217
Necroptosis
cnic04218
Cellular senescence
cnic04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
136000321 (CAPN1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
136000321 (CAPN1)
04217 Necroptosis
136000321 (CAPN1)
04218 Cellular senescence
136000321 (CAPN1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
136000321 (CAPN1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cnic01002
]
136000321 (CAPN1)
Enzymes [BR:
cnic01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
136000321 (CAPN1)
Peptidases and inhibitors [BR:
cnic01002
]
Cysteine peptidases
Family C2: calpain family
136000321 (CAPN1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_7
EF-hand_5
CAPN13-like_C_EFh
DUF6009
Motif
Other DBs
NCBI-GeneID:
136000321
NCBI-ProteinID:
XP_065510172
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All DBs
Position
32:complement(211055..226373)
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AA seq
714 aa
AA seq
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MSGPAAPLLCSGVSARVRRERARAEGLGRHEAALRFQGQDYLRLRRESRRAGRLFCDPAF
PPAPASLGFRELGPAGAKTRGVTWKRPTELCANPQFIVDGATRTDVCQGALGDCWLLAAI
ASLTLQPALLQRVVPPGQSCQRGYAGIFHFQIWQFGEWLDVVVDDLLPTKDGRLLFVHSA
EGSEFWSALLEKAYAKVNGCYEALAGGSTSEGFEDFTGGVTEWFDLRQPPPRLFGILQEA
LERGSLLGCSIDITSARDMETVTFKQLVKGHAYSVTGARQVPFRGQVLPLVRVRNPWGEV
EWTGPWSDSSAEWDAVEPALRQQLLVRMEDGEFWMAFRDFLREFTRLEICNLTPDALQSR
RFRAWNTQLFEGTWRRGSTAGGCRNYPATFWINPQFKIRLEEVDDADDEDGGAERGCSFL
LALMQKHRRRERRYGRDMETIGFAVYEVPPELEGQSGLHLKREFFLANASRARSEQFINL
REVSARLRLPPGEYLVVPSTFEPDREGDFVLRVFSEKRAGTEEMDDRIQATLPDEKVLSE
GEIDENFKQLFKQLAGPDMEISVAELQTILNRIIGKHKDLRTKGFSIESCRSMVNLMDKD
GNGKLGLVEFNVLWNRIRNYLAIFRKFDVDKSGSMSAYEMRLALEAAGYKLNQKLHQLII
TRYAEPDLALDFDSFVCCLVRLETMFRFFQAVDVDQDGVVTFDLLQWLQFTMFA
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggccccgccgcccccctgctctgctccggggtctccgctcgggtccggcgggag
cgcgcgcgcgcggaggggctgggccggcacgaggcggcgctgcggttccagggccaggac
tacttgcggctgcggagggagtcgcggcgcgccgggcggctgttctgcgaccccgcgttc
ccgcccgcgcccgcctccctcggcttccgcgagctcgggccggcgggcgctaagacccgg
ggggtcacctggaagcggcccacggagctgtgtgccaacccgcagttcatcgtggacggc
gccacccgcaccgacgtctgccagggcgcgctgggggactgctggctgctggcggccatc
gcgtcgctgacgctgcagccggcgctgctgcagcgggtggtgccgcccggccagagctgc
cagcgcggctacgccggcatcttccacttccagatctggcagttcggcgagtggctggac
gtggtggtggacgacctgctgcccaccaaggacgggcggctgctgttcgtgcactcggcc
gagggctccgagttctggtcggcgctgctggaaaaggcctacgccaaggtgaacggctgc
tacgaggcgctggcaggcggcagcacgtccgagggcttcgaggatttcaccggcggcgtc
accgaatggttcgacctgcgccagccgccgccgcggctgttcggcatcctgcaggaagcg
ctggagcgcgggtccctgctcggctgctccatcgacatcacgagcgcgcgggacatggag
accgtgaccttcaagcagctggtgaagggccacgcgtactcggtgacgggcgcccggcag
gtgccgttccgcgggcaggtgctgccgctggtccgcgtgcgcaacccctggggtgaggtg
gagtggacggggccctggagcgacagctcggctgagtgggacgcggtggagccggcgctg
cgccagcagctcctggtcaggatggaggacggcgagttctggatggcgttccgggatttc
ctgcgggagttcacgcgcctggagatctgcaacctgaccccggacgcgctgcagtcgcgc
cggttccgcgcctggaacacgcagctgttcgagggcacgtggcggcgcggcagcacggcc
ggcggctgccgcaactaccccgccactttctggatcaacccgcagttcaagatccggctg
gaggaggtggacgacgccgatgacgaggacggcggggccgagcgcggctgcagtttcctg
ctggcgctgatgcagaagcaccggcgccgcgagcgccgctacggcagggacatggagacc
atcggcttcgccgtctacgaggtccctcccgagctggaggggcagtcggggctgcacctg
aagcgcgagttcttcctggccaacgcgtcgcgcgcgcgctccgagcagttcatcaacctg
cgcgaggtgagcgcgcggctgcgcctgccgcccggcgagtacctggtggtgccgtccacc
ttcgagcccgaccgcgagggcgacttcgtgctgcgcgtcttctccgagaaacgggccggc
accgaggagatggacgacaggatccaggcgacgctgccggacgagaaagtgctctcggag
ggcgagatcgacgagaacttcaagcagctcttcaagcagctggcggggccggacatggag
atcagcgtcgcggagctccagaccatcctcaaccgcatcatcggcaaacataaagacctg
cgcaccaaaggcttcagcatcgagtcgtgccgcagcatggtcaacctcatggacaaagac
ggcaacggcaaactggggctggtggagttcaacgtgctgtggaaccgcatccgcaactac
ctggccattttccgcaaattcgatgtggacaagtcggggagcatgagtgcctacgagatg
cggctggcgctggaagccgcaggttacaaactgaaccagaagctgcaccagttgatcatc
acgcgctacgcggagcccgacctggcgctcgacttcgacagcttcgtctgctgcctcgtg
cgcctggaaaccatgttccggtttttccaggccgtggacgtggaccaggacggggtcgtc
accttcgacctgctgcagtggctccagttcaccatgtttgcctga
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